mRNA_H-paniculata_contig6971.14913.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6971.14913.1
Unique NamemRNA_H-paniculata_contig6971.14913.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Match: A0A6H5JA44_9PHAE (SAC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA44_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 2.190e-98
Identity = 159/198 (80.30%), Postives = 176/198 (88.89%), Query Frame = 1 
Query:    4 VGAIGGNLIYGIGSTQMFPIKPADATSAALSSSTGHSSDSNAFVNTLAKVNRRLNPTPRYLTTRGLITEARYLGLFQLIDLSKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWVMPIVHGAFLQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQV 597
            VGAIGGNL+Y I +T+MF IKPAD  S ALSS+  H +DSNAFV+TLAKVNRRL+PT R         EA+YLGLFQ IDL+KDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWV+PIVHGA+LQRKC+L GR+LN+T+IARRSRHFAGTRYLKRGVSD+G VANDVEVEQ+
Sbjct:  123 VGAIGGNLVYAIKATEMFAIKPADTASGALSSTAAHGNDSNAFVSTLAKVNRRLHPTQRETA------EAKYLGLFQFIDLTKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWVIPIVHGAYLQRKCDLSGRMLNITVIARRSRHFAGTRYLKRGVSDTGKVANDVEVEQI 314
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BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Match: A0A835YSI4_9STRA (SacI homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI4_9STRA)

HSP 1 Score: 250 bits (639), Expect = 3.030e-73
Identity = 132/182 (72.53%), Postives = 146/182 (80.22%), Query Frame = 1 
Query:   67 PADATSAALSSSTG-HSSDSNAFVN----TLAKVNRRLNPTPRYLTTRGLITEARYLGLFQLIDLSKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWVMPIVHGAFLQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQV 597
            P DATS+ ++   G  S DS A V      L  VNRRLNPTP        + EARYL LFQ IDL+KDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNF+ TRELE+  GHLNSSFWV P+VHGAFLQR+C+L GR+L +T++ARRSRHFAGTRYLKRGVSD GAVANDVEVEQV
Sbjct:  286 PEDATSSGVACQGGVFSMDSAAGVTGETRPLRHVNRRLNPTP------SEVAEARYLSLFQFIDLTKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFYLTRELESLTGHLNSSFWVQPVVHGAFLQRRCSLFGRVLTLTVMARRSRHFAGTRYLKRGVSDCGAVANDVEVEQV 461
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BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Match: A0A7S2RBY7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBY7_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.330e-63
Identity = 109/149 (73.15%), Postives = 124/149 (83.22%), Query Frame = 1 
Query:  151 VNRRLNPTPRYLTTRGLITEARYLGLFQLIDLSKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWVMPIVHGAFLQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQV 597
            VNRRLNPT +       I E RYLGLFQ IDLSKDFF+SYTYDLT SLQHNMTAATSKTFP PP KDMYAWN + TRE E+ +G L++SFWV+P++HGAFLQ+KC L GR L++ LIARRSRHFAGTRYLKRGVSD G VANDVE+EQ+
Sbjct:    1 VNRRLNPTQQE------IAEQRYLGLFQFIDLSKDFFFSYTYDLTQSLQHNMTAATSKTFPLPPCKDMYAWNCNLTREFESCIGQLSASFWVLPVIHGAFLQKKCTLFGRNLHLMLIARRSRHFAGTRYLKRGVSDQGKVANDVELEQI 143
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BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Match: A0A448ZH39_9STRA (SAC domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZH39_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.450e-58
Identity = 117/205 (57.07%), Postives = 143/205 (69.76%), Query Frame = 1 
Query:    1 QVGAIGGNLIYGIGSTQMFPIKPADATSAALSSSTG------HSSDSNAFVNTLAKVNRRLNPTPRYLTTRGLITEARYLGLFQLIDLSKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWVMPIVHGAFLQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQV 597
            +VG+IGGN IY I ST+ FPIKPA++    ++  TG      H+  S+  +N     NR        LT R  I E RY GL+Q++DL+K+FF+SYTYDLT SLQ N+ + TSK FPPPPFKDM+AWN+  TRELE     L+S  W MPI+HGAF+QRK N  GR LNV L+ARRSRHFAGTRYLKRGVS+ G VANDVE EQ+
Sbjct:  232 KVGSIGGNGIYTIKSTETFPIKPAES----VNGGTGNGDIDIHADPSSVLLNMW---NRGKRSVGLGLTNRE-IAELRYQGLYQVVDLTKNFFFSYTYDLTRSLQENVLSNTSKPFPPPPFKDMFAWNYFLTRELEECTDSLSSFHWQMPIIHGAFVQRKLNDYGRSLNVILLARRSRHFAGTRYLKRGVSEQGKVANDVEHEQI 428
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BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Match: A0A1Z5J8N5_FISSO (SAC domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8N5_FISSO)

HSP 1 Score: 195 bits (495), Expect = 6.670e-54
Identity = 108/201 (53.73%), Postives = 136/201 (67.66%), Query Frame = 1 
Query:    1 QVGAIGGNLIYGIGSTQMFPIKPADATSAALSSSTGHSSDSNAFVNT--LAKVNRRLNPTPRYLTTRGLITEARYLGLFQLIDLSKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWVMPIVHGAFLQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQV 597
            +VG+IGGN IY I +T+  P+KPA+        S  H  D NA  ++  L+  NR        LT R  I E RY GL+Q++D SK FF+SYTYDLT SLQ N    T+K  PPPP K+M+ WNF  TRE EA +  + S +WV P++HGAF+QR+ N  GRIL++TL+ARRSRHFAGTRYLKRGVS+ G VANDVE EQ+
Sbjct:  196 KVGSIGGNNIYTIKNTETIPLKPAEK-------SAFHREDDNADPSSVLLSMWNRGKRSVGLGLTNRE-IAELRYQGLYQVMDFSKHFFFSYTYDLTRSLQENFLLTTTKPLPPPPSKEMFMWNFFLTREFEACLDVMTSFYWVNPMIHGAFVQRRVNDYGRILDITLLARRSRHFAGTRYLKRGVSEHGKVANDVEHEQI 388
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BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Match: K0RDM7_THAOC (SAC domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RDM7_THAOC)

HSP 1 Score: 189 bits (479), Expect = 1.880e-52
Identity = 114/218 (52.29%), Postives = 137/218 (62.84%), Query Frame = 1 
Query:    1 QVGAIGGNLIYGIGSTQMFPIKPADATSAALSSSTGHSS-----DSNAFVNTLAKVNRRLNPTPRYLTTRGLITEARYLGLFQLIDLSKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELE-AQVGHL-------------NSSFWVMPIVHGAFLQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQV 597
            +VG+IGGN IY I ST+ FP+KPA+  S       GH       D    +  L+  NR        L+ R  I E RY GL+Q++DL+K+FF+SYTYDLT SLQ N  A TS+  PP P+KDMYAWN   TRELE    GH              N+  WV+P+VHGAF+QRK +  GR LN+ L+ARRSRHFAGTRYLKRGVSD G VANDVE EQV
Sbjct:   67 KVGSIGGNSIYTIKSTETFPLKPAERDS-------GHDGXXXXXDPGGVL--LSMWNRGKRSVGLGLSNRE-IAELRYQGLYQVVDLAKNFFFSYTYDLTRSLQENFLAMTSRPVPPAPYKDMYAWNHFLTRELEECGSGHTAHPSSGGGPATPGNAYHWVLPVVHGAFIQRKLHDYGRSLNLVLLARRSRHFAGTRYLKRGVSDRGKVANDVEHEQV 274
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BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Match: B8CEM3_THAPS (Phosphatidylinositol phosphatase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEM3_THAPS)

HSP 1 Score: 184 bits (467), Expect = 1.670e-51
Identity = 92/145 (63.45%), Postives = 107/145 (73.79%), Query Frame = 1 
Query:  163 LNPTPRYLTTRGLITEARYLGLFQLIDLSKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWVMPIVHGAFLQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQV 597
            L P  R   T   I E RY GL+Q++DL+K+FF+SYTYDLT SLQ N  A TS+ FPP  FKDMYAWNF  TRELE     + S  WV+P+VHGAF+QRK +  GR LN+ L+ARRSRHFAGTRYLKRGVSD G VANDVE EQ+
Sbjct:  141 LKPAERLGLTNREIAELRYQGLYQVVDLTKNFFFSYTYDLTRSLQENFLAMTSQPFPPAKFKDMYAWNFFLTRELEECTNSMTSFNWVLPVVHGAFIQRKLHDYGRSLNLMLLARRSRHFAGTRYLKRGVSDRGKVANDVEHEQI 285
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BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Match: A0A7S1ZJ82_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZJ82_9STRA)

HSP 1 Score: 173 bits (438), Expect = 9.900e-51
Identity = 83/120 (69.17%), Postives = 95/120 (79.17%), Query Frame = 1 
Query:  238 IDLSKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWVMPIVHGAFLQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQV 597
            +DL+KDFF+SYTYD+T SLQ N    T++ FPPPPFKDMYAWNF  TRELE     L S  WV+PI+HGAF+Q K N  GR LN+TL+ARRSRHFAGTRYLKRGVSD G VANDVE EQ+
Sbjct:    1 VDLTKDFFFSYTYDMTRSLQENFLFCTAQPFPPPPFKDMYAWNFFLTRELEECTSSLTSFHWVLPIIHGAFIQCKLNDYGRSLNLTLLARRSRHFAGTRYLKRGVSDRGKVANDVEHEQI 120
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BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Match: F0Y2V1_AURAN (SAC domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2V1_AURAN)

HSP 1 Score: 181 bits (459), Expect = 2.970e-50
Identity = 101/205 (49.27%), Postives = 123/205 (60.00%), Query Frame = 1 
Query:    1 QVGAIGGNLIYGIGSTQMFPIKPADATSAALSSSTGHSSDSNAFVNTLAKVNRRLNPTPRYLTTRGLITEARYLGLFQLIDLSKDFFYSYTYDLTNSLQHNMTAATSKTFPPP------PFKDMYAWNFHQTRELEAQVGHLNSSFWVMPIVHGAFLQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQV 597
            +VG IGGN +YGI +T+M  IKP  A S                                    + LI   RY+GLFQ IDL+KDFF+SYTYDLT +LQHNMT+A              P K MYAWN H TREL   +   +++ W + + HGAF+QRKC L GR++NVTL+ARRSRHFAGTRYLKRGVSD G VANDVE+EQ+
Sbjct:  115 KVGQIGGNAVYGIKATEMIAIKPESARSG----------------------------------DQSLIKSLRYVGLFQFIDLTKDFFFSYTYDLTRTLQHNMTSALPAAGAGEGGPRNAPRKAMYAWNDHLTRELGDALDARSAARWTLALTHGAFVQRKCTLFGRVVNVTLVARRSRHFAGTRYLKRGVSDGGKVANDVELEQI 285
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BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Match: A0A1E7FKZ4_9STRA (Syja_N-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKZ4_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.590e-50
Identity = 88/138 (63.77%), Postives = 108/138 (78.26%), Query Frame = 1 
Query:  184 LTTRGLITEARYLGLFQLIDLSKDFFYSYTYDLTNSLQHNMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWVMPIVHGAFLQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQV 597
            LT R  I E RY GL+Q++DL+K+FF+SYTYDLT SLQ N  + TS+ FPPPPFKDM+AWN+  TRELE     L+S  W +P++HGAF+Q+K N  GR LNV L+ARRSRHFAGTRYLKRGV++ G VANDVE EQ+
Sbjct:  169 LTNRE-IAELRYQGLYQVVDLTKNFFFSYTYDLTRSLQENFLSNTSQPFPPPPFKDMFAWNYFLTRELEECTNSLSSYHWQLPVIHGAFVQKKLNDYGRSLNVILLARRSRHFAGTRYLKRGVNEQGKVANDVEHEQI 305
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6971.14913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA44_9PHAE2.190e-9880.30SAC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YSI4_9STRA3.030e-7372.53SacI homology domain-containing protein n=1 Tax=Tr... [more]
A0A7S2RBY7_9STRA2.330e-6373.15Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A448ZH39_9STRA2.450e-5857.07SAC domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
A0A1Z5J8N5_FISSO6.670e-5453.73SAC domain-containing protein n=2 Tax=Fistulifera ... [more]
K0RDM7_THAOC1.880e-5252.29SAC domain-containing protein (Fragment) n=1 Tax=T... [more]
B8CEM3_THAPS1.670e-5163.45Phosphatidylinositol phosphatase (Fragment) n=1 Ta... [more]
A0A7S1ZJ82_9STRA9.900e-5169.17Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
F0Y2V1_AURAN2.970e-5049.27SAC domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A1E7FKZ4_9STRA3.590e-5063.77Syja_N-domain-containing protein (Fragment) n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6971contigH-paniculata_contig6971:201..1842 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score322.0
Seed ortholog evalue2e-85
Seed eggNOG ortholog2880.D8LRT7
Preferred nameFIG4
KEGG rclassRC00078
KEGG koko:K20279
KEGG ReactionR04404,R09827
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0003824,GO:0004438,GO:0004672,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005811,GO:0005886,GO:0005911,GO:0005942,GO:0006464,GO:0006468,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007033,GO:0007272,GO:0007275,GO:0007399,GO:0007610,GO:0007626,GO:0008150,GO:0008152,GO:0008366,GO:0008610,GO:0008654,GO:0009058,GO:0009506,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009987,GO:0010008,GO:0010720,GO:0010927,GO:0010941,GO:0010975,GO:0010976,GO:0012505,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0019637,GO:0019898,GO:0022008,GO:0022607,GO:0023052,GO:0030054,GO:0030154,GO:0030182,GO:0030258,GO:0031090,GO:0031344,GO:0031346,GO:0031347,GO:0031348,GO:0031410,GO:0031641,GO:0031642,GO:0031644,GO:0031645,GO:0031901,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032288,GO:0032501,GO:0032502,GO:0032989,GO:0032991,GO:0033612,GO:0034399,GO:0034593,GO:0034595,GO:0034596,GO:0035032,GO:0036092,GO:0036211,GO:0042552,GO:0042578,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043473,GO:0043812,GO:0043813,GO:0044057,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046474,GO:0046486,GO:0046488,GO:0046839,GO:0046856,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048646,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051241,GO:0051704,GO:0051707,GO:0051960,GO:0051961,GO:0051962,GO:0052744,GO:0052866,GO:0055044,GO:0060284,GO:0060548,GO:0061695,GO:0065007,GO:0070013,GO:0070772,GO:0071704,GO:0071840,GO:0071944,GO:0080134,GO:0090407,GO:0097708,GO:0098542,GO:0098588,GO:0098791,GO:0098796,GO:0098805,GO:0098852,GO:0106018,GO:0120035,GO:0140096,GO:1901564,GO:1901576,GO:1902494,GO:1990234,GO:2000026
EggNOG free text desc.phosphatidylinositol-4-phosphate phosphatase activity
EggNOG OGsCOG5329@1,KOG1888@2759
EC3.1.3.36
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Exons4
Model size624
Cds size624
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6971.14913.1prot_H-paniculata_contig6971.14913.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6971 201..1842 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930838.37738-CDS-H-paniculata_contig6971:200..2911622930838.37738-CDS-H-paniculata_contig6971:200..291Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6971 201..291 -
1691481475.2331529-CDS-H-paniculata_contig6971:200..2911691481475.2331529-CDS-H-paniculata_contig6971:200..291Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6971 201..291 -
1622930838.398431-CDS-H-paniculata_contig6971:778..9631622930838.398431-CDS-H-paniculata_contig6971:778..963Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6971 779..963 -
1691481475.2511117-CDS-H-paniculata_contig6971:778..9631691481475.2511117-CDS-H-paniculata_contig6971:778..963Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6971 779..963 -
1622930838.4146578-CDS-H-paniculata_contig6971:1087..12341622930838.4146578-CDS-H-paniculata_contig6971:1087..1234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6971 1088..1234 -
1691481475.2680666-CDS-H-paniculata_contig6971:1087..12341691481475.2680666-CDS-H-paniculata_contig6971:1087..1234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6971 1088..1234 -
1622930838.4309213-CDS-H-paniculata_contig6971:1641..18421622930838.4309213-CDS-H-paniculata_contig6971:1641..1842Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6971 1642..1842 -
1691481475.2774482-CDS-H-paniculata_contig6971:1641..18421691481475.2774482-CDS-H-paniculata_contig6971:1641..1842Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6971 1642..1842 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6971.14913.1

>prot_H-paniculata_contig6971.14913.1 ID=prot_H-paniculata_contig6971.14913.1|Name=mRNA_H-paniculata_contig6971.14913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp
QVGAIGGNLIYGIGSTQMFPIKPADATSAALSSSTGHSSDSNAFVNTLAK
VNRRLNPTPRYLTTRGLITEARYLGLFQLIDLSKDFFYSYTYDLTNSLQH
NMTAATSKTFPPPPFKDMYAWNFHQTRELEAQVGHLNSSFWVMPIVHGAF
LQRKCNLLGRILNVTLIARRSRHFAGTRYLKRGVSDSGAVANDVEVEQVR
ASKLKQH*
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mRNA from alignment at H-paniculata_contig6971:201..1842-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6971.14913.1 ID=mRNA_H-paniculata_contig6971.14913.1|Name=mRNA_H-paniculata_contig6971.14913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1642bp|location=Sequence derived from alignment at H-paniculata_contig6971:201..1842- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTTGGGGCAATCGGAGGCAACCTTATCTACGGGATCGGTTCTACGCA
AATGTTTCCCATAAAACCTGCGGACGCCACGTCTGCGGCGCTCAGCTCTT
CAACAGGACATAGCAGTGACTCCAACGCATTCGTTAACACTTTGGCCAAG
GTCAACCGCCGTCTTAACCCGACACCAAGGTATCTTACGACACGAGGTCT
GGTGATACCTTGATTGTACAGGAGTGTACAGTAAAAAAAATCTAGCGCTC
ATATGTTGGTGTCGAATGGCTGCCACCGGCAGCTGTTCGATATAGATATC
GGGCATGAGGTCAGAACTAACGTACACTGGATCATCGTACATACGCAATG
GTTCCTTTTTCCAGCAGATATGCCCTCTTCGTTGTGCCTTGTGCCCATTC
CTACAGTGCGACTATGTTTTTCATTTGCTATCGGGGCACCCGGGGTGGCG
ATTCATGGCTTCATATTTTCTCGATTCGTACGGTTACATTTCACAATTGC
ATGTTTATCGCTCTCCCATGGTTCAAAGGAAGGTTCGAACGACGTGATGT
CTTTCTATACGTTTTGCGCACTCGCTGACGACGATTATCTCGCCATCGCG
ACAGGGAGATCACTGAGGCGCGCTATCTGGGTCTGTTTCAGTTGATTGAC
CTCTCCAAGGACTTCTTCTACTCGTACACATACGACCTCACAAACTCCTT
GCAGCACAACATGACGGCCGCGACCAGCAAGACTTTCCCCCCCCCACCGT
TTAAGGTGCGGATATACCCTCGCTCACATTTTGCCTTTGCCTACAGCGGG
AGTGTTGTGCGATTACCTGCGTAATTTGAGAGCGTTTCCGTACGTGGTCA
TGAATCTTCGTGCCTGCTGGTCCTCGCAGGATATGTACGCGTGGAATTTT
CACCAGACACGTGAGCTCGAGGCCCAGGTGGGACACCTGAATTCTTCGTT
CTGGGTGATGCCTATCGTTCACGGAGCCTTCCTGCAACGAAAGTGTAATC
TACTAGGGCGAATTCTCAACGTCACGCTCATCGCGCGCCGTTCCAGGCAC
TTCGCAGGCACTCGGTAAGTGCAATGCCCCCGAAGGTAAACGTTTGTATA
TGCCCAGATTGAGAATCACGGGTGTTATCATTTTGGCCTACCATGTGGAG
AGGGGATAATGGCTGCAGGCTGGTCCTTGGCTGGCGTTCCGCGTGAGTCA
CAACAGATCAAATTGACTCAATGTAAATGACCAGTATGTTTTTTATCTAG
AATCGCAAATCTATTTAAGAGCGTGCGGTATCAAGTTTTGCGACACAAAA
GAATGGTACAGCCCAAACCACCCAGATGACACATGAACAGAAATGACACA
GAAAATGTCAACTCTGTGATTTATGAAGTTGTGTCGCTGCAGTAAGCTAG
CTTGAAACTTCGGATAAAAGCATCATCCCAATCTCTCATCCACAATCACG
TGTCTTGCGTGTTCAGGAGCCCCAAGAACGCCTGGGGGCGAGGAAATGAG
CTGAACAGTAGCGTTTTTCCAACCACTTCTGCAAATGTTTCTTAACCCCA
GGTACTTGAAGCGTGGCGTCAGTGACTCGGGTGCCGTAGCAAACGATGTG
GAGGTTGAGCAGGTGAGGGCATCGAAGTTAAAGCAGCACTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig6971:201..1842-

>mRNA_H-paniculata_contig6971.14913.1 ID=mRNA_H-paniculata_contig6971.14913.1|Name=mRNA_H-paniculata_contig6971.14913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at H-paniculata_contig6971:201..1842- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTTGGGGCAATCGGAGGCAACCTTATCTACGGGATCGGTTCTACGCA
AATGTTTCCCATAAAACCTGCGGACGCCACGTCTGCGGCGCTCAGCTCTT
CAACAGGACATAGCAGTGACTCCAACGCATTCGTTAACACTTTGGCCAAG
GTCAACCGCCGTCTTAACCCGACACCAAGGTATCTTACGACACGAGGTCT
GCAGGTTGGGGCAATCGGAGGCAACCTTATCTACGGGATCGGTTCTACGC
AAATGTTTCCCATAAAACCTGCGGACGCCACGTCTGCGGCGCTCAGCTCT
TCAACAGGACATAGCAGTGACTCCAACGCATTCGTTAACACTTTGGCCAA
GGTCAACCGCCGTCTTAACCCGACACCAAGGTATCTTACGACACGAGGTC
TGATCACTGAGGCGCGCTATCTGGGTCTGTTTCAGTTGATTGACCTCTCC
AAGGACTTCTTCTACTCGTACACATACGACCTCACAAACTCCTTGCAGCA
CAACATGACGGCCGCGACCAGCAAGACTTTCCCCCCCCCACCGTTTAAGA
TCACTGAGGCGCGCTATCTGGGTCTGTTTCAGTTGATTGACCTCTCCAAG
GACTTCTTCTACTCGTACACATACGACCTCACAAACTCCTTGCAGCACAA
CATGACGGCCGCGACCAGCAAGACTTTCCCCCCCCCACCGTTTAAGGATA
TGTACGCGTGGAATTTTCACCAGACACGTGAGCTCGAGGCCCAGGTGGGA
CACCTGAATTCTTCGTTCTGGGTGATGCCTATCGTTCACGGAGCCTTCCT
GCAACGAAAGTGTAATCTACTAGGGCGAATTCTCAACGTCACGCTCATCG
CGCGCCGTTCCAGGCACTTCGCAGGCACTCGGATATGTACGCGTGGAATT
TTCACCAGACACGTGAGCTCGAGGCCCAGGTGGGACACCTGAATTCTTCG
TTCTGGGTGATGCCTATCGTTCACGGAGCCTTCCTGCAACGAAAGTGTAA
TCTACTAGGGCGAATTCTCAACGTCACGCTCATCGCGCGCCGTTCCAGGC
ACTTCGCAGGCACTCGGTACTTGAAGCGTGGCGTCAGTGACTCGGGTGCC
GTAGCAAACGATGTGGAGGTTGAGCAGGTGAGGGCATCGAAGTTAAAGCA
GCACTGAGTACTTGAAGCGTGGCGTCAGTGACTCGGGTGCCGTAGCAAAC
GATGTGGAGGTTGAGCAGGTGAGGGCATCGAAGTTAAAGCAGCACTGA
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