mRNA_H-paniculata_contig6971.14914.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig6971.14914.1
Unique Name	mRNA_H-paniculata_contig6971.14914.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 4.170e-83
Identity = 135/242 (55.79%), Postives = 166/242 (68.60%), Query Frame = 1

Query:  199 MRAPAVLRSLPVQLAVATKSPWVYTVQGVNPDAILHPPGRLS--SLRGEFTSPESLNFELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTVW 918
            MR+ A  R L  QL+VAT SPWV+   GV+P + +HPP R    SLRGE+ SP S N ELP  G PE+AF GRSN GKSTL+GK++G  KLVR SK PGCTKT+N+FALR  GA  PQ++LVDLPGYGFARE + AVR W   V  YL+ R  +VLRR FVLVD RHGLQ  D  +LS L    V   ++LTKVDK  PA L++++EG  Q  + H +  P+VHC+SA  G GM E  NT++
Sbjct:    1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTLY 242

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BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.930e-61
Identity = 103/237 (43.46%), Postives = 154/237 (64.98%), Query Frame = 1

Query:  250 TKSPWVYTVQGVNPDAILHPPGR-----LSSLRGEFTSPESLNFELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFAL-------RGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTVWHL 924
            TKSPWV+T++G++ D+ +H           +++  F  P    F+LP+ G PE+AF GRSN GKSTL+G +I  +KLVR SK+PGCT+T+N+F L       +G        Y+VDLPGYGFA+   + V+ W A V G++  R C +LRR FVL+D RHG+++ D  +++ LD+ GVS QI+LTK D++    +   VEGV ++   H +C+PVVH VSAR G G+ +L +T++++
Sbjct:    3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTIYYV 239

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BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A061QDS3_9PROT (Probable GTP-binding protein EngB n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A061QDS3_9PROT)

HSP 1 Score: 157 bits (398), Expect = 1.800e-41
Identity = 85/186 (45.70%), Postives = 111/186 (59.68%), Query Frame = 1

Query:  370 LPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTVWHLC 927
            LP  G PELAFAGRSN GKS+LI  + G + L RTS  PG T+ +NFF L   G  P    LVDLPGYG+A+  R  V+ W   +R YL+ R    L+R  VL+DSRHG++  DR I+  LDE+ VS QI+LTK+DK+        ++ V Q   +  +C P +H  SA  G G+AEL   +   C
Sbjct:   42 LPAPGHPELAFAGRSNVGKSSLINALTGRNTLARTSNTPGRTQELNFFRL---GVDPRPLILVDLPGYGYAKVTRSKVKAWTGTIRDYLRGR--QTLKRVMVLIDSRHGIKDNDREIMKMLDEAAVSYQIVLTKLDKLSRTDQSLIIDKVNQQARVFVACHPHIHATSAEKGTGIAELRADIARFC 222

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BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A2W4KWF0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KWF0_9PROT)

HSP 1 Score: 157 bits (396), Expect = 3.820e-41
Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 1

Query:  370 LPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTVWHLC 927
            LP   RPE+AFAGRSN GKS+LI  ++G + L RTS  PG T+ +NFFA           YLVD+PGYGFA+  +E V+ W  +VR YL+ RP   L+R F+L+DSRHG++  DR I+  LDE+ VS QI+LTK DK     L   +    +++  H + +P +   SA  G G+  L  T+  LC
Sbjct:   45 LPDADRPEIAFAGRSNVGKSSLINALVGQNGLARTSNTPGRTQELNFFATANVAL-----YLVDMPGYGFAQAPKEKVKAWTELVRNYLRGRP--TLKRVFLLIDSRHGIKSNDREIMEMLDEAAVSYQIVLTKADKPNLRQLRSVITATYETIASHPAAYPEILVTSAEKGQGIDVLRATIAELC 223

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BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH)

HSP 1 Score: 158 bits (400), Expect = 3.850e-41
Identity = 84/199 (42.21%), Postives = 122/199 (61.31%), Query Frame = 1

Query:  316 RLSSLRGEFTSPESLNFELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFAL-RGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLL-KAVEGVCQ-SLLLHQSCFPVVHCVSARTGLGMAEL 903
            ++ SL   +  P   N +LP  GRPE+AF GRSN GKS+L+  ++GT  L+R SK+PGCT T+N++AL +G        YL+D+PGYGFA+  ++  ++W  +V  YL  R   +LRR FVL+DSR G+Q  D  ++  L+ + +  Q++LTK D V    +  K  E  C  S   + SC P+VH VSA  GLG+ +L
Sbjct:   67 KIFSLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAKGSALDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLEDL 265

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BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A2E1XCC7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Parvularcula sp. TaxID=1979207 RepID=A0A2E1XCC7_9PROT)

HSP 1 Score: 155 bits (393), Expect = 7.310e-41
Identity = 83/178 (46.63%), Postives = 112/178 (62.92%), Query Frame = 1

Query:  370 LPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAEL 903
            LP  G  E+AFAGRSN GKSTL+  + G + L R S  PG T+ IN+F L G         LVDLPGYG+A+  R+ V  W A+ R +L+ R  +VLRR  VLVDSRHGL++ DR ++  LDE+ V+ QI+LTK DK++P  L K +E   Q ++   +  P+V   S+  G G+AEL
Sbjct:   36 LPDEGPAEVAFAGRSNVGKSTLLNALTGQNGLARASNTPGRTREINYFDLEG------AMRLVDLPGYGYAKASRKDVERWTALTRDFLRGR--SVLRRVCVLVDSRHGLKQTDREVMDLLDEAAVNYQIVLTKTDKIKPTALEKLIEATGQQIMKRPAAHPIVRATSSEKGDGIAEL 205

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BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: UPI0012E7BCFD (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Sphingomonas profundi TaxID=2681549 RepID=UPI0012E7BCFD)

HSP 1 Score: 154 bits (390), Expect = 2.360e-40
Identity = 91/207 (43.96%), Postives = 122/207 (58.94%), Query Frame = 1

Query:  316 RLSSLRGEFTSP-------ESLNFELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTV 915
            R+ + R  F  P        SLNF LP     E+AFAGRSN GKS+L+  + G + L RTS  PG T+ +NFF    D   PP   LVD+PGYGFA+  ++ VR+W  +V  YL+ RP  VL+RA VLVDSRHGL+  DR ++  LD++ VS +++LTK DKV+ + L    E        H +  P +   S+ TGLG+AEL   V
Sbjct:   17 RIEAARRLFAGPVAFLKSAPSLNF-LPDAAASEVAFAGRSNVGKSSLLNALTGRNALARTSNTPGRTQELNFF----DVGEPPAFRLVDMPGYGFAKAPKDVVRKWKFLVNDYLRGRP--VLKRALVLVDSRHGLKDVDRELMDMLDKAAVSYRLVLTKADKVKASDLAAVTEATAAEARRHVAAHPEILVTSSETGLGIAELRAAV 216

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BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A2U1W0M8_9PROT (Probable GTP-binding protein EngB n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1W0M8_9PROT)

HSP 1 Score: 154 bits (390), Expect = 2.430e-40
Identity = 87/179 (48.60%), Postives = 113/179 (63.13%), Query Frame = 1

Query:  367 ELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAEL 903
            +LP    PE+AFAGRSN GKS+LI  + G   L RTS  PG T+ +NFF L G      +  LVD+PGYG+A+E ++ V  W  +VR +LK R   VLRRA VL+DSRHGL+  D+ IL+ LD++ V  QI+LTK DKV+P  L         +L  H + FP VH  S+  GLG+AEL
Sbjct:   42 QLPEATLPEVAFAGRSNVGKSSLINALTGRRTLARTSNTPGRTQQLNFFDLGG------RLRLVDMPGYGYAKEAKDKVEAWNTLVRRFLKGRV--VLRRALVLIDSRHGLKPNDQEILTMLDQAAVPYQIVLTKADKVKPQALENIRIQTLAALKKHPAAFPEVHVTSSDKGLGIAEL 212

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BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A6C1SS75_9PROT (Probable GTP-binding protein EngB n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6C1SS75_9PROT)

HSP 1 Score: 154 bits (389), Expect = 4.760e-40
Identity = 82/179 (45.81%), Postives = 108/179 (60.34%), Query Frame = 1

Query:  367 ELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAEL 903
            ++P    PE+AFAGRSN GKS+L+  ++G   L RTS  PG T+ +NFF L        +  L DLPGYGFA+  ++ V  W A+V+ YLK RP   LRRA +L+D+RHG++  DR I++ LD + VS Q +LTK DKV+P  L          L  H +  P V   SA TG GMAEL
Sbjct:   48 QIPETTLPEVAFAGRSNVGKSSLVNALVGQRMLARTSNTPGRTQLLNFFDLDS------RLMLTDLPGYGFAKAPKDRVERWTALVQAYLKGRP--PLRRALLLIDARHGIKAVDRGIMTLLDSAAVSYQAVLTKADKVRPGTLASVTAATVSELASHTAAHPEVQVTSAHTGSGMAEL 218

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BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Match: A0A7X4EQK0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7X4EQK0_9PROT)

HSP 1 Score: 153 bits (387), Expect = 6.380e-40
Identity = 83/178 (46.63%), Postives = 110/178 (61.80%), Query Frame = 1

Query:  370 LPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTKTINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERPCNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVLLKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAEL 903
            LP +  PE+AFAGRSN GKS+LI  + G   L RTS  PG T+ +NFF L G      + YLVDLPGYG+AR  ++ VR W A++R YL+ R    LRR  +L+D+R GL  GDR I+  LD + VS QI+LTK DK+  + L   + G  ++   H +C P +   SA  G G+AEL
Sbjct:   41 LPPDALPEIAFAGRSNVGKSSLINALTGRKALARTSNTPGRTQQVNFFDLGG------RLYLVDLPGYGYARASKDKVRRWNALIRDYLRGR--TGLRRVCLLIDTRRGLTPGDREIMELLDAAAVSYQIVLTKSDKLHESELAACLAGTARTAARHPACHPDIAATSAEKGSGIAEL 210

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig6971.14914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KI28_9PHAE	4.170e-83	55.79	EngB-type G domain-containing protein n=2 Tax=Ecto...	[more]
A0A835YYM3_9STRA	2.930e-61	43.46	YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema min...	[more]
A0A061QDS3_9PROT	1.800e-41	45.70	Probable GTP-binding protein EngB n=2 Tax=Alphapro...	[more]
A0A2W4KWF0_9PROT	3.820e-41	44.62	Probable GTP-binding protein EngB n=1 Tax=Proteoba...	[more]
A0A482SLS6_9ARCH	3.850e-41	42.21	Probable GTP-binding protein EngB n=1 Tax=archaeon...	[more]
A0A2E1XCC7_9PROT	7.310e-41	46.63	Probable GTP-binding protein EngB n=1 Tax=Parvular...	[more]
UPI0012E7BCFD	2.360e-40	43.96	ribosome biogenesis GTP-binding protein YihA/YsxC ...	[more]
A0A2U1W0M8_9PROT	2.430e-40	48.60	Probable GTP-binding protein EngB n=1 Tax=Azospiri...	[more]
A0A6C1SS75_9PROT	4.760e-40	45.81	Probable GTP-binding protein EngB n=1 Tax=Rhodospi...	[more]
A0A7X4EQK0_9PROT	6.380e-40	46.63	Probable GTP-binding protein EngB n=1 Tax=Rhodospi...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig6971	contig	H-paniculata_contig6971:2810..7787 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	267.7
Seed ortholog evalue	5.7e-69
Seed eggNOG ortholog	2880.D8LHL3
Hectar predicted targeting category	other localisation
EggNOG free text desc.	GTP binding
EggNOG OGs	COG0218@1,KOG2486@2759
Ec32 ortholog description	YihA2, YihA/EngB-like GTPase
Ec32 ortholog	Ec-26_003560.1
COG Functional cat.	V
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	2
Model size	1550
Cds size	780
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig6971.14914.1	prot_H-paniculata_contig6971.14914.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig6971 6436..7215 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930838.4716868-UTR-H-paniculata_contig6971:2809..2975	1622930838.4716868-UTR-H-paniculata_contig6971:2809..2975	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig6971 2810..2975 +
1691481475.2870343-UTR-H-paniculata_contig6971:2809..2975	1691481475.2870343-UTR-H-paniculata_contig6971:2809..2975	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig6971 2810..2975 +
1622930838.4863422-UTR-H-paniculata_contig6971:6403..6435	1622930838.4863422-UTR-H-paniculata_contig6971:6403..6435	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig6971 6404..6435 +
1691481475.2974682-UTR-H-paniculata_contig6971:6403..6435	1691481475.2974682-UTR-H-paniculata_contig6971:6403..6435	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig6971 6404..6435 +
1622930838.5129313-UTR-H-paniculata_contig6971:7215..7787	1622930838.5129313-UTR-H-paniculata_contig6971:7215..7787	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig6971 7216..7787 +
1691481475.318407-UTR-H-paniculata_contig6971:7215..7787	1691481475.318407-UTR-H-paniculata_contig6971:7215..7787	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig6971 7216..7787 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930838.5000696-CDS-H-paniculata_contig6971:6435..7215	1622930838.5000696-CDS-H-paniculata_contig6971:6435..7215	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig6971 6436..7215 +
1691481475.3080695-CDS-H-paniculata_contig6971:6435..7215	1691481475.3080695-CDS-H-paniculata_contig6971:6435..7215	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig6971 6436..7215 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig6971:2810..7787+
coding sequence from alignment at H-paniculata_contig6971:2810..7787+

protein sequence of mRNA_H-paniculata_contig6971.14914.1

>prot_H-paniculata_contig6971.14914.1 ID=prot_H-paniculata_contig6971.14914.1|Name=mRNA_H-paniculata_contig6971.14914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp
MRAPAVLRSLPVQLAVATKSPWVYTVQGVNPDAILHPPGRLSSLRGEFTS
PESLNFELPRNGRPELAFAGRSNAGKSTLIGKIIGTSKLVRTSKQPGCTK
TINFFALRGDGAGPPQSYLVDLPGYGFAREKREAVREWAAVVRGYLKERP
CNVLRRAFVLVDSRHGLQRGDRHILSTLDESGVSTQIILTKVDKVQPAVL
LKAVEGVCQSLLLHQSCFPVVHCVSARTGLGMAELTNTVWHLCSEPLQKT
RQYPQRQRQ*

mRNA from alignment at H-paniculata_contig6971:2810..7787+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig6971.14914.1 ID=mRNA_H-paniculata_contig6971.14914.1|Name=mRNA_H-paniculata_contig6971.14914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4978bp|location=Sequence derived from alignment at H-paniculata_contig6971:2810..7787+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGCATACAAGGTCAGAGTGATGAGTATGCAGGAGGACATTGATTTTGC
ATTTTATATTTAAGAAATATTGGATTCACATTGTAGAATAGGTTTCTCAC
GTTGTTCTAGCTAATAAAATTGGGTAACAGCGATATGCAAGGAAGTTACC
ATTGGATGCTCTGAAGGTGAGATCTGAGGCAGGGTCACGAGCAGCAGCAC
CATCGGGCCAGGTTTGCGCTAACGACGCATATATATTTACATTTACCATA
AGTTCCCTTAAGAGCAGTTTGAAGAGTACAGTTCCGAGTAATTCCCGCAG
GTGGATATATGTAACGAAAATGGTCTTTCTCACAAGCAAGATCGATGTTA
TGTTGCATGTGCTCGCAGTTGAAGATGTACACACGATTCGTGTTGACTAA
GGGTGGAGCGTTCAAAAAGGGTACCCCAAAACAGAGCTGGTGGACCAAGG
ACAGATTCAGAGGGTCTTGGTCCGCCAACATTGATAATCTCGTGCTAGCG
AACGGCAGGATTGCACGCTGCGTGTATCGTGTAGAAGAAGGTGGGTTGAC
CCGATTTAGAGGCGATTTCGTCTACACCTTCGGACATCAGTGTGACAGAC
AGATTTTAGAGTTCAAAATTCGAAATACCACGAGTAGGGCAGGGCGTAAG
TAGTGAAACTCGCTGAAGCAAGTCGGAAAACCGGACACTAGCAATGTCTT
TTTCCGAAGGACAATTACAACTTAGTTTCGTAGACAATGCAGTGCAGTAC
GCATTATGCTGTATTGCAGGTGGACAGCGGCTATAGCTGTGACTGCTACA
GACATTGATCCTGGATACGCTAACCCGCGGTAGTTCAGTACTTTGGAGGG
AGGCTTGTGTGTAACAACTTACATCGTGGACACAACTTGCAGAATCTTCA
ACTAGCCAGGAAAAAGCATACCCCCTCCACCCTCAAAATTCTGACGCGTT
TATGGTTGTTTTCAAAAATCTACTTGATACTGCAACTTCTAGATTCAACG
TCATTCAGGCATACCGTTCGGACACCCGCAACGTCGGCTTGCATAAAAAA
CAGTAAAAATCGTCGAAAACCTATCTGAAGACGACTTTTTTACTGAATTA
AACAAAGTGTAGCAAACACAGCAAAATTTTCATAACTTTTCAACTTTGAA
ATATGTATTAATCAAAATGTTTACTCCGAAGTTGTGTTTCTCTTTCGAAG
GCTATGTTTGAAATATGTATGTATACTCATCTCAACGTTGTGCTCGTATT
TTGCTGGATCTCAAAATTGAGGAAGACGGGAAATGTTTTATAGTAAAAAG
ACGTCCAGATGCGCTAAAAGTGTTGTAAGCCGATGCCCACTGCTGTACAT
GGTGTTAAAGAATTATTACAGTATGGTAATTATTGTGTTTTGCTTCCCGA
TAGTATGCAGACTCGGACGTGGCTATTGGCAACTATAGGCAATAATCGCA
AACCAGAAATAGATCGTTGAAAACCTGTCTAACAAATGGCATACCAAAAA
GTGCCTTCAGAAGCTCATCAACAGACAACACCGAAGCTACTCTTTTGTTG
GCTGATCCAGCGTAGCGTAATCCAGCGCAATGAATTGCTCACCGACAAGA
ACCTCGTGGGCAAAATGATTATCATGACTAAACATGCCTTCCAGCATCGC
AGACTCGGATATTGAAGAAATATAGATGAAACGGAACTGGCAAACGAGAA
GAGGTAGTATGGCATAGTTTGAACCAAACTGGAGTCCTGTGTTTATTTCT
CCAAAATCCAAAATCGAAACAGTGAAGCTCCAAAGTCCACACCTTATGGA
CCCCACAGAATTGGTTGGCCCCTTACTTGATTCGTCGAGACATCTGTTTA
CGTTAAATCTTTTAAACAAAGTGGATGGCTACAGGTTGGGGCGGGAGGAG
TACATCTGCAAGACAATAAACTTGCACGGCTCAGAGCTGAACCTTAAAGG
TAAAGTGTGCTCACCCCAGACCTTTTTTTTTTATTATTTAGTATCGACCA
GCATCATCGCGTTGTGACACAGTTTATATCATCTGCGTTATTTACCCGCA
GTCAAACTCTAGGAAGCATTACAGACTGCGCAATGGTTTCGCCTCGTGAC
CAGTTTTTATGTACACAATTGTCCACGCTCGAGATATACCGCCGCACTTG
CTCAAGATCTGGGGTGGGAATATAGTGGACCTCAGTAACTACATAAGCAC
AGGGCAATGAAGCACGAATCTCTTAGCGACCCCGAATGGTGGATTGTGAG
CGATTTTGAGCTGTGGCGCGACCCTAAATCTCATATACAGGACCATATCG
CTTTGTCAATTGTGTCAAGGCAACAACCGCTTTCTCGGAGAATGAGGCAG
TGTGGTGAGAGAAGACGGGTTTTTTTTCCAGGCCGGCACACACTTTCCCC
TGGTTCGGTGGCTGAACACTTTTCTTCAAAACCAGCGTTCGCGCTAGTAG
ACGTCTTGCGCGAATTTCCTACAGGGCACCCGTACTTTGCGGGGGCTGCA
GGTAGTGGTAAATATTGATGACAAATCGGTGGAAGCGAGCTTCAAGAAAA
GACCTTCATTAATGACCTACGATTTACGGAAGGTTTCGAGTTGAGACTGC
ACTGGGTACACAAATAAGCAATGGGGAGGACGAGAAGATCATGTGCCCGC
AATGGACAGAAGTCGTGCGGTTCTTTTCGCCGGGTGTGGTACCACTTCAG
GGGGGTTTACGTTGACTTGATGGTCACTGTTGTGTCCACACAGCGCATTC
GGTCAGCAGTCGTCTGGGTAGCTACACTACTGGTATTTCTCTCACCGTAC
GCATGGCTCGGATCTGAGGGGGCTGGTTTTCTTGCATAAATGTGGCCCGG
GAGCCAGGATTGTGCCAGCAAAGATTCGGTGTATTCGCCTTAATCAAGTA
GGCAGGGACTGTCCTTCAGCTTCTCGACAACTGCCATATGCACGTAGTGG
TTATTCTGCGCAACGAGAGAGGCACATGTCATCCTAAATTGCAACCCCTC
CGGGTCGGCTAATGGGGAGTAGCGCCGAAAGGGGTACGGGGGGTTTTGAT
GTCCGATCACCAGCGTGTTTGTCGCTGACAGAACATTTGTGCACTGGTTT
GAGCAGTGGCACAGAGTTGGCACTGATTTTGACAGACTATGGTACAGATA
TTAGTTGTGGCGTACATCACAGACAACATACACAAGCACAGAGCAGCGGC
ATGACTGAACGGGTGATTCCATACTTCTTCGGGCTCATGTAGCCAAATAA
CAGTTCCCCCATACTATGACGAAATTACAATTAGTGCAGCACAGTTGGAC
TTTCGCGCGAAAGCGAAAACAACTCATCATCTATTTTCGTTTGATAGACA
CAGACTGCTGTCGTTGTAGCCTCGGCGGTGTACGTGCTTTATGTGGACAT
GTTGCAGCTGGCAAGAGTGCAGTGCATTCATCAACTCAATGAAACGGTTT
TGACCGGCGTTGGACGGTAACTGGGTTCGTCTCTCGTGCTCCTCCAAACC
CGAAATGCCTTGACCTCCGTGAAGAAATGGTTTGAAAGCCGCGTCGCTCT
CCCGTCTTCCACTGTTTTGTATATCATGTGTTCAATGTGCGCAGATTCTT
GAGCTGCGGCGTGGACCACCGATAAAATGCGTGCGCCCGCCGTTCTGCGC
AGCTTGCCAGTGCAATTGGCGGTTGCTACAAAGTCTCCGTGGGTGTACAC
GGTCCAGGGGGTGAATCCCGACGCCATCCTTCATCCCCCTGGCCGCCTCA
GCTCCTTGCGCGGAGAATTCACATCACCAGAATCGTTAAACTTCGAGCTA
CCCAGGAATGGACGGCCGGAGTTGGCGTTTGCGGGGCGATCGAATGCCGG
GAAATCCACGCTGATTGGAAAGATTATTGGGACATCGAAGCTTGTCAGAA
CCTCAAAACAACCGGGATGCACCAAGACAATCAATTTCTTCGCTTTGCGA
GGCGATGGGGCTGGTCCGCCACAGTCATACCTTGTTGATCTTCCTGGGTA
TGGATTCGCCCGTGAAAAGAGAGAAGCAGTGCGGGAGTGGGCTGCTGTTG
TCAGAGGCTACTTGAAAGAGAGACCCTGCAACGTGTTACGTCGAGCGTTT
GTACTGGTAGACAGTCGACACGGTCTGCAGCGCGGTGATAGGCATATCCT
GTCAACCTTGGACGAATCAGGAGTATCAACCCAAATTATACTGACCAAAG
TTGACAAGGTACAACCTGCGGTGCTCTTGAAGGCAGTCGAGGGCGTGTGT
CAATCTTTGTTGCTACACCAGTCGTGCTTTCCTGTCGTGCACTGCGTAAG
TGCCCGAACGGGATTGGGGATGGCTGAGCTCACCAATACTGTGTGGCATT
TGTGTTCAGAGCCATTGCAAAAAACGCGACAGTATCCTCAACGGCAGAGG
CAATAGAAACGAGCAGTTAACCAGTGTAAGGTTGAACAGCTCACTGAAAT
GGGAAATCAACGTCTCCGTTCTTATTTTATCACACGAACACACGAGGCTT
TTGTAGTGGCTAGGCCCCTTTGCATCTCAACGCTCGTGGTCGCGCTAACA
ACAACGCGCGCTACAGAGAGAGAGAGAGAAAGAAAGAAGGGGCACGCAGT
TGTCTGATTGGTCGGCAATAACTTCTTCTGATGGTTGTGTCCTTTTTCAT
TTTATTGCACAAGATCAGTTGACTCGATTGTACAAGTGGTACTGGGTGAT
TTGACCTGAACGACGAATACATGTTATGCGATTGTCTTCGAGCTGTGTCC
CACTATGGTCTGTAGTACAGTCAAAATGGCGTGGCAATGCAGGTCAGAAC
GACTGACAATCCTACTGTGGCTTCTTAAACAGTGTAGTCGTGCCGTGTGA
CGTGGATAGTCAAAGACTGGTCAATGAGGATGACTCGCCATCCAATGGTA
TGGGACCATGGATAAAAAATACCGCTCTCGGCTTGATCGATTTATTGATT
GTATCTGACCTTCGGGGGGTTCGCTGCC

Coding sequence (CDS) from alignment at H-paniculata_contig6971:2810..7787+

>mRNA_H-paniculata_contig6971.14914.1 ID=mRNA_H-paniculata_contig6971.14914.1|Name=mRNA_H-paniculata_contig6971.14914.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1560bp|location=Sequence derived from alignment at H-paniculata_contig6971:2810..7787+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGTGCGCCCGCCGTTCTGCGCAGCTTGCCAGTGCAATTGGCGGTTGC
TACAAAGTCTCCGTGGGTGTACACGGTCCAGGGGGTGAATCCCGACGCCA
TCCTTCATCCCCCTGGCCGCCTCAGCTCCTTGCGCGGAGAATTCACATCA
CCAGAATCGTTAAACTTCGAGCTACCCAGGAATGGACGGCCGGAGTTGGC
GTTTGCGGGGCGATCGAATGCCGGGAAATCCACGCTGATTGGAAAGATTA
TTGGGACATCGAAGCTTGTCAGAACCTCAAAACAACCGGGATGCACCAAG
ACAATCAATTTCTTCGCTTTGCGAGGCGATGGGGCTGGTCCGCCACAGTC
ATACCTTGTTGATCTTCCTGGGTATGGATTCGCCCGTGAAAAGAGAGAAG
CAGTGCGGGAGTGGGCTGCTGTTGTCAGAGGCTACTTGAAAGAGAGACCC
TGCAACGTGTTACGTCGAGCGTTTGTACTGGTAGACAGTCGACACGGTCT
GCAGCGCGGTGATAGGCATATCCTGTCAACCTTGGACGAATCAGGAGTAT
CAACCCAAATTATACTGACCAAAGTTGACAAGGTACAACCTGCGGTGCTC
TTGAAGGCAGTCGAGGGCGTGTGTCAATCTTTGTTGCTACACCAGTCGTG
CTTTCCTGTCGTGCACTGCGTAAGTGCCCGAACGGGATTGGGGATGGCTG
AGCTCACCAATACTGTGTGGCATTTGTGTTCAGAGCCATTGCAAAAAACG
CGACAGTATCCTCAACGGCAGAGGCAATAGATGCGTGCGCCCGCCGTTCT
GCGCAGCTTGCCAGTGCAATTGGCGGTTGCTACAAAGTCTCCGTGGGTGT
ACACGGTCCAGGGGGTGAATCCCGACGCCATCCTTCATCCCCCTGGCCGC
CTCAGCTCCTTGCGCGGAGAATTCACATCACCAGAATCGTTAAACTTCGA
GCTACCCAGGAATGGACGGCCGGAGTTGGCGTTTGCGGGGCGATCGAATG
CCGGGAAATCCACGCTGATTGGAAAGATTATTGGGACATCGAAGCTTGTC
AGAACCTCAAAACAACCGGGATGCACCAAGACAATCAATTTCTTCGCTTT
GCGAGGCGATGGGGCTGGTCCGCCACAGTCATACCTTGTTGATCTTCCTG
GGTATGGATTCGCCCGTGAAAAGAGAGAAGCAGTGCGGGAGTGGGCTGCT
GTTGTCAGAGGCTACTTGAAAGAGAGACCCTGCAACGTGTTACGTCGAGC
GTTTGTACTGGTAGACAGTCGACACGGTCTGCAGCGCGGTGATAGGCATA
TCCTGTCAACCTTGGACGAATCAGGAGTATCAACCCAAATTATACTGACC
AAAGTTGACAAGGTACAACCTGCGGTGCTCTTGAAGGCAGTCGAGGGCGT
GTGTCAATCTTTGTTGCTACACCAGTCGTGCTTTCCTGTCGTGCACTGCG
TAAGTGCCCGAACGGGATTGGGGATGGCTGAGCTCACCAATACTGTGTGG
CATTTGTGTTCAGAGCCATTGCAAAAAACGCGACAGTATCCTCAACGGCA
GAGGCAATAG