mRNA_H-paniculata_contig6971.14916.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6971.14916.1
Unique NamemRNA_H-paniculata_contig6971.14916.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Match: D8LRS6_ECTSI (Heme O synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRS6_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 8.140e-105
Identity = 160/204 (78.43%), Postives = 182/204 (89.22%), Query Frame = 1
Query:    1 RTWGAEVKHRLQVYSQLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSACVGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGSGTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGAVPPLMGWAAATGGEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGGFKMV 612
            RT  AE  H +++YSQLSK+RLSALVM TTSAGYLAAGGPV+ ++L+SACVGTML+S +ANTFN VIET+ND+RM RTR RPLPSGRISR  ALGWG  SGTAGI VLAAGSNP+TA LGAANLLLYVGPYTLSK R+E+NTW+GS+VGAVPPLMGWAAATG E+ AVEP+L+A YLF+WQFPHFFSLAW+HREDYARGGF MV
Sbjct:   46 RTVVAEAGHLMKLYSQLSKHRLSALVMSTTSAGYLAAGGPVDALALTSACVGTMLASSSANTFNQVIETANDARMHRTRARPLPSGRISRQHALGWGVASGTAGITVLAAGSNPLTATLGAANLLLYVGPYTLSKTRSEINTWVGSVVGAVPPLMGWAAATG-ELVAVEPLLLATYLFMWQFPHFFSLAWLHREDYARGGFAMV 248          
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Match: A0A7S3XHY7_HETAK (Heme O synthase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XHY7_HETAK)

HSP 1 Score: 254 bits (650), Expect = 3.320e-81
Identity = 124/190 (65.26%), Postives = 156/190 (82.11%), Query Frame = 1
Query:   43 SQLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSACVGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGSGTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGAVPPLMGWAAATGGEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGGFKMV 612
            ++LSK RLSALV+FTTSAGYLAAGGPV+ V+ S+ACVGT L++ +A+TFN VIE  NDS MKRT NRPLPSGRIS+S A+ WG  +     A+LAAG++PVT ALG +N+ LY  PYTLSK RTE NTWIGS+VGA+PP+MGW AATGG++A+ +P L+ A LF WQFPHF +L+W++R+DYARGGF M+
Sbjct:   64 AELSKARLSALVVFTTSAGYLAAGGPVDPVTFSAACVGTSLAAASASTFNQVIEIKNDSMMKRTCNRPLPSGRISKSNAIKWGLSTAGVSGAILAAGTDPVTTALGLSNIFLYSVPYTLSKTRTEANTWIGSVVGAIPPMMGWTAATGGDLASADPWLLGALLFYWQFPHFLALSWMYRKDYARGGFAMI 253          
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Match: W7U0I5_9STRA (Heme O synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0I5_9STRA)

HSP 1 Score: 238 bits (608), Expect = 6.900e-74
Identity = 121/195 (62.05%), Postives = 151/195 (77.44%), Query Frame = 1
Query:   43 SQLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSACVGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGSGTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGAVPPLMGWAAATG-----GEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGGFKMV 612
            ++L K RLSALV+ TTS+G+LAAGGPV  +  ++  VGTML++C+ANTFN ++ET ND RMKRT  RPLPSGR SR  AL W  GS  A  AVL AG+NP+T ALG  NL LY  PYTLSK R+E NTWIG+LVGAVPPLMGWAAAT        +++ + +L+A+ LF+WQFPHFF+L+W+HR+DYARGGF+MV
Sbjct:   47 AELGKARLSALVVLTTSSGFLAAGGPVAWLPFTAVSVGTMLAACSANTFNQLLETDNDKRMKRTHLRPLPSGRASRPFALAWAVGSAGASAAVLTAGTNPLTTALGMGNLALYALPYTLSKTRSEANTWIGALVGAVPPLMGWAAATDCASLTSLLSSPDAVLLASILFLWQFPHFFALSWVHRKDYARGGFQMV 241          
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Match: A0A7R9UA84_9STRA (Heme O synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA84_9STRA)

HSP 1 Score: 224 bits (571), Expect = 9.670e-69
Identity = 116/195 (59.49%), Postives = 149/195 (76.41%), Query Frame = 1
Query:   28 RLQVYSQLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSACVGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGSGTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGAVPPLMGWAAATGGEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGGFKMV 612
            +LQVYS+LSK RLSALV+ TT+AG+L+AG PV + +++ AC GT L++ AA+ FN ++E   D+RM RTR RPLPSGR SR +A    + +  A +A+L  G NP TAALGA N+ LY   YT SKP TE NTWIG+LVGA+PP+MG+ AATG +V + E + +A  LF+WQFPHFFSLAWIHR+DYARGGF+MV
Sbjct:   61 KLQVYSELSKARLSALVVSTTAAGFLSAGAPVCLSTMALACAGTSLAAGAASCFNQIVERDRDARMVRTRLRPLPSGRASRDEAFALASTASLASVAILYIGVNPATAALGAGNIFLYSVAYTQSKPVTEWNTWIGALVGAIPPVMGYCAATG-DVLSGESLFLATSLFLWQFPHFFSLAWIHRKDYARGGFQMV 254          
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Match: H3GG45_PHYRM (Protoheme IX farnesyltransferase, mitochondrial n=19 Tax=Phytophthora TaxID=4783 RepID=H3GG45_PHYRM)

HSP 1 Score: 217 bits (553), Expect = 1.980e-65
Identity = 112/198 (56.57%), Postives = 147/198 (74.24%), Query Frame = 1
Query:   19 VKHRLQVYSQLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSACVGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGSGTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGAVPPLMGWAAATGGEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGGFKMV 612
            +K RL++YSQLSK RLSALV+ TT AG+L AGGP+   + ++A VGT L++ +ANTFN   E   D++M+RT  RPLPSGRI+R  AL +GA + TA  A+LAAG +P+ A+LGA N+ LY   YT  K ++ELNTW+GS+VGA+PPLMGWAAATG  + A E  L A  ++ WQ PHFF+L+W  R+DY RGG+KMV
Sbjct:   68 LKERLEIYSQLSKARLSALVVMTTGAGFLMAGGPISWGTFAAATVGTSLAAASANTFNQCWEVELDAKMQRTHRRPLPSGRITRPHALAFGAATATASTAILAAGCSPLVASLGAVNIGLYALVYTPMKMKSELNTWVGSVVGAIPPLMGWAAATG-TILAPEAALHAYLMYCWQMPHFFALSWRSRKDYGRGGYKMV 264          
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Match: A0A662XZN3_9STRA (Protoheme IX farnesyltransferase, mitochondrial n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZN3_9STRA)

HSP 1 Score: 216 bits (551), Expect = 4.780e-65
Identity = 114/198 (57.58%), Postives = 147/198 (74.24%), Query Frame = 1
Query:   19 VKHRLQVYSQLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSACVGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGSGTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGAVPPLMGWAAATGGEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGGFKMV 612
            +K R+++YSQLSK RLSALV+ TT AG+L AGGP+   + ++A VGT L++ +ANTFN   E   D++M+RT  RPLPSGRI+R  AL +GA +  A  A+LAAG +P+ A+LGA N+ LY   YT  K R+ELNTW+GSLVGA+PPLMGWAAATG  + A E  L A  +F WQ PHFF+L+W  R+DYARGG+KMV
Sbjct:   75 LKDRMEIYSQLSKARLSALVVMTTGAGFLMAGGPISWGTFAAATVGTSLAAASANTFNQCWEVELDAKMQRTHRRPLPSGRITRQHALTFGAATAAASTAILAAGCSPLVASLGAFNIGLYSLVYTPMKMRSELNTWVGSLVGAIPPLMGWAAATG-TLLAPEAALHAYLMFCWQMPHFFALSWRSRKDYARGGYKMV 271          
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Match: A0A3M6VNS3_9STRA (Protoheme IX farnesyltransferase, mitochondrial n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNS3_9STRA)

HSP 1 Score: 216 bits (549), Expect = 8.220e-65
Identity = 112/198 (56.57%), Postives = 147/198 (74.24%), Query Frame = 1
Query:   19 VKHRLQVYSQLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSACVGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGSGTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGAVPPLMGWAAATGGEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGGFKMV 612
            +K RL +YSQL K RLSALV+ TT AG+L AGGP+   + ++A VGT L++ +ANTFN   E   D++M+RT  RPLPSGRIS+S AL +GA +GTA  AVLA G +P+ A+LG  N+ LY   YT  K ++ELNTW+GS+VGA+PP+MGWAAATG  + A E  L+A  ++ WQ PHFF+L+W  R+DYARGG+KMV
Sbjct:   68 LKDRLTIYSQLGKARLSALVVMTTGAGFLMAGGPISWCTFAAATVGTSLAAVSANTFNQSWEVELDAKMQRTHRRPLPSGRISQSHALTFGAATGTASAAVLAVGCSPLVASLGVLNIGLYSLVYTPMKMKSELNTWVGSVVGAIPPIMGWAAATG-TIMAPEAALLAYLMYCWQMPHFFALSWRSRKDYARGGYKMV 264          
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Match: A0A7R9YX60_9STRA (Heme O synthase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YX60_9STRA)

HSP 1 Score: 214 bits (545), Expect = 5.110e-64
Identity = 105/189 (55.56%), Postives = 138/189 (73.02%), Query Frame = 1
Query:   46 QLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSACVGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGSGTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGAVPPLMGWAAATGGEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGGFKMV 612
            +LSK +LSALV+ T++AG+LAAGGP+   +L++  VGT L S +A+TFN + E   D RMKRTRNRPL  G +S   A      SG  G  +L AG++PVTAALG AN+ LY G YT  K ++E+NTW+G++VGAVPP+MGW AATGG +  +E   +   LF+WQFPHFF+L+W+HR DYARGGF+MV
Sbjct:  116 ELSKAKLSALVVSTSTAGFLAAGGPISYPTLAACAVGTALCSSSASTFNQIFEVERDRRMKRTRNRPLVKGVVSPGSAAALATASGVGGGVILLAGTDPVTAALGVANIGLYAGAYTALKTKSEINTWVGAVVGAVPPVMGWTAATGGSLLDLEAAFLGGTLFLWQFPHFFALSWMHRVDYARGGFQMV 304          
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Match: A0A0M0JP87_9EUKA (Heme O synthase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JP87_9EUKA)

HSP 1 Score: 211 bits (537), Expect = 1.040e-63
Identity = 106/189 (56.08%), Postives = 144/189 (76.19%), Query Frame = 1
Query:   46 QLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSACVGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGSGTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGAVPPLMGWAAATGGEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGGFKMV 612
            +LSK RLSALV+ +T+AG+L + GP+++ SL+SA  GT L + +AN+FN +IET ND+ M RT  RPLPSGRISR  A+GW + SG AG+A LA G+N +T ALGAA L LY   YT  K RT LNTW+G++VGA+PP+MGW AA GG +  +E  ++ + LF+WQ PHFF+L+W++R DYA+GG++MV
Sbjct:    2 ELSKSRLSALVVGSTAAGHLMSSGPLDLTSLASALGGTFLLAGSANSFNQIIETRNDAAMNRTHKRPLPSGRISRPHAIGWASASGAAGLATLALGTNCMTTALGAATLGLYTLAYTPMKQRTPLNTWVGAVVGAIPPVMGWTAA-GGGLLTLEAAVLGSSLFLWQMPHFFALSWMYRSDYAQGGYQMV 189          
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Match: A0A8K1CPL5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPL5_PYTOL)

HSP 1 Score: 212 bits (540), Expect = 1.600e-63
Identity = 112/198 (56.57%), Postives = 142/198 (71.72%), Query Frame = 1
Query:   19 VKHRLQVYSQLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSACVGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGSGTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGAVPPLMGWAAATGGEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGGFKMV 612
            +K RL +Y +LSK RLSALV+ TT AG+L AGGP+   S ++A VGT L++ +ANTFN   E   D++M+RT  RPLPSGRISRS AL +GA +      +LAAG NP+ A+LG  N+ LY   YT  K R+ELNTW+GS+VGA+PP+MGWAAATG  +A  E  L A  LF WQ PHFF+L+W  R DYARGG++MV
Sbjct:   64 LKERLGIYKELSKARLSALVVMTTGAGFLMAGGPISWGSFAAATVGTSLAAASANTFNQAWEIELDAKMQRTHKRPLPSGRISRSHALAFGATTAAVSTGILAAGCNPLVASLGLFNIGLYSLVYTPMKTRSELNTWVGSVVGAIPPIMGWAAATGSALAP-EAALHAYLLFCWQMPHFFALSWRSRNDYARGGYQMV 260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6971.14916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRS6_ECTSI8.140e-10578.43Heme O synthase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A7S3XHY7_HETAK3.320e-8165.26Heme O synthase (Fragment) n=1 Tax=Heterosigma aka... [more]
W7U0I5_9STRA6.900e-7462.05Heme O synthase n=2 Tax=Monodopsidaceae TaxID=4250... [more]
A0A7R9UA84_9STRA9.670e-6959.49Heme O synthase n=1 Tax=Pinguiococcus pyrenoidosus... [more]
H3GG45_PHYRM1.980e-6556.57Protoheme IX farnesyltransferase, mitochondrial n=... [more]
A0A662XZN3_9STRA4.780e-6557.58Protoheme IX farnesyltransferase, mitochondrial n=... [more]
A0A3M6VNS3_9STRA8.220e-6556.57Protoheme IX farnesyltransferase, mitochondrial n=... [more]
A0A7R9YX60_9STRA5.110e-6455.56Heme O synthase n=1 Tax=Pseudictyota dubia TaxID=2... [more]
A0A0M0JP87_9EUKA1.040e-6356.08Heme O synthase n=1 Tax=Chrysochromulina tobinii T... [more]
A0A8K1CPL5_PYTOL1.600e-6356.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6971contigH-paniculata_contig6971:11000..11623 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score320.9
Seed ortholog evalue4.5e-85
Seed eggNOG ortholog2880.D8LRS6
Preferred nameCOX10
KEGG rclassRC01786
KEGG koko:K02257,ko:K09008,ko:K22072
KEGG ReactionR07411
KEGG Pathwayko00190,ko00860,ko01100,ko01110,ko04714,map00190,map00860,map01100,map01110,map04714
KEGG ModuleM00154
Hectar predicted targeting categoryother localisation
GOsGO:0000266,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004311,GO:0004518,GO:0004519,GO:0004659,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005829,GO:0006091,GO:0006119,GO:0006123,GO:0006139,GO:0006163,GO:0006464,GO:0006725,GO:0006753,GO:0006778,GO:0006779,GO:0006783,GO:0006784,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008495,GO:0008535,GO:0009058,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009451,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016070,GO:0016310,GO:0016740,GO:0016765,GO:0016787,GO:0016788,GO:0017004,GO:0017144,GO:0018130,GO:0018342,GO:0018343,GO:0019438,GO:0019538,GO:0019637,GO:0019646,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032991,GO:0033013,GO:0033014,GO:0034622,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0042773,GO:0042775,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046034,GO:0046148,GO:0046160,GO:0046483,GO:0048285,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0070069,GO:0071704,GO:0071840,GO:0072521,GO:0090304,GO:0090305,GO:0097159,GO:0097354,GO:1901135,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.heme o metabolic process
EggNOG OGsCOG0109@1,KOG1380@2759
EC2.5.1.141
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006,ko03029
Exons1
Model size624
Cds size624
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930838.7661202-CDS-H-paniculata_contig6971:10999..116231622930838.7661202-CDS-H-paniculata_contig6971:10999..11623Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6971 11000..11623 +
1691481475.4310904-CDS-H-paniculata_contig6971:10999..116231691481475.4310904-CDS-H-paniculata_contig6971:10999..11623Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6971 11000..11623 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6971.14916.1prot_H-paniculata_contig6971.14916.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6971 11000..11623 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6971.14916.1

>prot_H-paniculata_contig6971.14916.1 ID=prot_H-paniculata_contig6971.14916.1|Name=mRNA_H-paniculata_contig6971.14916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp
RTWGAEVKHRLQVYSQLSKYRLSALVMFTTSAGYLAAGGPVEVVSLSSAC
VGTMLSSCAANTFNHVIETSNDSRMKRTRNRPLPSGRISRSQALGWGAGS
GTAGIAVLAAGSNPVTAALGAANLLLYVGPYTLSKPRTELNTWIGSLVGA
VPPLMGWAAATGGEVAAVEPMLMAAYLFIWQFPHFFSLAWIHREDYARGG
FKMVRAI*
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mRNA from alignment at H-paniculata_contig6971:11000..11623+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6971.14916.1 ID=mRNA_H-paniculata_contig6971.14916.1|Name=mRNA_H-paniculata_contig6971.14916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=624bp|location=Sequence derived from alignment at H-paniculata_contig6971:11000..11623+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCACTTGGGGAGCAGAGGTAAAACATCGATTGCAGGTGTACTCGCAGCT GTCTAAATATAGATTGAGTGCGCTGGTGATGTTCACAACTTCTGCGGGAT ACCTGGCAGCTGGAGGACCTGTGGAAGTAGTTTCCCTGTCATCCGCCTGC GTGGGCACGATGCTCTCGTCTTGCGCGGCCAACACGTTCAACCATGTCAT CGAAACCTCCAACGATTCCCGAATGAAACGCACACGTAACCGTCCTTTAC CGTCCGGAAGAATATCCCGTTCTCAAGCATTGGGATGGGGAGCGGGATCA GGCACTGCCGGTATTGCAGTACTTGCCGCTGGCTCAAACCCTGTCACGGC TGCGCTCGGTGCCGCGAATCTATTACTGTACGTCGGGCCGTACACGCTGT CCAAACCTAGAACGGAGCTCAATACGTGGATTGGATCTCTTGTCGGGGCT GTGCCACCTTTGATGGGATGGGCAGCAGCAACTGGGGGTGAGGTAGCTGC GGTGGAACCGATGCTAATGGCGGCATACCTTTTCATCTGGCAATTTCCGC ATTTCTTCTCGCTGGCTTGGATACATCGTGAGGACTACGCCCGAGGTGGT TTCAAGATGGTACGTGCTATATAG
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Coding sequence (CDS) from alignment at H-paniculata_contig6971:11000..11623+

>mRNA_H-paniculata_contig6971.14916.1 ID=mRNA_H-paniculata_contig6971.14916.1|Name=mRNA_H-paniculata_contig6971.14916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at H-paniculata_contig6971:11000..11623+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCACTTGGGGAGCAGAGGTAAAACATCGATTGCAGGTGTACTCGCAGCT
GTCTAAATATAGATTGAGTGCGCTGGTGATGTTCACAACTTCTGCGGGAT
ACCTGGCAGCTGGAGGACCTGTGGAAGTAGTTTCCCTGTCATCCGCCTGC
GTGGGCACGATGCTCTCGTCTTGCGCGGCCAACACGTTCAACCATGTCAT
CGAAACCTCCAACGATTCCCGAATGAAACGCACACGTAACCGTCCTTTAC
CGTCCGGAAGAATATCCCGTTCTCAAGCATTGGGATGGGGAGCGGGATCA
GGCACTGCCGGTATTGCAGTACTTGCCGCTGGCTCAAACCCTGTCACGGC
TGCGCTCGGTGCCGCGAATCTATTACTGTACGTCGGGCCGTACACGCTGT
CCAAACCTAGAACGGAGCTCAATACGTGGATTGGATCTCTTGTCGGGGCT
GTGCCACCTTTGATGGGATGGGCAGCAGCAACTGGGGGTGAGGTAGCTGC
GGTGGAACCGATGCTAATGGCGGCATACCTTTTCATCTGGCAATTTCCGC
ATTTCTTCTCGCTGGCTTGGATACATCGTGAGGACTACGCCCGAGGTGGT
TTCAAGATGGTACGTGCTATATAGCGCACTTGGGGAGCAGAGGTAAAACA
TCGATTGCAGGTGTACTCGCAGCTGTCTAAATATAGATTGAGTGCGCTGG
TGATGTTCACAACTTCTGCGGGATACCTGGCAGCTGGAGGACCTGTGGAA
GTAGTTTCCCTGTCATCCGCCTGCGTGGGCACGATGCTCTCGTCTTGCGC
GGCCAACACGTTCAACCATGTCATCGAAACCTCCAACGATTCCCGAATGA
AACGCACACGTAACCGTCCTTTACCGTCCGGAAGAATATCCCGTTCTCAA
GCATTGGGATGGGGAGCGGGATCAGGCACTGCCGGTATTGCAGTACTTGC
CGCTGGCTCAAACCCTGTCACGGCTGCGCTCGGTGCCGCGAATCTATTAC
TGTACGTCGGGCCGTACACGCTGTCCAAACCTAGAACGGAGCTCAATACG
TGGATTGGATCTCTTGTCGGGGCTGTGCCACCTTTGATGGGATGGGCAGC
AGCAACTGGGGGTGAGGTAGCTGCGGTGGAACCGATGCTAATGGCGGCAT
ACCTTTTCATCTGGCAATTTCCGCATTTCTTCTCGCTGGCTTGGATACAT
CGTGAGGACTACGCCCGAGGTGGTTTCAAGATGGTACGTGCTATATAG
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