prot_H-paniculata_contig6866.14785.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6866.14785.1
Unique Nameprot_H-paniculata_contig6866.14785.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length215
Homology
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BLAST of mRNA_H-paniculata_contig6866.14785.1 vs. uniprot
Match: D8LT64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT64_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 3.310e-57
Identity = 109/163 (66.87%), Postives = 131/163 (80.37%), Query Frame = 0 
Query:   39 RRWKCGVCSAKAGDLVCSGCVGQEAERRRQTRAHRLAALRVVRETAAAAVQERTNSIAREAELEREAAEEVRLREEIRKVTQRVAEERIQVASAAFSLKHQRDLLAAADFRLAQEQDSVVELEEALLRGLRRHAADAARVLRQRRWRKVVQIFVLLPIEPSLP 201
            R WKCGVC+AKAGDLVC  CV +EAERRR  RA RL AL  VRE A  A QER  ++  +A L++E A+E RL++ +R+V +RVAEERI+VASAAF+LKH RDLLAAA+  L++EQ S VE+ EALL GLRRHA DAAR LRQRRWRKVVQ+FVLLP+EPS+P
Sbjct:    6 RGWKCGVCNAKAGDLVCGACVTREAERRRAERAKRLGALESVREAATVAAQERGVAVQHDARLQKEEADECRLKDHVREVAKRVAEERIKVASAAFALKHHRDLLAAAESHLSREQASAVEMNEALLIGLRRHAEDAARTLRQRRWRKVVQLFVLLPVEPSMP 168
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6866.14785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT64_ECTSI3.310e-5766.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..128
IPR015411Replication factor Mcm10, C-terminalPFAMPF09332Mcm10coord: 16..125
e-value: 2.5E-4
score: 20.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6866contigH-paniculata_contig6866:6072..11359 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6866.14785.1mRNA_H-paniculata_contig6866.14785.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6866 6072..11379 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6866.14785.1 ID=prot_H-paniculata_contig6866.14785.1|Name=mRNA_H-paniculata_contig6866.14785.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=215bp
MVASTPAGPIGQAAGATAAATAATTAIHPQRARSGSTTRRWKCGVCSAKA
GDLVCSGCVGQEAERRRQTRAHRLAALRVVRETAAAAVQERTNSIAREAE
LEREAAEEVRLREEIRKVTQRVAEERIQVASAAFSLKHQRDLLAAADFRL
AQEQDSVVELEEALLRGLRRHAADAARVLRQRRWRKVVQIFVLLPIEPSL
PRESGGSGGGGGDAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015411Rep_factor_Mcm10_C