prot_H-paniculata_contig698.14919.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig698.14919.1
Unique Nameprot_H-paniculata_contig698.14919.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length242
Homology
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BLAST of mRNA_H-paniculata_contig698.14919.1 vs. uniprot
Match: A0A6H5KLC2_9PHAE (FHA_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC2_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 2.020e-65
Identity = 132/270 (48.89%), Postives = 157/270 (58.15%), Query Frame = 0 
Query:   19 PPRRADTPCPAALL---QQQPATVGEAQCYRRGGNGSRSLGNSISGSAAFVLLPDGGFANRRYIELGAGTT-VVGRCKSSGIRDHHVSRRHVEVTVPEEGKDGSTEGCCRIKYIGRNCRVVLVGGVLLKAEQEVMAPPGTQVILNFNNKGLPRYSYTLVPAHRLPFLT---ATMTMGRRVA-SGNASRWRGT------------------------GPSQCRINKRPTR----------------FRKEAQDKLQQERDEIFSRFADLKF 240
            P RRA TPCPAAL    QQQ  ++G                         +LLPD    +RR+I L  GTT VVGRCK SGIRDHHVSRRHVE+T PEEG +G  +G CRIKYIGRNCRVVL+GG+LLK+ QEV A PGT+V+LN+NNKGLPRYSYTL+PA+ LP  T   A  ++G   A +G+   WRG                         G +      RP+R                FRKEAQ+KLQ+ERDEIFS+FADLKF
Sbjct:   50 PIRRAGTPCPAALRWRRQQQDGSIGR-----------------------LILLPDRAETSRRFIPLEPGTTTVVGRCKKSGIRDHHVSRRHVEITAPEEGDEGFAQGHCRIKYIGRNCRVVLIGGILLKSGQEVPAAPGTRVVLNYNNKGLPRYSYTLLPANNLPATTPRTAHCSVGMGAAGAGDGRPWRGGPVSSSHRLGDSDMEMGSGRKQPFHGDAHLHAYNRPSRYSTIASKQQRPRPGGRFRKEAQEKLQKERDEIFSKFADLKF 296
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig698.14919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLC2_9PHAE2.020e-6548.89FHA_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.200.20coord: 66..171
e-value: 4.0E-7
score: 31.8
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 66..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig698contigH-paniculata_contig698:2515..10628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig698.14919.1mRNA_H-paniculata_contig698.14919.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig698 2429..10875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig698.14919.1 ID=prot_H-paniculata_contig698.14919.1|Name=mRNA_H-paniculata_contig698.14919.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=242bp
MALTVMDVVDWQPEKTVEPPRRADTPCPAALLQQQPATVGEAQCYRRGGN
GSRSLGNSISGSAAFVLLPDGGFANRRYIELGAGTTVVGRCKSSGIRDHH
VSRRHVEVTVPEEGKDGSTEGCCRIKYIGRNCRVVLVGGVLLKAEQEVMA
PPGTQVILNFNNKGLPRYSYTLVPAHRLPFLTATMTMGRRVASGNASRWR
GTGPSQCRINKRPTRFRKEAQDKLQQERDEIFSRFADLKFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008984SMAD_FHA_dom_sf