prot_H-paniculata_contig6981.14923.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6981.14923.1
Unique Nameprot_H-paniculata_contig6981.14923.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length424
Homology
BLAST of mRNA_H-paniculata_contig6981.14923.1 vs. uniprot
Match: A0A6H5JL50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL50_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 2.880e-38
Identity = 124/379 (32.72%), Postives = 178/379 (46.97%), Query Frame = 0
Query:   56 AQTGGREKSXXXXXXXXXXXXXXXKGTGLAGGNGSSKRMGAKAKTVTFVVHALISFVGMVVIPARLTWEMLIVRHSTGSSRNGSNDPVIFEEXXXXXXXAEGSREALSALHTTLSGAVAWKYVTHDGGDAPVEEDDAWVLVSERSHAVGIGGDHFGSSRGEG---RRRMQAEEEGGAVEGESFTYNAITQFYLCSNV-ADIPAEAMQAAVLEIFGVDESQIEVTLGTTN----AEFCGDRGIEEWLIRIANAGGGDQQSAADKSSEQVDLVRQDDFPDTMAKAIVSNDSGVAVAGTDLSYSSLGFLISFDDDQTPLTT-SDGLGDDFQPVLGPDQYWPWWCWLLFPLGVLAC-CPVAFCIYQNRPSSSGPPSPSGPAGG 424
            ++ GGR KS               +G+G     G  +  G +   + FV  A++SFVGMVV+P R+ +++L+              P +FE      XX                                                     D   SS+  G   RR +Q ++      G+SFTY + TQF LC+   +++  +A++A ++++F V++ Q E T GT       EFC D G EEW I I N    D QSAA  S+ Q++LVR  +F   +A ++   DS ++V    L+YSSLG+++ +D+DQ   T  SD L  DF    GPDQ+WPW   LLF L +L C CP+A CIY  RP  +GPPSPSG  GG
Sbjct:   50 SRRGGRNKSSNEDGQFWRCGGDQVRGSG-----GGKEGTGGRRPALVFVAQAVLSFVGMVVLPTRVAYDVLL-------------QPRVFESHRGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-DGLVSSKKAGWRSRRVLQTDD------GDSFTYTSRTQFDLCAAPGSELEEDALRAGIMDVFEVEQEQTEGTTGTVEKREVTEFCDD-GSEEWTIAIGNEPS-DTQSAAVISAGQMELVRSSEFTTLLASSL--EDSNLSVNPAGLTYSSLGYIVLYDEDQAVTTANSDSLDSDFVAFRGPDQWWPWXXXLLFGLVLLCCICPLAACIYYYRPGLAGPPSPSGAGGG 399          
BLAST of mRNA_H-paniculata_contig6981.14923.1 vs. uniprot
Match: D7FU95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU95_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.020e-21
Identity = 99/318 (31.13%), Postives = 144/318 (45.28%), Query Frame = 0
Query:  114 MVVIPARLTWEMLIVRHSTGSSRNGSNDPVIFEEXXXXXXXAEGSREALSALHTTLSGAVAWKYVTHDGGDAPVEEDDAWVLVSERSHAVGIGGDHFGSSRG-EGRRRMQAEEEGGAVEGESFTYNAITQFYLCSNV-ADIPAEAMQAAVLEIFGVDESQIEVTLGTTNA----EFCGDRGIEEWLIRIANAGGGDQQSAADKSSEQVDLVRQDDFPDTMAKAIVSNDSGVAVAGTDLSYSSLGFLISFDDDQT-PLTTSDGLGDDFQPVLGPDQYWPWWCWLLFPLGVLACCPVAFCIYQNRPSSSGPPSPSGPAGG 424
            MVV+P R+ +E+L+      S R     P++             +  A SA  T +      K  T +GG      D       +   + G  G       G  GRR +Q ++ G      SFTY   TQF LC+   +++  +A++A ++++F V++ Q E T GT       EFC D G EEW I I N    D QSAA  S+ Q++LVR  +F   +A ++   DS + V    L+YSSLG+++ +D++Q      SD L  DF    GPDQ+WP                            +GPPSPSG  GG
Sbjct:    1 MVVLPTRVAYEVLLQPPVFESHRGEPPPPLV--SLAVPSATGSAASTAGSASRTLV------KEGTGEGGGRRRLSD----FSRDGGGSDGSDGLILSKKAGWRGRRVLQTDDSG------SFTYTTRTQFDLCAAPGSELEEDALRAGIMDVFEVEQEQTEGTAGTVEKREVMEFCDD-GSEEWTIAIGNEPS-DTQSAAVISAGQMELVRSSEFTTLLAASL--EDSNLTVDPAGLTYSSLGYIVLYDEEQAVTAANSDSLDSDFVAFRGPDQWWP--------------------------GHAGPPSPSGAGGG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6981.14923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JL50_9PHAE2.880e-3832.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU95_ECTSI1.020e-2131.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 383..406
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..382
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 407..424
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 382..404
NoneNo IPR availableTMHMMTMhelixcoord: 101..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6981contigH-paniculata_contig6981:2125..11170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6981.14923.1mRNA_H-paniculata_contig6981.14923.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6981 2037..11170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6981.14923.1 ID=prot_H-paniculata_contig6981.14923.1|Name=mRNA_H-paniculata_contig6981.14923.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=424bp
MGRSTIGDAILPEHVRSSAVKAAGVLRAHQQTHGLENTGAICKTNPEFDY
SVDREAQTGGREKSSSSSSSHYHQRQQQRKGTGLAGGNGSSKRMGAKAKT
VTFVVHALISFVGMVVIPARLTWEMLIVRHSTGSSRNGSNDPVIFEEAAA
AAAAAEGSREALSALHTTLSGAVAWKYVTHDGGDAPVEEDDAWVLVSERS
HAVGIGGDHFGSSRGEGRRRMQAEEEGGAVEGESFTYNAITQFYLCSNVA
DIPAEAMQAAVLEIFGVDESQIEVTLGTTNAEFCGDRGIEEWLIRIANAG
GGDQQSAADKSSEQVDLVRQDDFPDTMAKAIVSNDSGVAVAGTDLSYSSL
GFLISFDDDQTPLTTSDGLGDDFQPVLGPDQYWPWWCWLLFPLGVLACCP
VAFCIYQNRPSSSGPPSPSGPAGG
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