prot_H-paniculata_contig6967.14905.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6967.14905.1
Unique Nameprot_H-paniculata_contig6967.14905.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
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BLAST of mRNA_H-paniculata_contig6967.14905.1 vs. uniprot
Match: A0A6H5KJ27_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ27_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 8.310e-44
Identity = 75/113 (66.37%), Postives = 87/113 (76.99%), Query Frame = 0 
Query:   11 GGACYCFNVFEDRRNPENNLVVDADRYRGVAALFNHTCCNANVEVRKLVANNADPRFPVHGFFARRKIEIKDNRM-PELVFNYGTRETPNPCLCDSCEGVR-RSRSEAHPRLR 121
            GG CYCFNV+ DRR PE+N+VVDADRYRGVAALFNH CC ANV+VRKLVANN D R P+HGFFA +KI +K+    PELVFNYG +E P PCLC +C  +  R  S+A  RLR
Sbjct:  416 GGPCYCFNVYTDRRCPEDNIVVDADRYRGVAALFNHACCGANVKVRKLVANNTDRREPIHGFFALKKIVVKEGSPGPELVFNYGAKEKPKPCLCSACAELELRKLSDAPARLR 528
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BLAST of mRNA_H-paniculata_contig6967.14905.1 vs. uniprot
Match: D7G1M9_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M9_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 5.050e-43
Identity = 75/113 (66.37%), Postives = 87/113 (76.99%), Query Frame = 0 
Query:   11 GGACYCFNVFEDRRNPENNLVVDADRYRGVAALFNHTCCNANVEVRKLVANNADPRFPVHGFFARRKIEIKDNRM-PELVFNYGTRETPNPCLCDSCEGVR-RSRSEAHPRLR 121
            GG CYCFNV+ DRR PE+N+VVDADRYRGVAALFNH CC ANV+VRKLVANN D R P+HGFFA +KI +K+    PELVFNYG +E P PCLC +C  +  R  S+A  RLR
Sbjct:  590 GGPCYCFNVYTDRRCPEDNIVVDADRYRGVAALFNHACCGANVKVRKLVANNTDRREPIHGFFALKKIVVKEGSPGPELVFNYGAKEKPKPCLCSACAELELRKLSDAPARLR 702
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6967.14905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ27_9PHAE8.310e-4466.37SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G1M9_ECTSI5.050e-4366.37SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.270.10coord: 1..109
e-value: 7.5E-17
score: 63.9
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 13..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6967contigH-paniculata_contig6967:758..1931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6967.14905.1mRNA_H-paniculata_contig6967.14905.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6967 758..3383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6967.14905.1 ID=prot_H-paniculata_contig6967.14905.1|Name=mRNA_H-paniculata_contig6967.14905.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
RDRREGPSGGGGACYCFNVFEDRRNPENNLVVDADRYRGVAALFNHTCCN
ANVEVRKLVANNADPRFPVHGFFARRKIEIKDNRMPELVFNYGTRETPNP
CLCDSCEGVRRSRSEAHPRLR*
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