mRNA_H-paniculata_contig687.14786.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Match: A0A6H5L173_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L173_9PHAE) HSP 1 Score: 431 bits (1109), Expect = 3.620e-133 Identity = 255/402 (63.43%), Postives = 281/402 (69.90%), Query Frame = 3
Query: 846 AALDDLASED-GAQTACLVEVPARQQSKLAPYKPGKMTVVLDMDECLLHSKFHGPGAATEAYRQCEERPDAVIELGVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDHIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGVLVASFYDDPADTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRNALFDDGDEESLVVGGSSPGLEDDSHCEDDGDVSSAGELSDDDLLGEVDELERGGVQSVPTTSSSSQGSLFSSEEERELECGLAVE-------------------------------EREGEIIRAVKDDDD-ESVKTEACSEESGESSIG-ESLTSGEDMEMDLEF 1949
AA+ +AS+ G Q +V + ++LAPYKPGKMTVVLDMDECLLHSKFHGPGAA+EAYRQ EERP+AV E VNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLD+IDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNG+LVASFYDDP DTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYR ALFDD EDD DV +VD + + +G L + ++ER E +GE + +KDDDD ESVKTEACSE SG+SS+G ESLTS E+ME++LEF
Sbjct: 94 AAVGGMASDQQGKQVGPIV---VARHTRLAPYKPGKMTVVLDMDECLLHSKFHGPGAASEAYRQLEERPNAVNE--VNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRAALFDD---------------------EDDADV-------------DVDCI----LDXXXXXXXLLEGCLEAGQQERTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELQGEDVECLKDDDDDESVKTEACSEGSGDSSLGDESLTSREEMELELEF 452
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Match: D7FM26_ECTSI (Putative nuclear LIM interactor-interacting protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM26_ECTSI) HSP 1 Score: 408 bits (1048), Expect = 1.760e-126 Identity = 231/337 (68.55%), Postives = 248/337 (73.59%), Query Frame = 3
Query: 951 MTVVLDMDECLLHSKFHGPGAATEAYRQCEERPDAVIELGVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDHIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGVLVASFYDDPADTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRNALFDDGDEESL--VVGGSSPGLEDDSHCEDDGDVSSAGELSDDDLLGEVDELERGGVQSVPTTSSSSQGSLFSSEEERELECGLAVEEREGEIIRAVKDDDD-ESVKTEACSEESGESSIG-ESLTSGEDMEMDLEF 1949
MTVVLDMDECLLHSKFHGPGAA+EAYRQ EERPDAV E VNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLD+IDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNG+LVASFYDDP DTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYR ALFDD D+ + ++ G ++ +GE + +KDDDD ESVKTEACSE SG+SS+G ESLTS E+ME++LEF
Sbjct: 1 MTVVLDMDECLLHSKFHGPGAASEAYRQLEERPDAVNE--VNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRTALFDDDDDADVDCILXXXXXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSANGDGQQQLQGEDVECLKDDDDDESVKTEACSEGSGDSSLGDESLTSREEMELELEF 324
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Match: A0A836C7A9_9STRA (NLI interacting factor-like phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7A9_9STRA) HSP 1 Score: 271 bits (692), Expect = 2.550e-78 Identity = 147/232 (63.36%), Postives = 175/232 (75.43%), Query Frame = 3
Query: 882 QTACLVEVPARQQSKLAPYKPGKMTVVLDMDECLLHSKFHGPGAATEAYRQCEERPDAVIELGVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDHIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLG-VESTDMSRTVLVDNNPLSFICQPTNGVLVASFYDDPADTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRNALFDDGDE 1574
QTA E+P ++ A + ++TV+LDMDECLLHSKFHG G+ YRQ EERP+ + E VNSF + LDDG AQVN RPGL FLE LA+ + +VFTAAMPDYAGPVLD +DP G L +RLYRSSCRQV+GAFLKDLSVLG V R VL+DNNP SF+CQPTNG+LV SFYDD DTALASV+QL++HL+ A DVRPIL+DMFRL++LL EYR LF + DE
Sbjct: 8 QTASEAELPLGFKAASANLE--RLTVILDMDECLLHSKFHGLGSID--YRQQEERPEDIGE--VNSFCIPLDDG-VAQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAMLFPEEDE 232
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Match: A0A835Z333_9STRA (NLI interacting factor (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z333_9STRA) HSP 1 Score: 265 bits (677), Expect = 1.250e-77 Identity = 137/198 (69.19%), Postives = 156/198 (78.79%), Query Frame = 3
Query: 951 MTVVLDMDECLLHSKFHGPGAATEAYRQCEERPDAVIELGVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDHIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVE-STDMSRTVLVDNNPLSFICQPTNGVLVASFYDDPADTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGE 1541
+TVVLDMDECLLHSKFHG GA + YRQ E+RP+ V E VNSFW+ALDDG AQVN RPGL FLE LA+ + +VFTAAMPDYAGPVLD IDP G L RRLYR+SCRQV+G FLKDLS LG +T+ R VL+DNNP SF+CQPTNG+LV SFYDD DTALA VMQL+R L+ DVRPIL+DMFRL+ LL E
Sbjct: 1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGE--VNSFWLALDDG-VAQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 195
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Match: A0A836CB86_9STRA (Putative CTD small phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB86_9STRA) HSP 1 Score: 201 bits (512), Expect = 4.430e-55 Identity = 112/201 (55.72%), Postives = 142/201 (70.65%), Query Frame = 3
Query: 948 KMTVVLDMDECLLHSKFHGPGAATEAYRQCEERPDAVIELGVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDHIDPKGTLFHRRLYRSSCRQVKG-AFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGVLVASFYDDPADTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYR 1547
K+TVVLD+DECL+HS F P + YRQ E RP+ I L V+S + L + VN+RPGL FLE L+ DY+ +VFTA +YA VLD IDP+GT FH RLYR SCRQ +G +LKDL E+ + RTVLVDN+PLSFICQP+NG+LV+S+YDDP D AL+SV++LIRHLD DVRP L +F L+ +L EY+
Sbjct: 17 KLTVVLDLDECLVHSVF--PNG--DKYRQSEARPEN-INL-VDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEA--LERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQ 209
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Match: A0A662Y5D0_9STRA (FCP1 homology domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662Y5D0_9STRA) HSP 1 Score: 199 bits (506), Expect = 4.860e-54 Identity = 102/203 (50.25%), Postives = 137/203 (67.49%), Query Frame = 3
Query: 948 KMTVVLDMDECLLHSKFHGPGAATEAYRQCEERPDAVIELGVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDHIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGVLVASFYDDPADTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRNAL 1556
++ +VLDMDECL+HSKF YRQ E RP+ + G +SF + +DDG+ A VNKRPGLD FLE A+ ++ VFTA + Y P+LD +DPKG LF R +R+SC+Q KG FLKDLSV+ TD+SR +LVDNNP+SF+ QP+NG+ V SFYDD D L S+ +++ L + DVRP L +FRL LL E++ +
Sbjct: 42 RLALVLDMDECLVHSKFQNE----VEYRQSEYRPEELEAYG-DSFEIVMDDGERAVVNKRPGLDRFLEEAAKHFDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRASCQQRKGMFLKDLSVV---RTDLSRVILVDNNPVSFLLQPSNGIPVPSFYDDVNDRTLDSLTKVLASLQEVDDVRPRLHQLFRLADLLAEHQRVI 236
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Match: H3GXJ8_PHYRM (FCP1 homology domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3GXJ8_PHYRM) HSP 1 Score: 199 bits (505), Expect = 6.410e-54 Identity = 102/203 (50.25%), Postives = 135/203 (66.50%), Query Frame = 3
Query: 948 KMTVVLDMDECLLHSKFHGPGAATEAYRQCEERPDAVIELGVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDHIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGVLVASFYDDPADTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRNAL 1556
++ +VLDMDECL+HSKF YRQ E RP+ + + +SF + +DDG+ A VNKRPGLD FLE A+ Y+ VFTA + Y P+LD +DPKG LF R +R SC+Q KG FLKDLSV V D+SR +LVDNNP+SF+ QP+NG+ V SFYDD D L S+ +++ L + DVRP L +FRL LL E++ +
Sbjct: 40 RLALVLDMDECLVHSKFQNE----VEYRQSEFRPEQLEDFA-DSFEIVMDDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRESCQQRKGMFLKDLSV--VRGGDLSRVILVDNNPVSFLMQPSNGIPVPSFYDDANDRTLESLSKVLASLQEVEDVRPRLHQLFRLADLLAEHQRVI 235
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Match: A0A8K1CRD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRD5_PYTOL) HSP 1 Score: 197 bits (500), Expect = 3.000e-53 Identity = 103/220 (46.82%), Postives = 145/220 (65.91%), Query Frame = 3
Query: 897 VEVPARQQSKLAPYKPGKMTVVLDMDECLLHSKFHGPGAATEAYRQCEERPDAVIELGVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDHIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGVLVASFYDDPADTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRNAL 1556
V + Q++ P ++ +VLDMDECL+HSKF+ A YRQ E RP+++ E +SF + ++DG+ A V KRPGLD FLE ++ ++ VFTA + Y P+LD +DPKGT+F R +R SC+ KG FLKDL V+ +DMSR +LVDNNP+SF+ QP+NG+ V SFYDD AD L S+M+++ L + DVRP L +FRL LL E++ +
Sbjct: 23 VSAAKKLQARAPTPAPERIALVLDMDECLVHSKFYNEMAE---YRQDEYRPESLQEYE-DSFDIEMEDGERAIVYKRPGLDRFLEEASKHFDLYVFTAGLEAYGKPILDELDPKGTIFAGRFFRESCQMRKGMFLKDLRVV---RSDMSRVILVDNNPVSFLMQPSNGIPVPSFYDDAADRTLDSLMKVLMSLTEVEDVRPRLHQLFRLADLLSEHQRTI 235
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Match: A0A3M6VFT3_9STRA (FCP1 homology domain-containing protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VFT3_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.410e-52 Identity = 99/203 (48.77%), Postives = 135/203 (66.50%), Query Frame = 3
Query: 948 KMTVVLDMDECLLHSKFHGPGAATEAYRQCEERPDAVIELGVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDHIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGVLVASFYDDPADTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYRNAL 1556
++ +VLDMDECL+HSKF YRQ E RP+ + E ++SF + ++DG+ A VNKRPGLD FLE A+ Y+ VFTA + Y P+LD +DPKG LF +R SC+Q KG FLKDLSV + D+SR +LVDNNP+SF+ QP+NG+ V SFYDD D L S+ +++ + + DVRP L +FRL LL E++ +
Sbjct: 40 RIALVLDMDECLVHSKFQNE----VEYRQNEYRPEQLEEY-IDSFEIVMEDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDVLDPKGNLFAGHFFRESCKQRKGMFLKDLSV--IRDGDLSRVILVDNNPVSFLMQPSNGIPVPSFYDDTKDRTLESLSKVLASMQEVEDVRPRLHQLFRLADLLAEHQRVI 235
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Match: A0A7S2PH30_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PH30_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.690e-52 Identity = 99/201 (49.25%), Postives = 129/201 (64.18%), Query Frame = 3
Query: 951 MTVVLDMDECLLHSKFHGPGAATEAYRQCEERPDAVIELGVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDHIDPKGTLFHRRLYRSSC--RQVKGAFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGVLVASFYDDPADTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYR 1547
+ +VLDMDECL+HS+F + YRQ E RP A+ V SF + L DGD QVNKRPGLD FL+ + + T +FTAAM YA PVLD +DP+ T+ +R YR SC G ++KDLS + ++ D R VLVDNNPLSF+ QP+NG+LV++FYD P D L +V+ L+ L+ DVRP L DMF L L E +
Sbjct: 37 LVLVLDMDECLIHSQF----LSNTEYRQDEYRPSAISSKSVESFRIELPDGDLVQVNKRPGLDEFLQTVTSKFETHIFTAAMEVYASPVLDSLDPENTMLGKRFYRESCSLNSELGVYVKDLSKI-LQDVDHKRVVLVDNNPLSFLAQPSNGILVSNFYDSPDDITLKAVVDLLERLETKNDVRPTLDDMFGLSAALAELQ 232 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig687.14786.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig687.14786.1 >prot_H-paniculata_contig687.14786.1 ID=prot_H-paniculata_contig687.14786.1|Name=mRNA_H-paniculata_contig687.14786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=457bp MASAAVAMPVVREELFELKKTGASSSPSTAPPRDPPSKARVSGTKKGVKSback to top mRNA from alignment at H-paniculata_contig687:2051..9177- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig687.14786.1 ID=mRNA_H-paniculata_contig687.14786.1|Name=mRNA_H-paniculata_contig687.14786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7127bp|location=Sequence derived from alignment at H-paniculata_contig687:2051..9177- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig687:2051..9177- >mRNA_H-paniculata_contig687.14786.1 ID=mRNA_H-paniculata_contig687.14786.1|Name=mRNA_H-paniculata_contig687.14786.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2742bp|location=Sequence derived from alignment at H-paniculata_contig687:2051..9177- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |