prot_H-paniculata_contig6675.14560.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6675.14560.1
Unique Nameprot_H-paniculata_contig6675.14560.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length420
Homology
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Match: D8LEJ1_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ1_ECTSI)

HSP 1 Score: 168 bits (425), Expect = 2.590e-45
Identity = 81/129 (62.79%), Postives = 97/129 (75.19%), Query Frame = 0
Query:  235 IDAECIRSDPSPSFYGVTVHFPFETPMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAALAWQRHQLVKTGKAPQIIYGARVHTQLAQISAELKKVPYKATAITLGSRARLCINPLIVGETRA 363
            +DA     DP  ++YG+ V FPFETPM PQ  +MQR+IAA K K+HAL ESPTGTGKS A+LCA+LAWQR +L +TGKAPQI YGAR HTQL Q+   +K  PY  T  TLGSRARLCINP++VG+  A
Sbjct:    1 MDASRQLGDPPKNYYGIKVEFPFETPMVPQDQMMQRIIAALKSKRHALLESPTGTGKSAAMLCASLAWQRDELFRTGKAPQIFYGARTHTQLEQMVRVVKSSPYCPTMATLGSRARLCINPMVVGDGAA 129          
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Match: A0A812QM34_SYMPI (Rtel1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812QM34_SYMPI)

HSP 1 Score: 119 bits (299), Expect = 2.350e-25
Identity = 57/108 (52.78%), Postives = 76/108 (70.37%), Query Frame = 0
Query:  247 SFYGVTVHFPFETPMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAALAWQRHQLVKTGKAPQIIYGARVHTQLAQISAELKKVPYKATAITLGSR-ARLCI 353
            +F G+ V FPFE P++PQR ++Q ++ A    KHA+ ESPTGTGK+ A+LCA LAWQRH++ KTG APQ++Y  R H Q+ Q   EL++ PY+     LGSR A LCI
Sbjct:  243 NFGGIEVLFPFEQPLEPQRAVIQNVLEALVLGKHAVLESPTGTGKTAAVLCACLAWQRHRMSKTGSAPQLMYATRTHAQVRQAIRELRRTPYRPITAVLGSRGAGLCI 350          
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Match: A0A1Q9DHK7_SYMMI (Regulator of telomere elongation helicase 1-like n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DHK7_SYMMI)

HSP 1 Score: 118 bits (295), Expect = 7.320e-25
Identity = 67/154 (43.51%), Postives = 90/154 (58.44%), Query Frame = 0
Query:  201 DVAMGAGSGXXXXXXXXXXXXGGGYGPCLSAPCDIDAECIRSDPSPSFYGVTVHFPFETPMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAALAWQRHQLVKTGKAPQIIYGARVHTQLAQISAELKKVPYKATAITLGSR-ARLCI 353
            D+A+G G+G              G G     PC I     R     +F GV V FPFE P++PQR +++ ++ A    KHA+ ESPTGTGK+ A+LCA +AWQRH++ KTG APQ+++  R H Q+ Q   ELK+ PY+     LGSR A LCI
Sbjct:   99 DLALGTGAGSIS-----------GPGMISGEPCPIVQAHARF--KLNFGGVEVLFPFEQPLEPQRAVIRSVLEALTLGKHAVLESPTGTGKTAAVLCACIAWQRHRMRKTGSAPQVMFATRTHAQVRQAIRELKRTPYRPIMAVLGSREAGLCI 239          
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Match: A0A812ZFR4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812ZFR4_9DINO)

HSP 1 Score: 118 bits (295), Expect = 7.590e-25
Identity = 67/154 (43.51%), Postives = 90/154 (58.44%), Query Frame = 0
Query:  201 DVAMGAGSGXXXXXXXXXXXXGGGYGPCLSAPCDIDAECIRSDPSPSFYGVTVHFPFETPMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAALAWQRHQLVKTGKAPQIIYGARVHTQLAQISAELKKVPYKATAITLGSR-ARLCI 353
            D+A+G G+G              G G     PC I     R     +F GV V FPFE P++PQR +++ ++ A    KHA+ ESPTGTGK+ A+LCA +AWQRH++ KTG APQ+++  R H Q+ Q   ELK+ PY+     LGSR A LCI
Sbjct:  100 DLAIGTGAGSIS-----------GPGMISGEPCPIVQAHARF--KLNFGGVEVLFPFEQPLEPQRAVIRNVLEALTLGKHAVLESPTGTGKTAAVLCACIAWQRHRMRKTGSAPQVMFATRTHAQVRQAIRELKRTPYRPIMAVLGSREAGLCI 240          
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Match: A0A7S2PA46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PA46_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.600e-23
Identity = 55/122 (45.08%), Postives = 75/122 (61.48%), Query Frame = 0
Query:  250 GVTVHFPFETPMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAALAWQRHQLVKTGKAPQ---IIYGARVHTQLAQISAELKKVPYKATAITLGSRARLCINPLIVGETRASRKGE 368
            G+ + +P+ T M PQR +   +I A    KH + ESPTGTGKS A+LC+ LAWQRH   K+G+  +   IIY +R H+Q+AQ+   LK+ PY+     LGSR RLCI+  I  + R    GE
Sbjct:   64 GIKIGWPYPTVMSPQRQMAFHLIKALNSSKHVVLESPTGTGKSAAILCSVLAWQRHHWKKSGEKKEKVKIIYCSRTHSQVAQMVTSLKQTPYRPRMAILGSRERLCIHKSI--KPRGGGSGE 183          
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Match: A0A812U899_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812U899_9DINO)

HSP 1 Score: 112 bits (281), Expect = 4.650e-23
Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 0
Query:  250 GVTVHFPFET-PMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAALAWQRHQLVKTGKAPQIIYGARVHTQLAQISAELKKVPYKATAITLGSR-ARLCIN 354
            GV V FPFE  P++PQ  +++ ++ A    KHA+ ESPTGTGK+ A+LCA +AWQRH+++KTG APQ++Y  R H Q+ Q   ELK+ PY+     LGSR A LCIN
Sbjct:  123 GVEVLFPFEKGPLEPQHAVIRNVLEALVLGKHAVLESPTGTGKTAAVLCACIAWQRHRMMKTGCAPQLMYATRTHAQVRQAVRELKRTPYRPIMAVLGSREAGLCIN 229          
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Match: A0A0H5RA64_9EUKA (DNA helicase n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RA64_9EUKA)

HSP 1 Score: 111 bits (278), Expect = 9.890e-23
Identity = 56/110 (50.91%), Postives = 75/110 (68.18%), Query Frame = 0
Query:  250 GVTVHFPFETPMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAALAWQ-----RHQLVKTGKAPQIIYGARVHTQLAQISAELKKVPYKATAITLGSRARLCIN 354
            G+ VHFP E P   Q  ++++MI +FK KKHA+ ESPTGTGKS+ALLC A+A+Q     RHQ       P+I+  +R H+QL+ ++ ELKK+PY   A TLGSR  LC+N
Sbjct:   94 GIEVHFPLEKPFPTQIAIIEKMIESFKQKKHAIIESPTGTGKSLALLCGAVAFQCDSYRRHQDDPDVAIPRIVVASRTHSQLSAMATELKKLPYSTWATTLGSRRVLCLN 203          
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Match: A0A7S4SS98_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SS98_9DINO)

HSP 1 Score: 108 bits (270), Expect = 1.300e-22
Identity = 56/110 (50.91%), Postives = 70/110 (63.64%), Query Frame = 0
Query:  256 PFETPMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAALAWQRHQLVKTGKAPQIIYGARVHTQLAQISAELKKVPYKATAITLGSRARLCINPLIVGETRASR 365
            PFE  + PQ  +M+R + A + ++ AL ESPTGTGKSVALL A LAWQR      G APQI+YG R H QLAQ+ AEL+K PY+     +GSR  LC+N  +    R  R
Sbjct:   84 PFEL-LPPQLAVMERSLRACERRQVALLESPTGTGKSVALLTATLAWQRRTFAAQGAAPQILYGVRTHAQLAQMVAELQKTPYRPRMAVIGSREHLCVNEAVRAAARRQR 192          
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Match: A0A813DPK9_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DPK9_POLGL)

HSP 1 Score: 110 bits (276), Expect = 2.110e-22
Identity = 57/111 (51.35%), Postives = 71/111 (63.96%), Query Frame = 0
Query:  252 TVHFPFETPMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAALAWQRHQLVKTGKAPQIIYGARVHTQLAQISAELKKVPYKATAITLGSRARLCINPLIVGETR 362
            T+ FPF  PM PQ  L +R + A +    AL +SPTGTGKSVALLCAALAWQR    + G APQI+YG R H QL+Q+  EL+K PY+     +GSR  +CIN  +    R
Sbjct:  166 TLQFPFP-PMHPQVALAERAVHACETGGIALLQSPTGTGKSVALLCAALAWQRRCFAERGAAPQILYGVRTHAQLSQVVGELRKTPYRPRMAVIGSRDSMCINEDVKANAR 275          
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Match: A0A813DB55_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DB55_POLGL)

HSP 1 Score: 110 bits (276), Expect = 2.260e-22
Identity = 57/111 (51.35%), Postives = 71/111 (63.96%), Query Frame = 0
Query:  252 TVHFPFETPMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAALAWQRHQLVKTGKAPQIIYGARVHTQLAQISAELKKVPYKATAITLGSRARLCINPLIVGETR 362
            T+ FPF  PM PQ  L +R + A +    AL +SPTGTGKSVALLCAALAWQR    + G APQI+YG R H QL+Q+  EL+K PY+     +GSR  +CIN  +    R
Sbjct:  479 TLQFPFP-PMHPQVALAERAVHACETGGIALLQSPTGTGKSVALLCAALAWQRRCFAERGAAPQILYGVRTHAQLSQVVGELRKTPYRPRMAVIGSRDSMCINEDVKANAR 588          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6675.14560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ1_ECTSI2.590e-4562.79Helicase ATP-binding domain-containing protein n=1... [more]
A0A812QM34_SYMPI2.350e-2552.78Rtel1 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]
A0A1Q9DHK7_SYMMI7.320e-2543.51Regulator of telomere elongation helicase 1-like n... [more]
A0A812ZFR4_9DINO7.590e-2543.51Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A7S2PA46_9STRA2.600e-2345.08Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A812U899_9DINO4.650e-2352.34Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A0H5RA64_9EUKA9.890e-2350.91DNA helicase n=1 Tax=Spongospora subterranea TaxID... [more]
A0A7S4SS98_9DINO1.300e-2250.91Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A813DPK9_POLGL2.110e-2251.35Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A813DB55_POLGL2.260e-2251.35Hypothetical protein n=1 Tax=Polarella glacialis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010614DEAD2PFAMPF06733DEAD_2coord: 318..362
e-value: 1.1E-5
score: 25.1
NoneNo IPR availableGENE3D3.40.50.300coord: 261..395
e-value: 1.6E-24
score: 88.5
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 250..365
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 250..419
score: 13.095
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 252..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6675contigH-paniculata_contig6675:1634..11221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6675.14560.1mRNA_H-paniculata_contig6675.14560.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6675 1634..11221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6675.14560.1 ID=prot_H-paniculata_contig6675.14560.1|Name=mRNA_H-paniculata_contig6675.14560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=420bp
NAQNSRDSQQQQQRVVTMHTASQASPLNIANVRPDSAGAGVVKCGSNQAA
SISPPPEIRSPVPVEGASVGEAAHRGASSAVDGLMAPREEQRSSVAGGAG
TEGHVGVFATLSSSDFAPSPLFSNAQPAVAQPSPKGFSMKGAATAPWERH
TRGFGTRILRRMGFDGRTGARETEFVNTFADKARAGQVTRGGERGGIGRI
DVAMGAGSGGGGSGGGGGGRRGGGYGPCLSAPCDIDAECIRSDPSPSFYG
VTVHFPFETPMQPQRMLMQRMIAAFKDKKHALCESPTGTGKSVALLCAAL
AWQRHQLVKTGKAPQIIYGARVHTQLAQISAELKKVPYKATAITLGSRAR
LCINPLIVGETRASRKGEMDDDDEDDNLVVDGGLGGESTTEYRSGGAAAG
RHARSGGVMGSRRRPRYKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010614DEAD_2
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3
IPR027417P-loop_NTPase