mRNA_H-paniculata_contig668.14567.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Match: A0A6H5KLX0_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX0_9PHAE) HSP 1 Score: 222 bits (566), Expect = 1.240e-67 Identity = 125/177 (70.62%), Postives = 139/177 (78.53%), Query Frame = 3
Query: 3 AFALL-GSASSFLVSLPTASRGGLSTATRSQHLTRPLPHRNGDARQLLRAQPGDGENLRPDVAQAMEEMEKEAKGTIEQLVGENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLSNQGVREAVKEYSNWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCKFV 530
AFALL GSASSF+++ TA S+ T S ++ LRA DGENL P+ A+ M+EM EAK IE+LV ENKVMLFMKGNKMFPQCGFSNSA+QVLRACDVEFETYDVL+N GVREAVKEYS+WPTIPQLY+DGEFTGGADIMIESFQSGELKKTLEDAGC FV
Sbjct: 11 AFALLAGSASSFVLTPKTAPSSLASSPTSSASCSKTS----------LRASM-DGENLLPNAAEIMDEMAGEAKDVIERLVKENKVMLFMKGNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEYSSWPTIPQLYVDGEFTGGADIMIESFQSGELKKTLEDAGCTFV 176
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Match: A0A835Z4Q0_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q0_9STRA) HSP 1 Score: 179 bits (454), Expect = 4.210e-51 Identity = 84/125 (67.20%), Postives = 104/125 (83.20%), Query Frame = 3
Query: 159 DGENLRPDVAQAMEEMEKEAKGTIEQLVGENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLSNQGVREAVKEYSNWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCKFVS 533
DG+NLRPDVA+ +E EA+ I+ +V ENKVMLFMKGNKMFPQCGFSN+A+QVLRA DV+FET+DVLS+ +R+ +KEYS WPTIPQLY+ GEF GG+DI+IE FQ+GELK TLE G +FV+
Sbjct: 43 DGQNLRPDVAEQLELYAAEAQKRIDSMVKENKVMLFMKGNKMFPQCGFSNTAVQVLRASDVKFETFDVLSDPDIRQGIKEYSQWPTIPQLYVGGEFVGGSDILIELFQNGELKTTLESGGAEFVA 167
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Match: D7G8D5_ECTSI (Grx_S14-glutaredoxin subgroup II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D5_ECTSI) HSP 1 Score: 172 bits (437), Expect = 1.940e-49 Identity = 80/86 (93.02%), Postives = 84/86 (97.67%), Query Frame = 3
Query: 273 GNKMFPQCGFSNSAIQVLRACDVEFETYDVLSNQGVREAVKEYSNWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCKFV 530
GNKMFPQCGFSNSA+QVLRACDVEFETYDVL+N GVREAVKE+S+WPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGC FV
Sbjct: 17 GNKMFPQCGFSNSAVQVLRACDVEFETYDVLTNPGVREAVKEFSSWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGCTFV 102
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Match: A0A6V1R5C5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R5C5_HETAK) HSP 1 Score: 157 bits (397), Expect = 8.840e-43 Identity = 70/116 (60.34%), Postives = 95/116 (81.90%), Query Frame = 3
Query: 165 ENLRPDVAQAMEEMEKEAKGTIEQLVGENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLSNQGVREAVKEYSNWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLED 512
+N +A ME+++ +AKG IE +V +NKVMLFMKG K+FPQCGFSN+A+Q+LR+ DVEF+T+DVLS+ +R+ +K++SNWPTIPQLY+D EF GG DIMIE F++GELKK E+
Sbjct: 45 DNADSSIAAEMEKIQAQAKGRIENMVNDNKVMLFMKGTKIFPQCGFSNTAVQILRSLDVEFQTFDVLSDPDIRQGIKDFSNWPTIPQLYVDKEFVGGCDIMIELFENGELKKMFEE 160
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Match: A0A4D9CRD6_9STRA (Glutaredoxin n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRD6_9STRA) HSP 1 Score: 150 bits (378), Expect = 1.310e-40 Identity = 66/94 (70.21%), Postives = 83/94 (88.30%), Query Frame = 3
Query: 225 TIEQLVGENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLSNQGVREAVKEYSNWPTIPQLYIDGEFTGGADIMIESFQSGELKKTL 506
TI+ LVG NKVMLFMKG+K+FPQCGFSN+A+ +LRACD EFET+DVLS+ VRE +K YS+WPTIPQ Y++GEF GG+DI++E F+SGEL+KTL
Sbjct: 16 TIKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTL 109
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Match: A0A7S4C1K1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1K1_CHRCT) HSP 1 Score: 150 bits (378), Expect = 3.220e-40 Identity = 69/98 (70.41%), Postives = 84/98 (85.71%), Query Frame = 3
Query: 216 AKGTIEQLVGENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLSNQGVREAVKEYSNWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLE 509
A+ I+++V NKVMLFMKGNKMFPQCGFSN+A+Q+L A DV +ET+DVLS+Q +RE VKEYSNWPTIPQ YI+GEF GG DIMIE +QSGEL++ LE
Sbjct: 41 AEERIKEMVESNKVMLFMKGNKMFPQCGFSNTAVQILNAVDVPYETFDVLSDQDIREGVKEYSNWPTIPQCYIEGEFIGGCDIMIEMYQSGELQEMLE 138
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Match: A0A7S0EUU3_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EUU3_9EUKA) HSP 1 Score: 147 bits (372), Expect = 2.150e-39 Identity = 64/98 (65.31%), Postives = 82/98 (83.67%), Query Frame = 3
Query: 228 IEQLVGENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLSNQGVREAVKEYSNWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGC 521
IE+L+GE+KVMLFMKGNKMFPQCGFSN+ +Q+L AC+ FET+DVL +Q VRE +K +S+WPTIPQ+Y++GEF GG D+MIE +QSGEL + LE A
Sbjct: 41 IEELIGEHKVMLFMKGNKMFPQCGFSNTVVQILNACETPFETFDVLGDQRVREDIKRFSSWPTIPQVYVEGEFLGGCDVMIEMYQSGELAEILEKANA 138
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Match: W7TU87_9STRA (Glutaredoxin-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TU87_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.510e-39 Identity = 65/93 (69.89%), Postives = 82/93 (88.17%), Query Frame = 3
Query: 228 IEQLVGENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLSNQGVREAVKEYSNWPTIPQLYIDGEFTGGADIMIESFQSGELKKTL 506
I+ LVG NKVMLFMKG+K+FPQCGFSN+A+ +LRACD EFET+DVLS+ VRE +K YS+WPTIPQ Y++GEF GG+DI++E F+SGEL+KTL
Sbjct: 58 IKSLVGNNKVMLFMKGSKLFPQCGFSNTAVSILRACDAEFETFDVLSDYLVREEIKNYSSWPTIPQCYVNGEFVGGSDILLEMFESGELEKTL 150
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Match: A0A2T7BY74_9POAL (Glutaredoxin domain-containing protein n=7 Tax=Panicum TaxID=4539 RepID=A0A2T7BY74_9POAL) HSP 1 Score: 144 bits (363), Expect = 1.180e-37 Identity = 63/103 (61.17%), Postives = 86/103 (83.50%), Query Frame = 3
Query: 213 EAKGTIEQLVGENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLSNQGVREAVKEYSNWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGC 521
E + T++++VG NKV+LFMKG K FPQCGFS++ +Q+LR+ DV FET DVL+N+ +R+ +KEYS+WPT PQLYIDGEF GG DI +E+++SGEL++TLE A C
Sbjct: 68 EMRATLDKVVGSNKVVLFMKGTKDFPQCGFSHTVVQILRSLDVPFETLDVLANEALRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELQETLEKAMC 170
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Match: A0A7S0NUZ2_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NUZ2_9EUKA) HSP 1 Score: 143 bits (360), Expect = 1.380e-37 Identity = 62/102 (60.78%), Postives = 83/102 (81.37%), Query Frame = 3
Query: 216 AKGTIEQLVGENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEFETYDVLSNQGVREAVKEYSNWPTIPQLYIDGEFTGGADIMIESFQSGELKKTLEDAGC 521
A+ I+++V ++KVMLFMKGNKMFPQCGFSN+A+Q+L AC+ FET+DVLS+ +RE VK +S WPTIPQ Y+DGEF GG D+MIE +Q+GEL++ +E A
Sbjct: 41 AQERIKEMVAQHKVMLFMKGNKMFPQCGFSNTAVQILNACETPFETFDVLSDNEIREGVKTFSKWPTIPQCYVDGEFIGGCDVMIEMYQNGELQEMVEKANA 142 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig668.14567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig668.14567.1 >prot_H-paniculata_contig668.14567.1 ID=prot_H-paniculata_contig668.14567.1|Name=mRNA_H-paniculata_contig668.14567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp MEEMEKEAKGTIEQLVGENKVMLFMKGNKMFPQCGFSNSAIQVLRACDVEback to top mRNA from alignment at H-paniculata_contig668:27497..32363+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig668.14567.1 ID=mRNA_H-paniculata_contig668.14567.1|Name=mRNA_H-paniculata_contig668.14567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4867bp|location=Sequence derived from alignment at H-paniculata_contig668:27497..32363+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig668:27497..32363+ >mRNA_H-paniculata_contig668.14567.1 ID=mRNA_H-paniculata_contig668.14567.1|Name=mRNA_H-paniculata_contig668.14567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=696bp|location=Sequence derived from alignment at H-paniculata_contig668:27497..32363+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |