prot_H-paniculata_contig6877.14794.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6877.14794.1
Unique Nameprot_H-paniculata_contig6877.14794.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1726
Homology
BLAST of mRNA_H-paniculata_contig6877.14794.1 vs. uniprot
Match: A0A6H5KFG5_9PHAE (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFG5_9PHAE)

HSP 1 Score: 758 bits (1957), Expect = 9.300e-240
Identity = 662/1706 (38.80%), Postives = 818/1706 (47.95%), Query Frame = 0
Query:    1 MAMGGG----GDGLLTRDADTMTEYVLLMSAEALGEEQTGTVGAAAPERILNERWHQ----------PGLSMSEALDRAAARSIRPHHISHLLPLLAAMRPSSSSGAWGRTAIYTPLADGKRKGNDVAARMSTSEAAGVSAAEGGTTVGAVAMPPH----GAKRRRIDPNAIMCPFELNGVCNDDDCRYQHMDAFLR----GSSSPQTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDKPHFLPGIQFVERTVEARTSQQQKAPRSSGXXXXXXPPGPERAKPIESETEDIEQHAVGRGIEGGRAAGGDGGVVVGARPGDGKGD-EEGSGSDSG----------GGDDFLALPKEL---KGGVSAKASDDKVIMNNSGVVDASPSALAKSFAQTVSGVVGGSSVEXXXXXXXXXXXXXXXXEERYYSGDTEGEGEGASQSEALVALTEDQLIALEARLSEDEACDVEGWLLVAMHRLPRTGQSAMAVLNAVQRIPSSNE----STDDAVLKPALRVIVKGLEKCEQGQAEELWALYLTLYALVPGFSADAVDMAEEQIDNFFASRRMWRLYCCISQRRAPGGRQSLRDKIALHWRRIEVLLEPADDVDDDAPPPTQVTAAESTATAEASPEDTTERQRETAATARLSSVMAVQEAAPTVDDDGDEDGVSRAKDVSLAAAGSAVGDAGDVGDLSLLSAPVGVESGAAASSTNTAXXXXXXXXXXXXTAAEGGEASDRAGDEHVPLGSDTLGMIAYLVLERCSVLAQAGYVLQANAEVLEALG---QSKLLRAW-YDEGEARRSLLRV---PGKESDG-GQGVAEGARDGNNDASGEHVEGGGL-LPQGIAETFHAAPREMRCLLWLTVLHLLVMGVMPTHAIIVAEDVGRIYVDTADGVNAADENPSTLRRRSDVLQWPKESLSSDSPAGKRLAASAELRDLTNRIFMSALQDAELVPSTDGRVGSWAPPLRVQDALLPSAVEAHAARAGGMAPAPSALQGASLALALNWLTFCCRREKSVGEEQQEVRTVALACCRRFQLTRPDNPAFLEHTLLEHGVLWKKRSLGDVYQEISYAFGENGAAEVARRERGEEGGEGVMHSAVKIAEGDALS------PSGGCLEAVYAFLRFLEAR------ESDRCVRADPAARAAAAAFSPKTDAARAVLREALVDLWVKTAQQPQLG--------GKINANAWLRNSEDEKLCRAMEGAKASLFRWADGKGGXXXXXXXVSLSAERQLSTVFVALWVLGGPATAIGTLDHVLSAESFSNMPPGRRRMLWLQRLEAAAVLSEQVSSLVAAGTGDPMHGLREVALRALADHRARPRCA----YKTLAHYVACTLEQRP------EDEGGA-----------ADVVFLSAASVSWFAHDVLTVYADRFRAVKRGGVDWLIVAEALDSAGVENRRSHGGSRGEAPPGGVLALLNWVDRAHIAAAVAGQSGMDSEASERAKATAM-------VLRSNARPYAEKALATHGARDPGLAGAAAALEAATGRPDRAQRILEAALREQPLCSCLWESRLALEAGFGGGSRERARTTVEAAASSGALLRLRCDVGLATWRELNSNAGENAVVHGGRTVGRVLGAISNPQSRRETRSLSLLGALIGG-GSGGREGQTTALPIPQVPRSLFLLTNLVSLSLAGNGLLA 1608
            MA+GGG    GD LLTRDA T+ EY+ LMS E LGEE  G       +R + ERWHQ          PGLS++EALD+A A + RP  + +LL L AA+RP  SS                                                 P     GAKRRR+D NAIMCPFELNGVCNDDDCRYQH+D +L     G+SS   S                                                          H LP I F   T  A+     +A R +G      P     ++   SET  +   A     EGG A   D             G+ EE    DSG              FLALP E     GG   +AS             ASP+ALAK+FA   SG +                      EERYY    EG G+G +Q  A  AL +DQL ALEA+L+E  +CDVEGWLL+AMH+LPR G SA AVLN +  +         S D A +K ALR  V+ LE+ +  QAE LW LYL L+A +PG S DA+ MAE  ++ F  SRR+WRLY  + Q  +PG   SL + ++ + R+IE LL              Q  AA+      ASP+D                                                                       G+        XXXXXXXXXXXX                       + MI YLVLERCS+LA+AGY LQA AEVL++LG   + + L  W   +G+ RR+LLR     G E +G G G        N   S E  +  G  LP G+A     APR+ RC+LWLT LHLLVMGV P HA+ +AE+ G        G+  +++  +     + +L WP E LS  S A  RL+AS +L+D T + FM+AL D  L+P    + G WAP ++ +DALL SA EA AARAGGMAP  SAL+G  L LALNWL FC RR +    + ++ R +A ACCRRFQL+RPD PA LEH LLEH V  K R+LGD Y EIS AF  +G A  A RER +  G+    +       D  S      PSG  ++AVYAFLRF+E+R      ES+    AD  A           + AR VLR+ALV +W   +               +  +  WL     E + +A+EGAKASLFRWADG  G          + ERQLST+  +LWVLGG + AIG+LDH+LSAESFS +   R+R+ WLQRLEAA +LS Q      A   D M G+REVALRALADHR   RC     Y +LAH+VA TL++ P       D GG            A +   S+AS S FA DVLTVYA+ FR  KRGGVDW++ AEAL                    GGV A                      +  E   ATA         L++NARPY E ALA + A D  L GA AAL AATG PD AQR+LEAALR  P C+ LWE R+ALEAGFG GS ERA  T  AAA S  +LRLRC   L          G+       RT GR+  AIS+P SRRE +S SL  AL    GS        A+   +VPRS+FL+T+L SLSLA NGLL+
Sbjct:   66 MAIGGGMVPGGDDLLTRDAGTIAEYIRLMSFEMLGEESQGR------DRPV-ERWHQVGASIRRRLVPGLSLTEALDKAEATAARPARLPNLLALAAAIRPVDSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEPRAEAPGAKRRRVDANAIMCPFELNGVCNDDDCRYQHLDVYLPPLNPGTSSAPISASAAANVQPAKSSASGPGSTSPVPGPLAAAAARTDERASALGQ---------------HRLPAIDF---TGAAKRDAVARA-RENGRRGVVKPSS---SRQPTSETGGVTPTAA----EGGTA---DQXXXXXXXXXXXXGELEEADAVDSGEXXXXXXXXXXXXXFLALPTERAENNGGDGGEASSGTAAAPE----QASPAALAKAFALAASGALASGG---RGNVVRGAGGSGVGREERYY---LEG-GDGKTQGAASAALPDDQLSALEAKLNEGASCDVEGWLLLAMHQLPRAGGSAKAVLNTISDVACGASGPMGSVDQAAVKSALRTFVRPLERADGAQAEVLWLLYLRLFAFLPGKSDDALGMAEYALEKFPTSRRIWRLYHSMLQT-SPGW--SLPEDVSCYRRQIEALLL------------LQPRAADM----RASPQD-----------------------------------------------------------------------GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEVKMIVYLVLERCSLLAEAGYKLQAAAEVLDSLGALAEGQPLWGWDARDGQGRRTLLRTFEGGGHEREGEGNGATRXXGGANAGGSTEASDDNGQRLPAGVAAALKHAPRDSRCVLWLTALHLLVMGVFPRHALTLAENDG-------GGLGGSNDTTAAGGDLAALLLWPTEWLSPKSSAILRLSASPDLQDATLKTFMTALSDVGLLPPPRSQ-GCWAPAIKDRDALLSSAAEAKAARAGGMAPDASALEGPPLVLALNWLAFCLRRGRV---DARQGRMMAFACCRRFQLSRPDQPALLEHFLLEHAVS-KTRTLGDTYHEISRAFDADGVAAGALRERRDGEGKSASLNPAGARRRDEQSVNLVPPPSGERIQAVYAFLRFVESRLEAARSESESANDADRGA----------LEDARRVLRDALVGMWTGVSSXXXXXXXXXXXXXARSESYRWLEEEGGESVRQALEGAKASLFRWADGGSGGCDAPGG---NGERQLSTIVFSLWVLGGASAAIGSLDHILSAESFSGVSAERKRLAWLQRLEAAIILSTQQRRKQQASGVDAMQGVREVALRALADHRTERRCVLPAEYPSLAHFVAATLDRPPATESPVRDSGGQPGKSISRDPPFASLATDSSASSSSFACDVLTVYANHFREAKRGGVDWVVAAEAL--------------------GGVSAAXXXXXXXXXXXXXXXXXXXXXDHDESGAATAASSVDGASALKANARPYVEMALAMNPA-DTALCGAVAALWAATGSPDLAQRVLEAALRAHPYCAELWEQRVALEAGFGSGSTERAGATAAAAAGSRVMLRLRCGGKL---------GGQTPSGLQARTAGRIATAISHPTSRREIKSFSLQAALRAPPGSSAPVAAAGAMATIEVPRSIFLMTSLTSLSLAFNGLLS 1579          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6877.14794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KFG5_9PHAE9.300e-24038.80C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 1666..1688
e-value: 7.6
score: 14.2
coord: 1617..1640
e-value: 0.36
score: 19.9
coord: 1593..1616
e-value: 5.1
score: 15.7
coord: 1689..1713
e-value: 91.0
score: 5.4
IPR019607Putative zinc-finger domainPFAMPF10650zf-C3H1coord: 155..174
e-value: 2.1E-9
score: 36.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1574..1724
e-value: 4.3E-26
score: 93.2
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 1583..1722
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1589
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1590..1613
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1614..1725
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1587..1724
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 1643..1664
score: 6.049
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 1619..1641
score: 7.181
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 1595..1617
score: 5.548
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 1668..1689
score: 7.065
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 150..176
score: 9.225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6877contigH-paniculata_contig6877:1843..11952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6877.14794.1mRNA_H-paniculata_contig6877.14794.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6877 1843..11952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6877.14794.1 ID=prot_H-paniculata_contig6877.14794.1|Name=mRNA_H-paniculata_contig6877.14794.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1726bp
MAMGGGGDGLLTRDADTMTEYVLLMSAEALGEEQTGTVGAAAPERILNER
WHQPGLSMSEALDRAAARSIRPHHISHLLPLLAAMRPSSSSGAWGRTAIY
TPLADGKRKGNDVAARMSTSEAAGVSAAEGGTTVGAVAMPPHGAKRRRID
PNAIMCPFELNGVCNDDDCRYQHMDAFLRGSSSPQTSTSTATVAATGRIQ
PSTTSTTASSASGDNQSKDRRAPVPTAMGVAAAAAAAAAAARDKPHFLPG
IQFVERTVEARTSQQQKAPRSSGSAGGGGPPGPERAKPIESETEDIEQHA
VGRGIEGGRAAGGDGGVVVGARPGDGKGDEEGSGSDSGGGDDFLALPKEL
KGGVSAKASDDKVIMNNSGVVDASPSALAKSFAQTVSGVVGGSSVEGGGG
GSRVKAKNGGRREERYYSGDTEGEGEGASQSEALVALTEDQLIALEARLS
EDEACDVEGWLLVAMHRLPRTGQSAMAVLNAVQRIPSSNESTDDAVLKPA
LRVIVKGLEKCEQGQAEELWALYLTLYALVPGFSADAVDMAEEQIDNFFA
SRRMWRLYCCISQRRAPGGRQSLRDKIALHWRRIEVLLEPADDVDDDAPP
PTQVTAAESTATAEASPEDTTERQRETAATARLSSVMAVQEAAPTVDDDG
DEDGVSRAKDVSLAAAGSAVGDAGDVGDLSLLSAPVGVESGAAASSTNTA
AATVGAANGGAATAAEGGEASDRAGDEHVPLGSDTLGMIAYLVLERCSVL
AQAGYVLQANAEVLEALGQSKLLRAWYDEGEARRSLLRVPGKESDGGQGV
AEGARDGNNDASGEHVEGGGLLPQGIAETFHAAPREMRCLLWLTVLHLLV
MGVMPTHAIIVAEDVGRIYVDTADGVNAADENPSTLRRRSDVLQWPKESL
SSDSPAGKRLAASAELRDLTNRIFMSALQDAELVPSTDGRVGSWAPPLRV
QDALLPSAVEAHAARAGGMAPAPSALQGASLALALNWLTFCCRREKSVGE
EQQEVRTVALACCRRFQLTRPDNPAFLEHTLLEHGVLWKKRSLGDVYQEI
SYAFGENGAAEVARRERGEEGGEGVMHSAVKIAEGDALSPSGGCLEAVYA
FLRFLEARESDRCVRADPAARAAAAAFSPKTDAARAVLREALVDLWVKTA
QQPQLGGKINANAWLRNSEDEKLCRAMEGAKASLFRWADGKGGGGGGGDG
VSLSAERQLSTVFVALWVLGGPATAIGTLDHVLSAESFSNMPPGRRRMLW
LQRLEAAAVLSEQVSSLVAAGTGDPMHGLREVALRALADHRARPRCAYKT
LAHYVACTLEQRPEDEGGAADVVFLSAASVSWFAHDVLTVYADRFRAVKR
GGVDWLIVAEALDSAGVENRRSHGGSRGEAPPGGVLALLNWVDRAHIAAA
VAGQSGMDSEASERAKATAMVLRSNARPYAEKALATHGARDPGLAGAAAA
LEAATGRPDRAQRILEAALREQPLCSCLWESRLALEAGFGGGSRERARTT
VEAAASSGALLRLRCDVGLATWRELNSNAGENAVVHGGRTVGRVLGAISN
PQSRRETRSLSLLGALIGGGSGGREGQTTALPIPQVPRSLFLLTNLVSLS
LAGNGLLALPAALGNLLTTLRSLDASSNALTSLPPTLSRLSESLRVLRLT
NNQLPSPLANSPLGNLTSLRFLDLEGNRLSQFPTLVMGLPELRTLKLARN
RFSPRAPPRLSDALPKLEELTLPDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR019607Putative_zinc-finger_domain
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR000571Znf_CCCH