prot_H-paniculata_contig668.14564.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig668.14564.1
Unique Nameprot_H-paniculata_contig668.14564.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length228
Homology
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BLAST of mRNA_H-paniculata_contig668.14564.1 vs. uniprot
Match: A0A6H5K9W1_9PHAE (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W1_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 5.010e-11
Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0 
Query:    6 EEDEALLRRVTGQADLYNRLLASLGLKQP-VGSAPGSHAA-WEARIRRSTVSLKALGKALGGVGLPLGKARVAAVAKLAC 83
            E DE  LRRV  QADLY R+LASLGLKQP VGS+ G+  A W+A +R S+V L+A  K L  VGL L + R  A+A  AC
Sbjct:  826 EADETALRRVAHQADLYGRVLASLGLKQPAVGSSQGTALADWKASLRVSSVPLEAFRKGLAEVGLHLSRTRAIALATRAC 905
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BLAST of mRNA_H-paniculata_contig668.14564.1 vs. uniprot
Match: D7G8D4_ECTSI (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D4_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 2.150e-8
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0 
Query:    8 DEALLRRVTGQADLYNRLLASLGLKQPV-GSAPGSHAA-WEARIRRSTVSLKALGKALGGVGLPLGKARVAAVAKLA 82
            DE  LRR+  QADL++R+LASLGLKQPV GS+ GS  A  EA +R STV L+A  K L  VGL L + R  A+A  A
Sbjct:  811 DETALRRIVQQADLFDRVLASLGLKQPVVGSSQGSTLADREASLRVSTVPLEAFRKGLAEVGLHLSRTRAIALATRA 887
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig668.14564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9W1_9PHAE5.010e-1156.25C-CAP/cofactor C-like domain-containing protein n=... [more]
D7G8D4_ECTSI2.150e-855.84C-CAP/cofactor C-like domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig668contigH-paniculata_contig668:10583..14226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig668.14564.1mRNA_H-paniculata_contig668.14564.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig668 10582..14226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig668.14564.1 ID=prot_H-paniculata_contig668.14564.1|Name=mRNA_H-paniculata_contig668.14564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
AQQGVEEDEALLRRVTGQADLYNRLLASLGLKQPVGSAPGSHAAWEARIR
RSTVSLKALGKALGGVGLPLGKARVAAVAKLACNGKLIPPPPCRTQRRLL
RRPAAVLPPAAAAAAAASTTTTTPRNRGNNNSGHRNNNNGDEDESNRKNI
YRKVTTNGHLYPNKNNQANDIDISTIKGIDDGDRRRVSSWDLRTYLLKLR
VEPKSREARDQRRRRFFAGGGGGGQGYS
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