mRNA_H-paniculata_contig6672.14557.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Match: D7G4R1_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R1_ECTSI) HSP 1 Score: 236 bits (602), Expect = 1.950e-63 Identity = 225/627 (35.89%), Postives = 286/627 (45.61%), Query Frame = 3
Query: 468 GKAKEVRGLQNVGNTCFINVVLQSLASISPFVRYLQVQVDAPPAS----------IYQRP-----FTSELLQMMTDLRPA---HPPLGTLNPRKLRGLLAQKVERFKGFDQQDAQELFQMVVRLVNEEA------ETRPGTAAGSDIGPRLKG--LKLLAEPQQESKDTKLNYQPSAKDAPRQMRSPLNPLCGSLASVTCCKECGKKSIRVEPFVDLSLTLPEAKGISGEYLGGGFRAAGMGGINTSPVGLEHILQDFTDEQFVEGVECLTYKYNCVKFNS--AHTGYQGEMMWYTISVWRKCPNRAVIGIHCTRRAYKRMLLARPPETLCLHFPRRHPNPHGLMVKLKQLVKFPLKLDVAPFCCTRGYCTEGIAA---------------RQNQGAAASTTTANAAYDDAPRVPTTGRVSCPVTESSLSGSPAVKVPPVAARASRSSPQSVNGLKHAALPGGSLESTESGATADVATAEGGRKHMNGSDGRDSSLR-GSNGNGSRISVTGGLRGEK-------------RVEYDLRAVIVHHGGAEGGHYTAFRNLATSADGIGSTSDGGGGMIGITQSRLGLRRP----QDDVWVSLSDETVKTVSVSEVLKSQAYMLFYGRNGR 2165
G+ V G++N+GNTCF+N VLQSLAS F YL+ + + +P FT ELLQ+M DL P KLR LL +V+ F DQQDAQELFQMV+RLV EEA + T+ S G R+ G L+ +E L P NPL GSL + C+ C +KS R+E FVDLSLTLPEA+ AG G + + PV L+ IL+DFT EQ VE VEC C ++ AH + V+ RA RMLLA PP+TLCLHFPRRH +P G +KLKQ V FP L+VA FC G T+ I + QG A TT +A +PT P P K SPQS+ G K A L GGS + + + RK +NG LR GS G+G SV+G + G + +EYDLRAVIVH G A+ GHYTAFR + S G + G ++++ G R+ + WV +SDE V+ VS VL SQAYMLFY + R
Sbjct: 54 GEQLAVTGIKNLGNTCFLNAVLQSLASFHVFREYLEELYNCNQREXXXXXXSDKVLSTKPLENTVFTCELLQLMKDLEPQVXXXXXXXXXXXXKLRKLLRDRVDTFGKEDQQDAQELFQMVMRLVGEEAALCIKNRSTSSTSRTSAPGIRITGGFADLMDTASKEGVLKNL---------------PENPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEARNP---------HVAGPG-VPSPPVNLDKILEDFTREQLVEDVECP----KCAMRSAMEAHETHDEXXXXXXXXXXXXXXXEEVVVPLQRVRADMRMLLATPPKTLCLHFPRRHQSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQMKSMLANSLPQLPQGHAVKTTPGSAGLPPEALLPT------PXXXXXXXXXPQAKA--------LQSPQSLPGYKQA-LVGGSAQEASTAYS---------RKELNG-------LRSGSGGSGGGSSVSGSVEGGRDSNDVGSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKV-DSDKGEPVEEEVPAGSERVSEAPRGERKGGGGGANKEWVYISDEEVERVSEKRVLSSQAYMLFYRQGSR 619
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Match: A0A6H5KL23_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL23_9PHAE) HSP 1 Score: 236 bits (602), Expect = 2.160e-63 Identity = 230/633 (36.33%), Postives = 295/633 (46.60%), Query Frame = 3
Query: 468 GKAKEVRGLQNVGNTCFINVVLQSLASISPFVRYLQV-------------QVD-----APPA----SIYQRPFTSELLQMMTDLRPAHPPLGTLNP---RKLRGLLAQKVERFKGFDQQDAQELFQMVVRLVNEEA----ETRPGTAAGSDIGPRLKGLKLLAEPQQESKDTKLNYQPSAKDAPRQMRSPLNPLCGSLASVTCCKECGKKSIRVEPFVDLSLTLPEAKGISGEYLGGGFRAAGMGGINTSPVGLEHILQDFTDEQFVEGVEC----LTYKYNCVKFNSAHTGYQGEMMWYTISVWRKCPNRAVIGIHCTRRAYKRMLLARPPETLCLHFPRRHPNPHGLMVKLKQLVKFPLKLDVAPFCCTRGYCTEGIAA---------------RQNQGAAASTTTANAAYDDAPRVPTTGRVSCPVTESSLSGSPAVKVPPVAARASRSSPQSVNGLKHAALPGGSLESTESGATADVATAEGGRKHMNGSDGRDSSLR-GSNGNGSRISVTGGLRGEK-------------RVEYDLRAVIVHHGGAEGGHYTAFRNLATSADGIGSTSDGGGGMIGITQSRLGLRRPQDDV----WVSLSDETVKTVSVSEVLKSQAYMLFYGRNGRR 2168
G+ V G++N+GNTCF+N VLQSLAS F YL+ Q D A P + FT ELLQ+M +L P PP + P KLR LL +++ F DQQDAQELFQMV+RLV EEA + R ++ P ++ A+ DT ++K+ P NPL GSL + C+ C +KS R+E FVDLSLTLPEA+ + +G G + + PV LE IL+DFT EQ VE VEC + + + + P + V RA RMLLA PP+TLCLHFPRRH +P G +KLKQ V FP L+VA FC G T+ I + QG A TT A +PT P S S P K SPQ + G K A L GGS + A +A + RK +NG LR GS G+G SV+G + G + +EYDLRAVIVH G A+ GHYTAFR + S G + G ++++ G R+ WV +SDE V+ VS VL SQAYMLFY R G R
Sbjct: 58 GEQLAVPGIKNLGNTCFLNAVLQSLASFHVFREYLEDLHTYMREREHQEHQADKFVFGAEPVLSTKPLESTVFTCELLQLMKNLEPQVPPASPVTPIIPTKLRTLLRDRIDTFGREDQQDAQELFQMVMRLVGEEAALCLKKRSTSSTSRTTAPGIRITGGFAD----LMDT------ASKNLPE------NPLLGSLMYLRHCRGCQQKSGRLERFVDLSLTLPEAR--NPHVVGPG--------VPSPPVNLEKILEDFTREQLVEDVECPKCAMRSAMEARETHDEESXXXXXXXXXXXXXXXXVPPQRV-------RADMRMLLATPPKTLCLHFPRRHRSPSGSEMKLKQRVIFPAHLNVARFCYAGGCHTDSIGVPTAFQTKSMLANSLTQLPQGHAVKTTPGAAGLPPEALLPT------PRPPPSASSPPQAKA--------LQSPQPLPGYKQA-LVGGSAQE------ASIAYS---RKELNG-------LRSGSGGSGGGSSVSGSVEGGRDSNDVGSVSGNDGAMEYDLRAVIVHRGSADSGHYTAFRKV-DSDKGKPVEEEVPAGPEPVSEAPRGERKVGGGCAKKEWVYISDEEVERVSEKRVLSSQAYMLFY-RQGLR 624
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Match: A0A835Z8G7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G7_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.610e-25 Identity = 122/335 (36.42%), Postives = 160/335 (47.76%), Query Frame = 3
Query: 483 VRGLQNVGNTCFINVVLQSLASISPFVRYLQ-VQVDAPPASIYQRPFTSELLQMMTDLR--PAHPPLGTLN-PRKLRGLLAQKVERFKGFDQQDAQELFQMVVRLVNEEA---ETRPGTAAGSDIGPRLKGLKLLAEPQQESKDTKLNYQPSAKDAPRQMRSPLNPLCGSLASVTCCKECG-KKSIRVEPFVDLSLTLPEAKGISGEYLGGGFRAAGMGGINTSPVGLEHILQDFTDEQFVEGVECLTYKYNCVKFNSAHTGYQGEMMWYTISVWRKCPNRAVIGIHCTRRAY-KRMLLARPPETLCLHFPRRHPNP-HGLMVKLKQLVKFPLKL 1457
V GL N+GNTCF+N VLQSLAS+ FV YL+ ++ AS + F+ LLQ ++ L A P T R++ L +K F+G DQQDAQE F +V LV+EE + R G+A + R L++ P S + +P+A P L P+ G+L S C C K + V PF+D+SL LPEA L GG +A N G L+ F E+ VEGVEC C Q + R G R + KR+ LAR P LCLHF RRH +P MVKL Q V+FPL+L
Sbjct: 7 VVGLPNLGNTCFLNSVLQSLASLRHFVSYLEGMRPTVGHAS--RASFSRTLLQCLSQLAGGAAAAPSSTYPIAREVYEGLLRKAPTFQGRDQQDAQEAFHALVDLVDEERIQLKNRLGSAYVVPLRSRRDFLRIHPAPPFASGGLEALLRPAAAVLPASFFGAL-PMQGTLCSSLRCVVCNTSKPLTVAPFIDISLPLPEAY-----QLYGGGASAHHASSNGFANGNGACLRAFMQEEEVEGVECDA----CTHRRRRERRIQERL-------------RRGDGEGPELRTFVKRLSLARLPRVLCLHFCRRHYSPSRERMVKLSQRVRFPLEL 316
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Match: A0A7S2S4P2_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4P2_9STRA) HSP 1 Score: 109 bits (272), Expect = 6.830e-21 Identity = 164/629 (26.07%), Postives = 240/629 (38.16%), Query Frame = 3
Query: 489 GLQNVGNTCFINVVLQSLASISPFVRYLQVQVDAPPASIYQRPFTSELLQMMTDLRPAHPPLG-TLNPRKLRGLLAQKVERFKGFDQQDAQELFQMVVRLVNEEAET-------------------------------------------------RPGTAAGSDI----------GPRLKGLKLLAEPQQESKDTKLNYQPSAKDAPRQMRSPLNPLCGSLASVTCCKECGK-KSIRVEPFVDLSLTLPEAKGISGEYLGGGFRAAGMGGINTSPVGLEHILQDFTDEQFVEGVECLTYKYNCVKFNSAHTGYQGEMMWYTISVWRKCPNRAV---IGIHCTRRAY---KRMLLARPPETLCLHFPR--RHPNPHGLMVKLKQLVKFPLKLDVAPFCCTR--GYCTEGIAARQNQGAAASTTTANAAYDDAPRVPTTGRVSCPVTESSLSGSPAVKVPPVAARASRSSPQSVNGLKHAALPGGSLESTESGATADVATAEGGRKHMNGSDGRDSSLRGSNGNGSRISVTGGLRGEKRVEYDLRAVIVHHGGAEGGHYTAFRNLATSADGIGSTSDGGGGMIGITQSRLGLRRPQDDVWVSLSDETVKTVSVSEVLKSQAYMLFYGRNG 2162
GL+N+GNTCF+N VLQSLAS PFVRYL+ + PF LL + LR A G ++P L L+ +F+G DQQDA+E+ Q +V V++E PGT +G D+ G G K P + + P++ + P +PL G L + C CG+ ++I PF+D+ L+LPE+ L G AA PV LE L FT + ++GV+C + C Q M + S+ P A + TRR + +++ L +T+ H PR R + + +L ++ F L V R C + + D P G V +++L+ S V P A R++ + ++ + ++ P S D+ + G SSL V+ G Y L AVI HHGG + GHY+A+R L ++ P D WV +SDETV+ VSV +VL SQAYMLFY R G
Sbjct: 77 GLRNLGNTCFLNSVLQSLASAVPFVRYLEGMRPEQTMA----PFAFALLGCIHALRGAPSHAGRVVDPSNLVRLIMASFSQFEGQDQQDAEEVLQALVLAVSKERSELDSPAALMPLSLQALISATPSSSRSEAPAQAAPGPGTGIPGLPWRVRAPAPGTCSGEDVSRNSCQSGRTGGHGVGRKRNLAPSASAPRIGVVPPPASLPLRHGLAQPSSPLTGWLGTRLQCCHCGEVRAIHNAPFIDVPLSLPES-------LAPGSAAA------LQPVRLEDCLSQFTSPESIDGVDCSSCSLKC-----RLDELQSSMRFLVDSLSDATPTAAAELHSELEQTRREWNELRQLRLRAEVDTMGWHLPRVQRRASKQFVFSRLPSVLCFHLPRRVYDMHTQRMAKLCQRVLFPCR--------------LDMRPFTAYGGAAGHRVAQNALTDS---HVGPFAIRSAVGAGRAPD---ESSEPSSECSSRSDTPDLDLLS------------GHSSSL-----------VSSGFI------YQLCAVIQHHGGPDLGHYSAYRRLGSA--------------------------PMDQ-WVHISDETVRPVSVEQVLSSQAYMLFYTRGG 607
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Match: K3WEF4_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEF4_GLOUD) HSP 1 Score: 106 bits (264), Expect = 3.210e-20 Identity = 105/367 (28.61%), Postives = 163/367 (44.41%), Query Frame = 3
Query: 483 VRGLQNVGNTCFINVVLQSLASISPFVRYLQ--VQVDAPPASIYQRPFTSELLQMMTDLRPA--HPPLGTLNPRKLRGLLAQKVERFKGFDQQDAQELFQMVVRLVNEEAETRPGTAAGSDIGPRLKGLKLLAEPQQESKD-TKLNYQPSAKDAPRQMRSPLNPLCGSLASVTCCKECGK-KSIRVEPFVDLSLTLPEAKGISGEYLGGGFRAAGMGGINTSPVGLEHILQDFTDEQFVEGVECL----------------TYKYNCVKFNSAHTGYQGEMMWYTISVWRKCPNRA-----VIGI-----HCTR---RAYKRMLLARPPETLCLHFPRR-HPNPHGLMVKLKQLVKFPLKLDVAPFC 1475
V G+QN+GNTCF N +LQ+LAS+S F YL V+ A A + PFT+ L + +L P H P + PR+L L K+ F+G QQD+QEL Q ++ LV+EE + A D G L+ L E SK + + + S K+ NPL G ++ C +C + + + PF+D+SL+ +G PV L L+ +T+ + ++GVEC + + ++ + E+ + W +A VI + H R +KR+ +R P+ C HF R+ + G KL V FPL+LD++ FC
Sbjct: 23 VPGIQNLGNTCFFNAILQALASVSSFQEYLDEVVRQSALKAHVRHIPFTNALHDCIEELAPTMEHEPRPAVAPRRLNAELVYKLAAFRGNKQQDSQELLQFLMNLVSEEQKR----CAVRDNG--LRDLTSRDEAAFMSKSISDVRHDESVKN-----NKYWNPLHGLQVNLLQCTKCKRYRPMNNHPFLDVSLSFKSDQG-------------------KKPVTLTDCLRMYTEPEAIQGVECSYCSVLQELRVTRQAFEATQRQIAREKASFDDVELEIAQHERKEWIHTLEKALTSSQVIDLEDFDQHIPRVLQDCHKRLQFSRSPDVFCFHFNRKVYLAWSGSARKLDTHVNFPLELDMSAFC 359
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Match: A0A167KNM6_PHYB8 (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167KNM6_PHYB8) HSP 1 Score: 105 bits (263), Expect = 7.580e-20 Identity = 163/689 (23.66%), Postives = 267/689 (38.75%), Query Frame = 3
Query: 300 ARSMSQNRAAVCGVGAIVLVGVGFAVYNGEKEASLFARAMYQGSSCGRYRIKRSGEGKAKEVRGLQNVGNTCFINVVLQSLASISPFVRYLQVQVDAPPASIYQRPFT-------SELLQMMTDLRPAHPPLG---TLNPRKLRGLLAQKVERFKGFDQQDAQELFQMVVRLVNEEAETRPGTAAGSDIGPRLKGLKLLAEPQQESKDTKLNYQPSAKDA---------------------PRQMRSPLNPLCGSLASVTCCKECGKKS-IRVEPFVDLSLTLPEAKGISGEYLGGGFRAAGMGGINTSPVGLEHILQDFTDEQFVEGVECLTYKYNCVKFNSAHT-GYQGEMMWYTISVWRKCPNRAV---IGIHCTRRAY-----------------------KRMLLARPPETLCLHFPRRHPNPHGLMVKLKQLVKFPLKLDVAPFCCTRGYCTEGIAARQNQGAAASTTTANAAYDDAPRVPTTGRVSCPVTESSLSGSPAVKVPPVAARASRSSPQSVNGLKHAALPGGSLESTESGATADVATAEGGRKHMNGSDGRDSSLRGSNGNGSRI------SVTGGLRGEKRVEYDLRAVIVHHGGAEGGHYTAFRN--LATSADGIGSTSDGGGGMIGITQSRLGLR--RPQDDVWVSLSDETVKTVSVSEVLKSQAYMLFYGRN 2159
A S + + +A+ V +I L G+A+ ++ R R K E K ++GL N GN+CF+N VLQ+LA+++ YL +VD P P T S + T + + PL + P + L +K + DQQDA ELFQ++ + E E + A S P ++ E + + + N++ S+ + PR R P NP G AS C +C + IR F ++SLT+P+ TS LE+ L +T + +C CV ++A + ++ + P R + IH + A K+ + A PP+ LCLH R +P G + K VKF L+++P+ T G+ TG S ++ ++SG + ++ P +R SR+S + + GG++ ++G DG + +L+ + + RI S+T L + ++Y L AV+VH+GG + GH+ +R L T D +S L RP W SD+T++ V ++ VL+S+AYMLFY R+
Sbjct: 2 ASSSNYHLSAIAAVTSIALAASGYALSTSISDSKRRRR---------RIATKIMKERDGKYIQGLINTGNSCFVNAVLQALATLTCLRSYLAERVDDPAEEPGDAPVTRNEAILRSVAYALYTTVEMLNRPLARPRSALPTDIIEALERKTKGTINRDQQDAHELFQIITSALTAEEEDQYNPRATSLFDPTAL-RQMTLETEALTNNAMENFETSSMSSIGTMGSMWSSFSVSTVGGHLHPRSRR-PRNPFTGLAASKISCMKCSYTAPIRHHTFDNISLTVPQ----------------------TSSCTLENCLDTYTKVDTLTDFQCR----KCVLISTAEALSRELDLQRSQVENGTGSPERIKRLELDIHRLKDAIHFNVEASLKGISLQPPAEMANTTKQTMFANPPKALCLHLSRSVYHPSGNIQKNHCNVKFSEFLNLSPYT-TNGFLN------------------------------TGDPSAALSSHNVSGGSSARLMPSPSRTSRTSLVYLRNMA------------------------GGQRFVHGRDGLNVALKSKDEDDQRIIRNALPSMT--LPSLRGIQYRLSAVVVHYGGHDSGHFITYRRKKLPTGLD---------------IRSPLETNDSRPPTKFW-RCSDQTIEEVDINVVLESEAYMLFYERD 580
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Match: A0A5D6Y518_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y518_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.870e-19 Identity = 100/365 (27.40%), Postives = 159/365 (43.56%), Query Frame = 3
Query: 483 VRGLQNVGNTCFINVVLQSLASISPFVRYLQVQVDAPPASIYQRPFTSELLQMMTDLRPA--HPPLGTLNPRKLRGLLAQKVERFKGFDQQDAQELFQMVVRLVNEEAETRPGTAAGSDIGPRLKGLKLLAEPQQESKDTKLNYQPSAKDAPRQMRSPLNPLCGSLASVTCCKECGK-KSIRVEPFVDLSLTLPEAKGISGEYLGGGFRAAGMGGINTSPVGLEHILQDFTDEQFVEGVECLTYKYNCVKFNSAHTGYQG-----------------EMMWYTISVWRKCPNRA-----VIGIHCTRR--------AYKRMLLARPPETLCLHFPRRHPNP-HGLMVKLKQLVKFPLKLDVAPFC 1475
V G+QN+GNTCF N +LQ+LA++ F YL V + PFT L + +L P H T+ PR+L L K+ F+G QQD+QEL Q ++ LV +E + +A D+G + LA+ + L ++ S ++ R NP+ G ++ C C + + + F+D+SL+ +G P+ L L+ +T + VEGVEC TY +F + + + E++ + S W A V+ + R +KR+ +R P+ C HF R+ +P G KL V FPL+LD++ FC
Sbjct: 330 VPGIQNLGNTCFFNAILQALAAVDSFHAYLAEVVRQAEQRARRVPFTRALRDCLDELAPTPEHETRATVVPRRLNAELVTKLAAFRGNKQQDSQELLQFLMNLVTDEQKR----SALRDVGLQDLHSDFLAK-----SISDLRHEASVRN-----RKCWNPMHGLQVNLLQCTRCKRYRPMSNHRFLDVSLSFAADQG-------------------KKPIQLADCLRMYTAPEAVEGVEC-TYCSLQQEFRATRSAFDAAKRQLERDKATLDDVALEIIQHERSEWLHTLETALGAAQVVNLEDLDRPVPRVLQDCHKRLQFSRSPDVFCFHFNRKVYHPWSGSARKLDTHVAFPLQLDMSAFC 660
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Match: A0A1U8K844_GOSHI (Ubiquitin carboxyl-terminal hydrolase n=26 Tax=Gossypium TaxID=3633 RepID=A0A1U8K844_GOSHI) HSP 1 Score: 103 bits (257), Expect = 4.060e-19 Identity = 153/590 (25.93%), Postives = 231/590 (39.15%), Query Frame = 3
Query: 483 VRGLQNVGNTCFINVVLQSLASISPFVRYLQVQVDAPPASIYQR-----PFTSELLQMMTDLRPAHPPLGTLNPRKLRGLLAQKVERFKGFDQQDAQELFQMVVRLVNEEAET--RPGTAAGSDIGPRLKGLKLLAEPQQESKDTKLNYQPSAKDAPRQMRSPLNPLCGSLASVTCCKECGKK-SIRVEPFVDLSLTLPEAKGISGEYLGGGFRAAGMGGINTSPVGLEHILQDFTDEQFVEGVECLTYKYNC-VKFNSAHTGYQGEMMWYTISVWRKCPNRAVIGIHCTRRAY----------------KRMLLARPPETLCLHFPRRHPNPHGLMVKLKQLVKFPLKLDVAPFCCTRGYCT------EGIAARQNQGAAASTTTANAAYDDAPRVPTTGRVSCPVTESSLSGSPAVKVPPVAARASRSSPQSVNGLKHAALPGGSL-ESTESGATADVATAEGGRKHMNGSDGRDSSLRGSNGNGSRISVTGGLRGEKRVEYDLRAVIVHHGGAEGGHYTAFRNLATSADGIGSTSDGGGGMIGITQSRLGLRRPQDDVWVSLSDETVKTVSVSEVLKSQAYMLFYGR 2156
V GLQN+GN CF+NV+LQ+LAS S F +L + +++ R P T L ++ +L A +L+P K+ L+ ++ F QQDA E F ++ + EE P + +DI L E ++ + K R + L P G + S+ C+ C + S+ + F L L P G S M G LE L F + +E C ++ +KF S E+M + I + + R C R++ K++ +AR P+ LCLH R N G ++KL+ + FPL LD++PF T T +G QNQ NA Y+ R+S P E S + V NG + PG SL E ++ T + A H +D +IS+T L + Y L +V+ H G GGHYT +R++ T +D S P W +SD V +VS +VL ++A +LFY R
Sbjct: 69 VPGLQNLGNNCFLNVILQALASCSYFQSFLPKILGECESTLVDRQGESLPLTITLSDLLEELGMAGERRVSLSPHKVMSALSLYIQNFDLTSQQDAAEAFLHLLSSLREEFSDIYLPNQSTLADIFASQTSRILTPERKEVQNEQK-----------RWQQHYLGPFDGIIGSILSCRSCSYQISLDFQFFHSLPL-FPVLYGAS----------TIMAGCT-----LEDCLWQFVLAEKLENYYCSHCWHSAAIKFLSCKGA--NEVMPFLIEIEKL--KRCGAEESCDCRSFCCLENLPWSNNFSNTLKQLCIARCPKILCLHLQRASINEFGELIKLQGHIAFPLILDLSPFMTTEVEITNWEGVHKGQLKLQNQKTMPHLNLINAQYESI-----LNRISKPTGEKVSSE---ILV--------------ANGSQCTTSPGESLPEKSKLYPTDGCSKASNIDMHEQHND--------------KISLTSKLPPSETKSYRLASVVEHFGRPGGGHYTVYRSMRTKSDEEDSDE---------------YSEPATTKWFCISDSQVCSVSEKDVLAAEASLLFYER 576
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Match: A0A8K1FL91_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL91_PYTOL) HSP 1 Score: 102 bits (254), Expect = 5.380e-19 Identity = 107/377 (28.38%), Postives = 166/377 (44.03%), Query Frame = 3
Query: 462 GEGKAKEVR--------GLQNVGNTCFINVVLQSLASISPFVRYLQVQVDAPPASIYQRPFTSELLQMMTDLRPAHPPLGTLN---PRKLRGLLAQKVERFKGFDQQDAQELFQMVVRLVNEEAETRPGTAAGSDIGPRLKGLKLLAEPQQESKDTKLNYQPSAKDAPRQMRSPLNPLCGSLASVTCCKECGK-KSIRVEPFVDLSLTLPEAKGISGEYLGGGFRAAGMGGINTSPVGLEHILQDFTDEQFVEGVECLTY----------KYNC--VKFNSAHTG--------YQGEMMWYTISVWRKCPNRAVIGIHCT-------RRAYKRMLLARPPETLCLHFPRRHPNPHGLMVKLKQLVKFPLKLDVAPFC 1475
G G A VR GLQN+GNTCF N +LQ+LA++ F +YL V+ PFT L + DL P G+ + P++L L K+ F+G QQD+QEL Q ++ +VN+E + A SD G LK L + + L ++ DA + R NPL G + C C + + + F+D+SL+ +A + P+ L L+ +T + + GVEC TY + +C ++ A TG +Q + YT+ ++ + + R YKR+ +R P+ C HF R+ + G KL V FP++LD++PFC
Sbjct: 12 GNGSASHVRPAQRYVVPGLQNLGNTCFFNAILQALAAVGSFPQYLDEVVEESEERGKHIPFTRALRDCIHDLTPVPSEAGSPSAVVPKRLNQELCTKLASFRGNKQQDSQELLQFLINIVNDEQKR----CARSDGG--LKDLFPSSLAPFSGSISDLCFE----DALEERR--WNPLYGLQVDLLQCSGCARYRPMTNRRFLDVSLSFGDAVD------------------SKKPITLWDCLRMYTAPEVISGVEC-TYCTANQELMLKRRDCKQLELEYATTGAMETELEVHQIKEDIYTLENLLAGDAESLYQLEISDSRCRALRDRYKRLQFSRCPDVFCFHFNRKVFHYSGHARKLDTHVVFPIELDMSPFC 357
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Match: A0A061F9Z2_THECC (Ubiquitin carboxyl-terminal hydrolase n=5 Tax=Byttnerioideae TaxID=214909 RepID=A0A061F9Z2_THECC) HSP 1 Score: 100 bits (248), Expect = 5.070e-18 Identity = 140/586 (23.89%), Postives = 224/586 (38.23%), Query Frame = 3
Query: 483 VRGLQNVGNTCFINVVLQSLASISPFVRYLQVQVDAPPASIYQR-----PFTSELLQMMTDLRPAHPPLGTLNPRKLRGLLAQKVERFKGFDQQDAQELFQMVVRLVNEEAETRPGTAAGSDIGPRLKGLKLLAEPQQESKDTKLNYQPSAKDAPRQMRSPLNPLCGSLASVTCCKECGKKSIRVEPFVDLSLTLPEAKGISGEYLGGGFRAAGMGGINTSPVGLEHILQDFTDEQFVEGVECL-TYKYNCVKFNSAHTGYQGEM-MWYTISVWRKCPNRAVIGIH---------CTRRAYKRMLLARPPETLCLHFPRRHPNPHGLMVKLKQLVKFPLKLDVAPFCCTR------GYCTEGIAARQNQGAAASTTTANAAYDDAPRVPTTGRVSCPVTESSLSGSPAVKVPPVAARASRSSPQSVNGLKHAALPGGSLESTESGATADVATAEG----GRKHMNGSDGRDSSLRGS--NGNGSRISVTGGLRGEKRVEYDLRAVIVHHGGAEGGHYTAFRNLATSADGIGSTSDGGGGMIGITQSRLGLRRPQDDVWVSLSDETVKTVSVSEVLKSQAYMLFYGR 2156
V GLQN+GN CF+NV+LQ+LAS S F +LQ +D S + P T L ++ +L A L+P K+ LA ++ F QQDA+E F ++ + EE + + + + PQ+E + + +Q L P G + S+ C+ C + I ++ SL L GG AG LE L+ F + +E C + +K+ S+ + E+ S C R+ + + CT K++ +AR P+ LC+H R N G ++KL+ + FPL LD++PF + G +G QNQ + N ++ H + P G + S A T+ G G+ +++ +DG +L +G ++S+T L + Y L +V+ H G GGHYT +R + +D S P W +SD V VS +VL ++A +LFY R
Sbjct: 72 VPGLQNLGNNCFLNVILQALASCSYFQSFLQKILDKCKLSPVEGQDENLPLTITLTALLEELGMAGERRVALSPHKVMRALALYIQNFDLTSQQDAEEAFLHLLTSLREEFSDIYLPSQSTLADAFVSQTSRILIPQKEDQSEQERWQQHF----------LGPFDGIIGSILTCQSCSSQQICLDFQFFHSLPLLPV------LYGGSTIMAGCT--------LEDCLRQFVMAEQIENYYCSHCWHIAAIKYLSSTGANEMEIERLKRCSAQDSCDCRSFLCLQKLPWSNNFSCT---LKQLSIARCPKILCIHLQRASINEFGELIKLQGHISFPLILDLSPFMTSEVEIKNCGGVQKGQVKLQNQKPSPCLNLINLQFETI-------------------------------------------FNHISKPMGEVSSEILAANDFQCTSHGESFPGKSNLSQTDGCSKALNTDMHEQHGDKVSLTSKLPPSETKLYQLVSVVEHFGRVGGGHYTVYRIMRAKSDEADSDE---------------YSEPATMQWFCISDSQVCRVSEKDVLAAEASLLFYER 572 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6672.14557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6672.14557.1 >prot_H-paniculata_contig6672.14557.1 ID=prot_H-paniculata_contig6672.14557.1|Name=mRNA_H-paniculata_contig6672.14557.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=628bp MSQNRAAVCGVGAIVLVGVGFAVYNGEKEASLFARAMYQGSSCGRYRIKRback to top mRNA from alignment at H-paniculata_contig6672:923..7018- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6672.14557.1 ID=mRNA_H-paniculata_contig6672.14557.1|Name=mRNA_H-paniculata_contig6672.14557.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6096bp|location=Sequence derived from alignment at H-paniculata_contig6672:923..7018- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6672:923..7018- >mRNA_H-paniculata_contig6672.14557.1 ID=mRNA_H-paniculata_contig6672.14557.1|Name=mRNA_H-paniculata_contig6672.14557.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3768bp|location=Sequence derived from alignment at H-paniculata_contig6672:923..7018- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |