mRNA_H-paniculata_contig6968.14907.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6968.14907.1
Unique NamemRNA_H-paniculata_contig6968.14907.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 9.570e-93
Identity = 161/224 (71.88%), Postives = 178/224 (79.46%), Query Frame = 1 
Query:    1 LIVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADGARGGVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEACAGVGEDESKHELTASVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRAFFYWRLRRRLAEFDLRRKVKTTGRGGGGRGRPLADPSVDALGASALLGEWFSEENEGNNGD--WDADKAVLRWM 666
            LIVDALV YKQPVFVYIPPHAELRGGAWVVVDSTVNA+VMEMYAA+GARGGVLE NGAASIKFR++DLLKTAHRLDPVL ELD+KL AC   G+   +  + A+V  RET VIGVYRQVAVQFADLHDTPGRMEARGAVRKVVP+ ESR+FF+WRLRRRLAEFDLRR+V              ADPSVD L AS LL +W+  + E N     W+ DKAVL WM
Sbjct: 2011 LIVDALVEYKQPVFVYIPPHAELRGGAWVVVDSTVNANVMEMYAANGARGGVLEANGAASIKFRNKDLLKTAHRLDPVLMELDAKLSACTEEGD---RRNIAAAVAERETRVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPWTESRSFFFWRLRRRLAEFDLRRQVSR------------ADPSVDPLAASGLLKDWYLSDAEVNGARPCWEEDKAVLAWM 2219
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BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Match: D7G0I9_ECTSI (Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I9_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 5.450e-90
Identity = 138/169 (81.66%), Postives = 152/169 (89.94%), Query Frame = 1 
Query:    1 LIVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADGARGGVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEACAGVGEDESKHELTASVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRAFFYWRLRRRLAEFDLRRKV 507
            LIVDALV YKQPVFVYIPPHAELRGGAWVVVDSTVNA+VMEMYAA+GARGGVLE NGAASIKFR++DLLKTAHRLDPVL ELD+KL AC   G D  +  ++A++  RET VIGVYRQVAVQFADLHDTPGRMEARGAVRKVVP+ ESR+FF+WRLRRRLAEFDLRR+ 
Sbjct:    8 LIVDALVEYKQPVFVYIPPHAELRGGAWVVVDSTVNANVMEMYAANGARGGVLEANGAASIKFRNKDLLKTAHRLDPVLMELDAKLSACTEEGGD--RRNISAALAERETRVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPWTESRSFFFWRLRRRLAEFDLRRQA 174
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BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Match: W7T6R6_9STRA (Acetyl-carboxylase alpha n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6R6_9STRA)

HSP 1 Score: 250 bits (639), Expect = 2.310e-80
Identity = 131/226 (57.96%), Postives = 160/226 (70.80%), Query Frame = 1 
Query:    1 LIVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADGARGGVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEACAGVGEDESKH--ELTASVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRAFFYWRLRRRLAEFDLRRKV--KTTGRGGGGRGRPLADPSVDALGASALLGEWFSEENEGNNGDWDADKAVLRWM 666
            +IVDALVA+ QP+FVYIPP AELRGGAWVVVD T++A+ MEMYAA  +RGGVLEPNGAA IKFR++D +  AHRLDPVLR +D+K+E     GE E +   +L    K RE  + G+Y QVAVQFADLHDTPGRMEA G +RKVVP+ ++R+FFYWRLRRRLAEF LR++V     G+ GG  G       +  L ASALL  WF      +   W+ D+ VL WM
Sbjct:    1 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAEAMEMYAATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEVEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKVVPWGQARSFFYWRLRRRLAEFHLRKEVLKAVDGKEGGKEG------GMTLLQASALLKSWFVATPGKSTEGWEEDREVLGWM 220
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BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Match: A0A4D9CUA8_9STRA (CoA carboxyltransferase C-terminal domain-containing protein (Fragment) n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUA8_9STRA)

HSP 1 Score: 252 bits (643), Expect = 9.510e-79
Identity = 133/226 (58.85%), Postives = 160/226 (70.80%), Query Frame = 1 
Query:    1 LIVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADGARGGVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEA--CAGVGEDESKHELTASVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRAFFYWRLRRRLAEFDLRRKVKTTGRG--GGGRGRPLADPSVDALGASALLGEWFSEENEGNNGDWDADKAVLRWM 666
            +IVDALVA+ QP+FVYIPP AELRGGAWVVVD T++A+ MEMYAA  +RGGVLEPNGAA IKFR++D +  AHRLDPVLR +D+K+E    AG GE E   +L    K RE  + G+Y QVAVQFADLHDTPGRMEA G +RK VP+ ++R+FFYWRLRRRLAEF LR++V   G G  GG  G       +  L ASALL  WF      +   W+ D+ VL WM
Sbjct:  173 MIVDALVAFAQPIFVYIPPQAELRGGAWVVVDPTIHAETMEMYAATASRGGVLEPNGAAEIKFREKDYVAAAHRLDPVLRAMDAKMELLEAAGEGEGEEGKQLRRERKDREDALKGIYAQVAVQFADLHDTPGRMEAVGVIRKAVPWGQARSFFYWRLRRRLAEFHLRKEVLKAGDGKEGGKEG------GMTLLQASALLKSWFVATPGKSIEGWEEDREVLGWM 392
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BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Match: A0A835YMY6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY6_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.750e-76
Identity = 136/222 (61.26%), Postives = 164/222 (73.87%), Query Frame = 1 
Query:    4 IVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADGARGGVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEACAGVGEDESKHELTASVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRAFFYWRLRRRLAEFDLRRKVKTTGRGGGGRGRPLADPSVDALGASALLGEWF-SEENEGNNGDWDADKAVLRWM 666
            IVD LVAYKQPVFVYIPP AELRGGAWVVVDST+N DVMEMYAAD +RGGVLE NGAASIKFR +D++  AHRLDP L+++D +L++ A +   E++  LTA  + RE  ++GVY+Q+AVQFADLHDTPGRM A GAVRKVVP+AE+R+FFYWRLRRRLAEFDL R+++   +G          P+     A ALL  WF S  N      W+ DK VL WM
Sbjct: 2012 IVDGLVAYKQPVFVYIPPFAELRGGAWVVVDSTINPDVMEMYAADDSRGGVLEANGAASIKFRQKDIIAAAHRLDPALQQIDHQLQSDASLS-TEARAALTADARTREQRLMGVYQQLAVQFADLHDTPGRMAATGAVRKVVPWAEARSFFYWRLRRRLAEFDLCRQLQQASKG--------KSPAEGIDQARALLKGWFASMVNSTGQQQWEDDKTVLAWM 2224
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BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Match: A0A7S2I8N6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I8N6_9STRA)

HSP 1 Score: 239 bits (611), Expect = 3.350e-75
Identity = 125/226 (55.31%), Postives = 160/226 (70.80%), Query Frame = 1 
Query:    1 LIVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADG-ARGGVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEACAGVGEDESKHELTASVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRAFFYWRLRRRLAEFDLRRKVK---TTGRGGGGRGRPLADPSVDALGASALLGEWFSEENEGNNGDWDADKAVLRWM 666
            LIVDA VAY+QPVFV+IPP AE+RGGAWVV+D+++NA VMEMYA+ G ARGGVLE NGAAS+K+R +DLL T HRLD  LR LD+KL   A    D+ K  +  S+K RE +++ VY Q+AVQF +LHDTPGRM+A G + K V +  +R FF+WRLRR+LAEFD R+K++   T GRG           ++ A+GASA++ EWF      +   WD DKAVL WM
Sbjct:   64 LIVDAFVAYEQPVFVFIPPFAEIRGGAWVVLDASINASVMEMYASSGSARGGVLEANGAASVKYRSKDLLSTMHRLDGTLRSLDAKLSESAS---DDEKVAIKQSIKEREQSLLPVYEQIAVQFCELHDTPGRMKAVGVIEKSVEWKNARTFFFWRLRRKLAEFDFRKKIQEASTIGRG---------IQTLTAIGASAMMKEWFIGTPGMSESMWDDDKAVLSWM 277
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BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Match: A0A7S2A5F5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A5F5_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.920e-70
Identity = 121/223 (54.26%), Postives = 154/223 (69.06%), Query Frame = 1 
Query:    1 LIVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADG-ARGGVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEACAGVGEDESKHELTASVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRAFFYWRLRRRLAEFDLRRKVKTTGRGGGGRGRPLADPSVDALGASALLGEWFSEENEGNNGDWDADKAVLRWM 666
            LIVDA VAY+QP+FV+IPP AE+RGGAWVV+D+++NA VMEMYA  G ARGGVLE NGAAS+K+R +DLL T HRLD  L+ LD KL        D+ K  +  S+  RE ++I VY Q+AVQF +LHDTPGRMEA G + K + + E+R+FF+WRLRR+LAEFD R+K++     G G         + A+GASAL+  WF          W+ADKAVL WM
Sbjct:  408 LIVDAFVAYEQPIFVFIPPFAEIRGGAWVVLDASINASVMEMYATSGSARGGVLEANGAASVKYRTKDLLSTMHRLDDTLKSLDKKLSESTS---DDEKKTIKQSINEREQSLIPVYEQIAVQFCELHDTPGRMEAVGVIEKSIEWKEARSFFFWRLRRKLAEFDFRKKIQEASSVGSGF------EGMTAIGASALMKTWFIGTPGMTEDMWNADKAVLSWM 621
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BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Match: A0A812R0U4_SYMMI (AccA protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R0U4_SYMMI)

HSP 1 Score: 224 bits (571), Expect = 4.720e-70
Identity = 119/222 (53.60%), Postives = 148/222 (66.67%), Query Frame = 1 
Query:    1 LIVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADGARGGVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEACAGVGEDESKHELTASVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRAFFYWRLRRRLAEFDLRRKVKTTGRGGGGRGRPLADPSVDALGASALLGEWFSEENEGNNGDWDADKAVLRWM 666
            +IVDA VAY QP+FVYIPPHAELRGGAWVVVD T+N DVME YAA+ ARGGVLE  GAASIKFRD ++LKTA+RLDP+L  L  +L   A  G D    E+   +  R+  V+GV+RQ+AV FADLHDTPGRM+A+G +R+ V +A+SR FFYWRLRRRLAEFD+   +           R L         A  +L EW      G++  W+ DK  + W+
Sbjct:    1 MIVDAFVAYSQPLFVYIPPHAELRGGAWVVVDHTINKDVMEFYAAEDARGGVLEAAGAASIKFRDNEILKTANRLDPILIGLQREL--AAAKGNDGQCKEIKIRMTVRQKLVLGVFRQIAVHFADLHDTPGRMQAKGVIRQQVTWAQSRHFFYWRLRRRLAEFDVANSM-----------RELDKSIKTRQDAIDVLKEWCFSAG-GSDVTWNDDKKAMLWL 208
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BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Match: A0A0B4L7U5_9STRA (Acetyl-CoA carboxylase (Fragment) n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7U5_9STRA)

HSP 1 Score: 242 bits (617), Expect = 4.920e-70
Identity = 128/226 (56.64%), Postives = 159/226 (70.35%), Query Frame = 1 
Query:    1 LIVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADGARGGVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEACAGV-GEDESKHELTA---SVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRAFFYWRLRRRLAEFDLRRKVKTTGRGGGGRGRPLADPSVDALGASALLGEWFSEENEGNNGDWDADKAVLRWM 666
            +IVDALVA+ QP+FVYIPPHAELRGGAWVVVD T++++VMEMYAA  ARGGVLEPNGAA IKFR++D + TAHRLD  L+ +D+++    G  G  E   E+ A    +K RE  + GVY QVAVQFADLHDTPGRM A G +R+VVP+A++R+FFYWRLRRRLAEF LR++V     G GGR     +  +  L AS LL  W+          W+ D+ VL WM
Sbjct: 2082 MIVDALVAFAQPIFVYIPPHAELRGGAWVVVDPTIHSEVMEMYAATEARGGVLEPNGAAEIKFREKDYVATAHRLDRQLQGMDARMRELEGKEGGKERDAEVKALQKEIKERENALKGVYAQVAVQFADLHDTPGRMAAVGVIRQVVPWAQARSFFYWRLRRRLAEFHLRKEVFKAAGGKGGR-----EGGMSLLQASVLLKSWYVSTPGKTAEGWEEDREVLGWM 2302
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BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Match: A0A7S0C2A7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C2A7_9STRA)

HSP 1 Score: 225 bits (574), Expect = 4.970e-70
Identity = 117/223 (52.47%), Postives = 156/223 (69.96%), Query Frame = 1 
Query:    1 LIVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADG-ARGGVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEACAGVGEDESKHELTASVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRAFFYWRLRRRLAEFDLRRKVKTTGRGGGGRGRPLADPSVDALGASALLGEWFSEENEGNNGDWDADKAVLRWM 666
            +IVD+ VAY+QP+FV+IPP+AE+RGGAWVVVD ++N  VMEMYA  G ARGGVLE NG AS+K+R +DL+ T HRLD VL  LD+KL+       DE ++E   S+  RE +++ VY Q+AVQF +LHDTPGRM+A G +   V +  SR+FF+WRLRR+LAEFDLR+K++  G      GR +   S+  + ASAL+ EWF +     N  W+ DK +L WM
Sbjct:   32 MIVDSFVAYEQPIFVFIPPYAEIRGGAWVVVDPSINPAVMEMYATSGTARGGVLEANGVASVKYRTKDLISTMHRLDDVLIALDAKLKERIT---DEVRNETEDSITKREQSLLPVYEQIAVQFCELHDTPGRMKAVGVIENEVEWKNSRSFFFWRLRRKLAEFDLRKKMQQAG----DVGRSVK--SLSPIEASALMKEWFLQTPSMTNSMWNDDKVMLSWM 245
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6968.14907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K608_9PHAE9.570e-9371.88Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP... [more]
D7G0I9_ECTSI5.450e-9081.66Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus... [more]
W7T6R6_9STRA2.310e-8057.96Acetyl-carboxylase alpha n=1 Tax=Nannochloropsis g... [more]
A0A4D9CUA8_9STRA9.510e-7958.85CoA carboxyltransferase C-terminal domain-containi... [more]
A0A835YMY6_9STRA1.750e-7661.26Acetyl-CoA carboxylase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2I8N6_9STRA3.350e-7555.31Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2A5F5_9STRA1.920e-7054.26Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A812R0U4_SYMMI4.720e-7053.60AccA protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A0B4L7U5_9STRA4.920e-7056.64Acetyl-CoA carboxylase (Fragment) n=1 Tax=Nannochl... [more]
A0A7S0C2A7_9STRA4.970e-7052.47Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6968contigH-paniculata_contig6968:3619..5626 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.4
Seed ortholog evalue3.3e-57
Seed eggNOG ortholog159749.K0R0D3
Preferred nameACACB
KEGG rclassRC00040,RC00253,RC00367
KEGG koko:K01946,ko:K11262
KEGG ReactionR00742,R04385,R04386
KEGG Pathwayko00061,ko00254,ko00620,ko00640,ko01100,ko01110,ko01212,ko04152,ko04910,ko04920,ko04922,ko04931,map00061,map00254,map00620,map00640,map01100,map01110,map01212,map04152,map04910,map04920,map04922,map04931
KEGG ModuleM00082
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000902,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001101,GO:0001650,GO:0001676,GO:0001894,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0003989,GO:0004075,GO:0005102,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005783,GO:0005789,GO:0005829,GO:0005856,GO:0005975,GO:0005976,GO:0005977,GO:0006073,GO:0006082,GO:0006084,GO:0006091,GO:0006109,GO:0006112,GO:0006139,GO:0006163,GO:0006164,GO:0006355,GO:0006606,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006638,GO:0006639,GO:0006641,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006853,GO:0006869,GO:0006886,GO:0006913,GO:0006996,GO:0006997,GO:0006998,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009374,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009744,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009987,GO:0009991,GO:0010033,GO:0010256,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0010876,GO:0010883,GO:0010884,GO:0010906,GO:0012505,GO:0014070,GO:0015031,GO:0015629,GO:0015711,GO:0015718,GO:0015833,GO:0015849,GO:0015908,GO:0015909,GO:0015980,GO:0016020,GO:0016043,GO:0016053,GO:0016421,GO:0016874,GO:0016879,GO:0016885,GO:0017038,GO:0017076,GO:0018130,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019222,GO:0019432,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0019842,GO:0019867,GO:0019899,GO:0019900,GO:0019904,GO:0022607,GO:0030554,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031406,GO:0031667,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0031998,GO:0031999,GO:0032365,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032810,GO:0032870,GO:0032879,GO:0032989,GO:0033036,GO:0033218,GO:0033293,GO:0033365,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034220,GO:0034285,GO:0034504,GO:0034613,GO:0034641,GO:0034654,GO:0034694,GO:0034695,GO:0035257,GO:0035337,GO:0035383,GO:0035384,GO:0035639,GO:0036094,GO:0040008,GO:0040029,GO:0042175,GO:0042221,GO:0042493,GO:0042592,GO:0042759,GO:0042802,GO:0042886,GO:0043086,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0043933,GO:0044042,GO:0044085,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044432,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045017,GO:0045184,GO:0045540,GO:0045833,GO:0045893,GO:0045922,GO:0045927,GO:0045935,GO:0046320,GO:0046322,GO:0046390,GO:0046394,GO:0046460,GO:0046463,GO:0046483,GO:0046486,GO:0046620,GO:0046622,GO:0046890,GO:0046907,GO:0046942,GO:0046949,GO:0046966,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048638,GO:0048639,GO:0048856,GO:0048869,GO:0048871,GO:0048878,GO:0050662,GO:0050692,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050810,GO:0050896,GO:0050994,GO:0050995,GO:0051094,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051427,GO:0051641,GO:0051649,GO:0051716,GO:0055085,GO:0055086,GO:0055088,GO:0055114,GO:0060249,GO:0060255,GO:0060420,GO:0060421,GO:0061024,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070542,GO:0070727,GO:0070887,GO:0071229,GO:0071310,GO:0071322,GO:0071324,GO:0071329,GO:0071379,GO:0071380,GO:0071396,GO:0071398,GO:0071495,GO:0071616,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072594,GO:0080090,GO:0090181,GO:0090407,GO:0097009,GO:0097066,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0098588,GO:0098656,GO:0098805,GO:0098827,GO:0106118,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901576,GO:1901654,GO:1901655,GO:1901681,GO:1901700,GO:1901701,GO:1902001,GO:1902680,GO:1902930,GO:1903506,GO:1903508,GO:1903825,GO:1905039,GO:1905952,GO:1905954,GO:1990542,GO:1990837,GO:2000026,GO:2000112,GO:2001141,GO:2001293,GO:2001295
EggNOG free text desc.acetyl-CoA carboxylase
EggNOG OGs2XAV2@2836,COG0439@1,KOG0368@2759
EC2.1.3.15,6.3.4.14,6.4.1.2
COG Functional cat.I
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons4
Model size666
Cds size666
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6968.14907.1prot_H-paniculata_contig6968.14907.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6968 3619..5626 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930837.5441773-CDS-H-paniculata_contig6968:3618..37381622930837.5441773-CDS-H-paniculata_contig6968:3618..3738Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6968 3619..3738 -
1691481474.815573-CDS-H-paniculata_contig6968:3618..37381691481474.815573-CDS-H-paniculata_contig6968:3618..3738Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6968 3619..3738 -
1622930837.5566144-CDS-H-paniculata_contig6968:4470..48021622930837.5566144-CDS-H-paniculata_contig6968:4470..4802Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6968 4471..4802 -
1691481474.8263452-CDS-H-paniculata_contig6968:4470..48021691481474.8263452-CDS-H-paniculata_contig6968:4470..4802Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6968 4471..4802 -
1622930837.568456-CDS-H-paniculata_contig6968:4990..50791622930837.568456-CDS-H-paniculata_contig6968:4990..5079Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6968 4991..5079 -
1691481474.8346817-CDS-H-paniculata_contig6968:4990..50791691481474.8346817-CDS-H-paniculata_contig6968:4990..5079Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6968 4991..5079 -
1622930837.5825663-CDS-H-paniculata_contig6968:5501..56261622930837.5825663-CDS-H-paniculata_contig6968:5501..5626Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6968 5502..5626 -
1691481474.8430283-CDS-H-paniculata_contig6968:5501..56261691481474.8430283-CDS-H-paniculata_contig6968:5501..5626Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6968 5502..5626 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6968.14907.1

>prot_H-paniculata_contig6968.14907.1 ID=prot_H-paniculata_contig6968.14907.1|Name=mRNA_H-paniculata_contig6968.14907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp
LIVDALVAYKQPVFVYIPPHAELRGGAWVVVDSTVNADVMEMYAADGARG
GVLEPNGAASIKFRDRDLLKTAHRLDPVLRELDSKLEACAGVGEDESKHE
LTASVKARETTVIGVYRQVAVQFADLHDTPGRMEARGAVRKVVPFAESRA
FFYWRLRRRLAEFDLRRKVKTTGRGGGGRGRPLADPSVDALGASALLGEW
FSEENEGNNGDWDADKAVLRWM
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mRNA from alignment at H-paniculata_contig6968:3619..5626-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6968.14907.1 ID=mRNA_H-paniculata_contig6968.14907.1|Name=mRNA_H-paniculata_contig6968.14907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2008bp|location=Sequence derived from alignment at H-paniculata_contig6968:3619..5626- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGATCGTGGATGCTCTGGTGGCCTACAAGCAGCCAGTCTTCGTCTATAT
TCCTCCGCATGCTGAACTAAGGGGCGGGGCCTGGGTTGTGGTGGACAGCA
CCGTCAATGCTGATGTCATGGAGATGTGAGCGCCCCAACGAGCCAAAAGA
CAAAGGAAGCTAAGCTGTATATGTCGAATGGTGGAGCGATTTATTTGTCG
TGGTCTGATTGTTTGTGTTGCCTTGATACCGCTCTGTTTTTAGCCTGGGG
TAGTTTGTTGTAATTTGCCCTGTGATGTTTTTTGTGTGATGTGTTGGTGT
CTTCGGTTCTGCCCTTCTTTTATCTTATGTAGAGTTGTCAGGTGGTGAAT
GTAGAAGAAATTAATGCTTATGGCTGATTTTTTTTTCGAACCTTGGGCTT
GTAGCTATAGTGTGTAGCTTGTCCACAGACGCGTTGTTGGGTGTCTTTCT
ATCTATTTTTCTCTTTCTATGGTGTTCGCGTCGTTTCGTGTATGTCGTGT
TATAGCGTCAACTAATGAATATGCCTGTATTTTTTGTTTGTGTCTAGGTA
TGCTGCGGACGGGGCTAGAGGAGGTGTGTTGGAGCCCAACGGTGCCGCAA
GTATCAAGTTCCGAGACAGGGATCTGCTCAAGACAGGTAGGTAGCTCTTT
TGTACCGTTCATATTATCTTTTCGTTTTTCCCGTGTACCTTCATTCACAC
ATCCGTTCACTCCGCTGGTATTTACCGTCACGTCTTGAATGGATATACGT
GGTAAATATTTTGCGAACTCATCCCCCCTCCGCTCCTGCCGCTACCGTCA
CCCCCAAAACCATCCAACACACAGCTCACCGTTTGGACCCAGTGTTGCGA
GAACTCGACAGCAAGCTGGAGGCGTGTGCCGGAGTCGGGGAGGATGAAAG
CAAGCACGAGCTGACAGCATCAGTCAAGGCGAGGGAGACCACGGTCATCG
GAGTCTACCGTCAAGTGGCGGTGCAGTTTGCCGATCTACACGACACCCCT
GGACGGATGGAGGCCAGGGGTGCAGTGAGGAAAGTGGTGCCTTTCGCAGA
GTCGAGAGCATTCTTCTACTGGAGATTAAGGAGAAGGCTTGCCGAGTTTG
ACCTCAGGAGGAAGGTAAAAACGACAGGGAGGGGGGGGGGGGGGAGGGGG
AGGCCTGTATCATATCATAAATGTTAAACATTACTTGACCTGGAGATTGG
CTCGTGCAATTTACTCTGCTGTTGAGTCATGATGATGATGATGATTGATA
CATTCCACAAAACCCAACGGAATTAGGGGTTGCATTCTGTCCCGGTGTCT
ATTCTGTTTTTGTTTGGTGCAGTATGTCATGTGCTATGTTGCTGAGGTTG
CCAGCGCGCAACAGACGTGCCTTTTGTCTCCAGAGCATGTGTAAACCTCG
TCATTTGTTGGAAATGTGATTTCCGATTTCCCTGTGTTTGTTGTGAAGGC
GCTTTTACTGTGCACGATTAGTTTCGATTTCGATTTCAATTTTGACGGGA
TACTGGTGTGTACCGTCTGATGATTTGTCGTGAATCACCCACCGTTTGCA
TCAAGTACTTGATTTTTGTGCTGGAGTAAGTTGGTGCGGCCTAAGGGTAG
AGTAGTCAGAGATCACGATTATAATTTCATTGTCAAAAAAGGATTGCACC
TGAAGTATCAGTACATAAGTAGACACGCAAAGCTAGTGCGTGCAATAGTG
AAACATCTGGTGTTCGCCCCGCCTCCCCTCCCTACCCCCCCCCCACTGCC
ATTAGATGATCTCTAACATTCTTCTTGCGTACTGTTTGCGTTGAACTGCT
GCTTGGCTTGTATTGGTGTTGTGTGTTTGGTTTGTTTCGCTTTCCTTTAT
CCCTTCGTGCCCCGTTCAATATTATTATATAGATTAAGTTGGCAGATCCG
TCGGTGGATGCTTTGGGCGCCAGTGCGCTTCTTGGGGAATGGTTCTCGGA
AGAGAATGAGGGCAATAACGGCGACTGGGATGCGGACAAGGCTGTGCTCC
GCTGGATG
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Coding sequence (CDS) from alignment at H-paniculata_contig6968:3619..5626-

>mRNA_H-paniculata_contig6968.14907.1 ID=mRNA_H-paniculata_contig6968.14907.1|Name=mRNA_H-paniculata_contig6968.14907.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at H-paniculata_contig6968:3619..5626- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGATCGTGGATGCTCTGGTGGCCTACAAGCAGCCAGTCTTCGTCTATAT
TCCTCCGCATGCTGAACTAAGGGGCGGGGCCTGGGTTGTGGTGGACAGCA
CCGTCAATGCTGATGTCATGGAGATTTGATCGTGGATGCTCTGGTGGCCT
ACAAGCAGCCAGTCTTCGTCTATATTCCTCCGCATGCTGAACTAAGGGGC
GGGGCCTGGGTTGTGGTGGACAGCACCGTCAATGCTGATGTCATGGAGAT
GTATGCTGCGGACGGGGCTAGAGGAGGTGTGTTGGAGCCCAACGGTGCCG
CAAGTATCAAGTTCCGAGACAGGGATCTGCTCAAGACAGGTATGCTGCGG
ACGGGGCTAGAGGAGGTGTGTTGGAGCCCAACGGTGCCGCAAGTATCAAG
TTCCGAGACAGGGATCTGCTCAAGACAGCTCACCGTTTGGACCCAGTGTT
GCGAGAACTCGACAGCAAGCTGGAGGCGTGTGCCGGAGTCGGGGAGGATG
AAAGCAAGCACGAGCTGACAGCATCAGTCAAGGCGAGGGAGACCACGGTC
ATCGGAGTCTACCGTCAAGTGGCGGTGCAGTTTGCCGATCTACACGACAC
CCCTGGACGGATGGAGGCCAGGGGTGCAGTGAGGAAAGTGGTGCCTTTCG
CAGAGTCGAGAGCATTCTTCTACTGGAGATTAAGGAGAAGGCTTGCCGAG
TTTGACCTCAGGAGGAAGGTAAAAACGACAGGGAGGGGGGGGGGGGGGAG
GGGGAGGCCTCTCACCGTTTGGACCCAGTGTTGCGAGAACTCGACAGCAA
GCTGGAGGCGTGTGCCGGAGTCGGGGAGGATGAAAGCAAGCACGAGCTGA
CAGCATCAGTCAAGGCGAGGGAGACCACGGTCATCGGAGTCTACCGTCAA
GTGGCGGTGCAGTTTGCCGATCTACACGACACCCCTGGACGGATGGAGGC
CAGGGGTGCAGTGAGGAAAGTGGTGCCTTTCGCAGAGTCGAGAGCATTCT
TCTACTGGAGATTAAGGAGAAGGCTTGCCGAGTTTGACCTCAGGAGGAAG
GTAAAAACGACAGGGAGGGGGGGGGGGGGGAGGGGGAGGCCTTTGGCAGA
TCCGTCGGTGGATGCTTTGGGCGCCAGTGCGCTTCTTGGGGAATGGTTCT
CGGAAGAGAATGAGGGCAATAACGGCGACTGGGATGCGGACAAGGCTGTG
CTCCGCTGGATGTTGGCAGATCCGTCGGTGGATGCTTTGGGCGCCAGTGC
GCTTCTTGGGGAATGGTTCTCGGAAGAGAATGAGGGCAATAACGGCGACT
GGGATGCGGACAAGGCTGTGCTCCGCTGGATG
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