mRNA_H-paniculata_contig12286.1452.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig12286.1452.1
Unique Name	mRNA_H-paniculata_contig12286.1452.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: D8LDT3_ECTSI (ATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 MET type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDT3_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 1.670e-117
Identity = 171/226 (75.66%), Postives = 195/226 (86.28%), Query Frame = 1

Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 678
            VYTG+KCV F+FT E  EG+LMG+GVLWLNA+VW L QLVA ATME+G LEP+LHPH RL+P SMAGHRCD+C+QRIK++D+K WRCKLCDFDLCR CYEKKD RG EGALRGDKGLR+E++L T+ YFKRAL LA PHW  F +   CL +SNTA IALPNFQGGILD+VV GD  GFKRYIVLY+ILSAVTGTIGS QRLCFRLAG R+AIGARNKLF+GV+SQ
Sbjct:  289 VYTGVKCVRFRFTKEVPEGVLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPH-RLFPGSMAGHRCDICQQRIKSQDAKGWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGLRDEKNLSTLTYFKRALRLAGPHWPFFMVAFACLAISNTARIALPNFQGGILDKVVNGDEEGFKRYIVLYIILSAVTGTIGSVQRLCFRLAGVRIAIGARNKLFRGVISQ 513

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BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S1DV78_HEMAN (Hypothetical protein (Fragment) n=5 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DV78_HEMAN)

HSP 1 Score: 221 bits (564), Expect = 2.060e-64
Identity = 106/229 (46.29%), Postives = 145/229 (63.32%), Query Frame = 1

Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLE---PALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 678
            ++ G+KC+ FKF +E  +G LMGLGVLW+N +VW  +++V      +G  +   P LHPH+      +  H CD C  RI  ++ KA+RCKLCDFDLC  C+ +KDLR  EG LRGDKG+R E+ L TM YFKRALGLA+  W LF L L+ LT +N   +  PN QG ILD V + D   +   ++ ++ +SA+TG     Q LCF + G R+A   RNKLF+G++ Q
Sbjct:  149 LFVGLKCIGFKFPDEAMQGTLMGLGVLWINIMVWSTSEVVKAHNKAEGLGQAKIPELHPHTLTLHRKVHNHWCDKCSTRI--DNGKAYRCKLCDFDLCMRCFTRKDLRTSEGLLRGDKGVRREDPLTTMDYFKRALGLAKREWALFLLALLSLTSNNLLQLVSPNLQGSILDAVFKADEGAYYELVMKFLAVSALTGVFSGAQSLCFNIMGRRLANTIRNKLFRGMILQ 375

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BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S0U4T8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U4T8_HEMAN)

HSP 1 Score: 211 bits (537), Expect = 2.090e-60
Identity = 99/229 (43.23%), Postives = 146/229 (63.76%), Query Frame = 1

Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLE---PALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 678
            ++ G+KC+ F+F +E  +G+LMGLGV+W+N +VW  +++V      +G  +   P LHPH+     ++  H C  C  RI  +  KA+RCKLCDFD+C  C+ +KDLR  EG LRGDKG+R E+ L T+ YF+RALGLAR  W LF L L+ L+ ++   +  PN QG ILD V   D P +  +++ ++ +SA+TG     Q L F + G R+A   RN+LF+G++SQ
Sbjct:   18 LFVGLKCIGFQFPDEAVQGLLMGLGVVWINIMVWSTSEVVKAHNKSEGLGKAKIPELHPHTLTLHRNVHAHWCGKCFTRI--DCGKAYRCKLCDFDVCMRCFTRKDLRTSEGLLRGDKGIRREDPLSTIDYFRRALGLARGEWALFLLALVSLSCNSALQLVSPNLQGSILDAVFEADEPAYYDHVMRFLYVSALTGVFSGAQTLSFNIMGRRLANTIRNRLFRGMISQ 244

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BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S0LVH6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LVH6_9CRYP)

HSP 1 Score: 202 bits (515), Expect = 4.890e-59
Identity = 102/229 (44.54%), Postives = 136/229 (59.39%), Query Frame = 1

Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGC---LEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 678
            V+ G+KC+ FKF  E  +G+LMG GVLW+NA+ W L +LV       G      P LHPHS      +  H CDVC  R+   D +A+RCKLCDFDLC  C+ +KD R  EG LRGDKG++   ++ T+ YF+RA+ LAR  W LF L +  L L+N A +  PN QG ILD V R D   F   I+LY+  S  TG     Q LCF +   R++   RN+L++G++ Q
Sbjct:  196 VFIGVKCIGFKFPVELEQGLLMGSGVLWINAMTWSLRELVKSHRQADGIGYVRVPELHPHSLCLDPRVHNHYCDVCGLRMS--DGRAYRCKLCDFDLCVRCFSRKDQRTAEGVLRGDKGIKLTSNVSTLSYFRRAVALARREWLLFFLSMTMLLLNNAAQLWAPNLQGRILDSVARVDHETFGVVILLYLGTSIATGLFAGIQGLCFSVIARRLSNRVRNQLYRGMIEQ 422

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BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S0YQB2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YQB2_9CRYP)

HSP 1 Score: 208 bits (530), Expect = 1.250e-58
Identity = 99/229 (43.23%), Postives = 144/229 (62.88%), Query Frame = 1

Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLE---PALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 678
            ++ G+KC+ F+F +E  +G+LMGLGV+W+N +VW  +++V      +G  +   P LHPH+     ++  H C  C  RI  +  KA+RCKLCDFD+C  C+ +KDLR  EG LRGDKG+R E+ L T+ YFKRALGLAR  W L  L L  L+ ++   +  PN QG ILD V   D P +  +++ ++ +SA+TG     Q L F + G R+A   RN+LF+G++SQ
Sbjct:  220 LFVGLKCIGFQFPDEAVQGLLMGLGVVWINIMVWSTSEVVKAHNKSEGLGKAKIPELHPHTLTLHRNVHNHWCGKCFTRI--DCGKAYRCKLCDFDVCMRCFTRKDLRTSEGLLRGDKGIRREDPLSTIDYFKRALGLARGEWALLLLALASLSCNSALQLVSPNLQGSILDAVFEADEPAYYDHVMRFLYVSALTGVFSGAQTLSFNIMGRRLANTIRNRLFRGMISQ 446

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BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A0N1IM85_LEPSE (ABC transporter n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1IM85_LEPSE)

HSP 1 Score: 146 bits (369), Expect = 9.360e-37
Identity = 76/218 (34.86%), Postives = 114/218 (52.29%), Query Frame = 1

Query:   13 IKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGAL-RGDKGLREE-EDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLF 660
            +KC+ F+F++ P + +LM + VLW+N  V+ L   +         L+P LHPH   +   +   +CDVC QRI  E  +   C  CDFD C  CY  K +   E  L RGD+G+  E + L    Y  R+LG   P W +  + + CL ++    +ALP++QG +LD +V  D  GF   I  Y +LS +T  +GS +  C  L    + +G R +LF
Sbjct:  172 LKCLFFRFSHAPLQQVLMAMTVLWVNLEVFALDSYLDDLIGGADVLKPHLHPHPLRFNHCVQATKCDVCNQRIIKEGME---CASCDFDCCLSCYRHKAMLSAENDLTRGDRGVASEVQQLSPFVYILRSLGFLIPFWRVVAVSIGCLIVNQLIRVALPHYQGKVLDSIVSKDCGGFWYNIQCYCVLSVITLVLGSARSFCSMLVTRNLTMGMRERLF 386

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BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A8J2S7K0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7K0_9STRA)

HSP 1 Score: 138 bits (348), Expect = 6.160e-34
Identity = 74/214 (34.58%), Postives = 112/214 (52.34%), Query Frame = 1

Query:   40 NEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGM-EGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 678
             + ++ +L+  GVL+ N   W   +LV   T + G   P +H H  +Y A+++ H CD+C   I+     AWRCKLCDFDLC  C  + D   + E  LRGD+G R E ++ +  Y +RA+ LA     L  + L  L  ++   +ALP +QG I+DRVVR +   F+  +V Y+ L    G   +  +  F +    +  G R  LFK V+ Q
Sbjct:  199 TKTAQILLVCAGVLFTNISAWLARELVRELTRDDGLYLPEVHAHPLVYDATLSRHWCDLCGTPIRR--GGAWRCKLCDFDLCVPCASRTDAATVGEHVLRGDRGARRETNVSSSSYLRRAISLAAGQKGLLFVALALLACNSALALALPKYQGRIVDRVVRKERGAFRNAVVQYLYLMIAQGLCQAAYQAAFSVVSRNILFGVRTTLFKSVIRQ 410

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BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S2JGA5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JGA5_9EUKA)

HSP 1 Score: 136 bits (343), Expect = 6.570e-34
Identity = 77/256 (30.08%), Postives = 127/256 (49.61%), Query Frame = 1

Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALV------WCLTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRG------------------------DVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 678
            VY GIKC+ F    +    + +   VL+L+ L       +   +LV   T E+G   P  HPH   +  ++  HRCD+CR RI    ++++ CK+C++D C  C+ KKD    EG +RGDKG+++  +L    Y  + L L  P   LF L L  L ++++  + +PN+QG I+D VV                          +   F   +++Y  LS  T  + + ++LCF L G R+ +  R+++F+ V+ Q
Sbjct:   10 VYVGIKCISFDCEWQQRPTLKLVQTVLFLSTLALVNLESFLSKRLVMVCTKEEGFFIPEFHPHRLYFQPNLTNHRCDMCRNRI----TESYICKMCNWDCCAACFNKKDKATGEGIIRGDKGVKDVRNLSFGRYLAKGLRLIAPELPLFLLALSLLAVNSSIRLFMPNYQGTIMDAVVNAHHACLAEAHNISLQNYTGTGSCAEEQRSFLDNVLIYFALSFATSVLSALRQLCFMLVGRRIILHIRDRVFESVLEQ 261

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BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S0L240_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L240_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 5.820e-32
Identity = 71/206 (34.47%), Postives = 106/206 (51.46%), Query Frame = 1

Query:  106 LTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKA--WRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVP-------------GFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 678
            +T+LV  AT  +  + PA HPH   +   + GH+C++CR      D K   +RC +CDFD C LC+ KKD    EG +RGDKG+R++ +L    Y +RA+ L RPH   F   L  L  ++   I +PN QGGI+DRV+                   F+ +++LY+  S   G +   Q L F +   R+    R KL+  ++ Q
Sbjct:    1 ITELVHVATERESIMVPAFHPHRLFFWPDLPGHKCNLCRNDKPERDGKMPRYRCNVCDFDACPLCFNKKDTHAGEGFMRGDKGVRKDIELSRGQYARRAVLLMRPHALYFAAALTALVGNSVLQIFVPNLQGGIIDRVISARENCTVSSESCAAAKLDFRDHVLLYLAFSVGIGVLVGFQVLFFSIVARRIRYWLRTKLYDRILMQ 206

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BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S2HQI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQI3_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.680e-25
Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 1

Query:   40 NEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGM-EGALRGDKGLREEEDLQTMGYFKRALGLARPHW 420
            ++  E IL+  GVLW+N  V+   Q+V  +T E G   P++H H       ++ H CD C  RIK  + +AWRCKLCDFD+C  C  +KD+  + E  LR DKG + +  +    Y KRA+GLA   W
Sbjct:    6 SKTIETILLCSGVLWINIEVYVARQIVLESTRESGLFLPSVHSHPLFLDKGVSLHWCDTCSTRIK--NGQAWRCKLCDFDMCTKCATRKDVATVSENVLRTDKGTKVDTPMSNFSYLKRAIGLAGRSW 131

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19


Match Name	E-value	Identity	Description
D8LDT3_ECTSI	1.670e-117	75.66	ATP-binding cassette transporter, subfamily B, mem...	[more]
A0A7S1DV78_HEMAN	2.060e-64	46.29	Hypothetical protein (Fragment) n=5 Tax=Hemiselmis...	[more]
A0A7S0U4T8_HEMAN	2.090e-60	43.23	Hypothetical protein (Fragment) n=1 Tax=Hemiselmis...	[more]
A0A7S0LVH6_9CRYP	4.890e-59	44.54	Hypothetical protein (Fragment) n=1 Tax=Cryptomona...	[more]
A0A7S0YQB2_9CRYP	1.250e-58	43.23	Hypothetical protein n=1 Tax=Hemiselmis tepida Tax...	[more]
A0A0N1IM85_LEPSE	9.360e-37	34.86	ABC transporter n=1 Tax=Leptomonas seymouri TaxID=...	[more]
A0A8J2S7K0_9STRA	6.160e-34	34.58	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S2JGA5_9EUKA	6.570e-34	30.08	Hypothetical protein (Fragment) n=1 Tax=Haptolina ...	[more]
A0A7S0L240_9EUKA	5.820e-32	34.47	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]
A0A7S2HQI3_9STRA	4.680e-25	40.63	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig12286	contig	H-paniculata_contig12286:263..7267 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	367.1
Seed ortholog evalue	6e-99
Seed eggNOG ortholog	2880.D8LDT3
KEGG ko	ko:K05657
KEGG TC	3.A.1.201
KEGG Pathway	ko02010,map02010
Hectar predicted targeting category	signal peptide
EggNOG free text desc.	ATPase activity, coupled to transmembrane movement of substances
EggNOG OGs	COG1132@1,KOG0058@2759
COG Functional cat.	V
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko02000
Exons	4
Model size	678
Cds size	678
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig12286.1452.1	prot_H-paniculata_contig12286.1452.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig12286 263..7267 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928950.253899-CDS-H-paniculata_contig12286:262..431	1622928950.253899-CDS-H-paniculata_contig12286:262..431	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12286 263..431 -
1691480678.8605702-CDS-H-paniculata_contig12286:262..431	1691480678.8605702-CDS-H-paniculata_contig12286:262..431	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12286 263..431 -
1622928950.2652466-CDS-H-paniculata_contig12286:2539..2742	1622928950.2652466-CDS-H-paniculata_contig12286:2539..2742	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12286 2540..2742 -
1691480678.8739731-CDS-H-paniculata_contig12286:2539..2742	1691480678.8739731-CDS-H-paniculata_contig12286:2539..2742	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12286 2540..2742 -
1622928950.2770872-CDS-H-paniculata_contig12286:5463..5596	1622928950.2770872-CDS-H-paniculata_contig12286:5463..5596	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12286 5464..5596 -
1691480678.8903582-CDS-H-paniculata_contig12286:5463..5596	1691480678.8903582-CDS-H-paniculata_contig12286:5463..5596	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12286 5464..5596 -
1622928950.2865713-CDS-H-paniculata_contig12286:7094..7267	1622928950.2865713-CDS-H-paniculata_contig12286:7094..7267	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12286 7095..7267 -
1691480678.900334-CDS-H-paniculata_contig12286:7094..7267	1691480678.900334-CDS-H-paniculata_contig12286:7094..7267	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12286 7095..7267 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig12286:263..7267-
coding sequence from alignment at H-paniculata_contig12286:263..7267-

protein sequence of mRNA_H-paniculata_contig12286.1452.1

>prot_H-paniculata_contig12286.1452.1 ID=prot_H-paniculata_contig12286.1452.1|Name=mRNA_H-paniculata_contig12286.1452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCL
EPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYE
KKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICL
TLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQ
RLCFRLAGFRMAIGARNKLFKGVVSQ

mRNA from alignment at H-paniculata_contig12286:263..7267-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig12286.1452.1 ID=mRNA_H-paniculata_contig12286.1452.1|Name=mRNA_H-paniculata_contig12286.1452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7005bp|location=Sequence derived from alignment at H-paniculata_contig12286:263..7267- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGTACACGGGCATCAAGTGCGTATTATTCAAGTTCACCAATGAGCCCTC
GGAAGGTATCCTGATGGGACTTGGTGTCTTATGGCTGAATGCCCTGGTGT
GGTGTTTGACGCAGCTGGTAGCAGGGGCCACGATGGAGCAGGGGTGCCTC
GAACCGGCTCTTCACCCGCACAGGTTCGTTAGGCTGAAAGTCAAGCGCTC
TCTCGTTGAGTACGGACGGGCACTGGCAGCAGCAGCAGCAGCAGCGGCAT
ACAGAGTAGTCGTGCAAGGTGCTGTGTACAATCACATGTGTATCATGTTT
TTGGTTGCGTGAAAGGAGAGGAATTGCCTTGTTGGCCTTTTGGACGTTTT
TTTTTTTTTTTTTTCCTGTTCCCGCATGATAACTCTGTTTTTTGCAATGT
GCTTGCGTTCATGATGAGACATGCAGTAAGTAGTACTGGAATAATGCGTG
TTGCTTTGTAATGGTCGGCTTTGCACGAACGTGTACACGGCTGGTGGTCG
GACTATGGTGACCCCCACTGCACTGCTCCGTGCTGTTTTTTTTTTTTTCT
AATGCCCAGGAGACCAGGGAGGAACTTTATATTACACTTGTAGTAACGCT
AACCTGTCAAATCGAAGGTTGCGTACGCTAGTTCTATTATGATGTCTCCA
TTTTTTTTTTCTCGGCCGATGTATGTATCCGGATCTCCGTAGGCTGAAGT
CTCGTCGGAGATTATTCGCAGCTTGGCGTCATGTACCGCTAACGAGCACA
CGGGAGCAAGACTGGGGTATAATAATGAGACACGCACCCACTAAAACCCT
TCAGATGCTTCCCAGATTTTCCCGGTACACTGGCTACCCTACCCATTCGG
CCTTTAGTCCGTCGTGCAGTCCGTGCTCTGTCCTCGTTCCCTCTAGCGCA
AAGCGTGTGTTATGACCAGCGCATAGCAACAAGTTGCGGCGCTCGTCACA
GCGTGATAGCACGATGTGCGTGATGTAAACAGACATGGTAAATGAAATGG
TGGTCTCTTGGTTTTTGAAAAAGTTCGGGCGAAACGTGGACGTGGATGTC
CATCGTATCCTGCTGGAATATGACTTTTTTGTAAATGGCAAACTTGGGAA
AAACAAAAATAATATATATATATATATACAGAGAAATGAACTACTCTGTA
AAGATTACCTCCCGTATCTTTGATGTTTTTCACTAGTCGTTTGTGTGCGT
TCTATCTGTTTCTCTCGTGTTATTCAAAATGTATCTTTTTCATGCTCTTG
CTCATCTATTTAGTCTCGATCCTCTAAGTATATATTAGTGTTCAATATGG
ATGAAATCGTCAAGGCGATCCACGGTTCGGACCGATTAATTTTCGTGTAG
GCTGGTTCTGGTTCTGGTTCTGGTTCGTACAGTTCAGCTGTGGGCAGACA
TATGCGGCAACGATCTGCAGGGTACGGATCTGCGGTGGGTAACCACGGGC
AGATCGTGCAGATCGTATGTACGGATCAGTCATGGACAAAAAATGTATGG
ATCAAAAATGGGGTTCATCGATATCGCAATCTTTCCCGTACGAGTGCGCC
GTACAAACTGCGAACGATCGGTCCTAGGCGGTCCTAATCGCGGCACAATT
ACGTTCAATGCACCATCTTGGTCGCTTGATATTGATTTTTTCACCCACAC
GTATGGAAACACGAATACAAGCAGACTGTATCCTGCGTCTATGGCGGGAC
ACCGGTGTGACGTCTGCCGGCAGAGAATAAAGACAGAGGACAGCAAGGCC
TGGAGGTGCAAGCTCTGCGACTTCGACCTCTGCCGATTGTGTTACGAGAA
AAAGGTTCGGGGTATCCTAACTGGAGTGCTCTCATACTGCAACCGGGGTA
ACTTTGTTTTCGAGCCCGGCTTTGTCGACATCAAAGCCCATTCATTTATG
TCCGTTGGAAAAAGCACATTCAGCTAAACTAGCGTTTGCAAATATGAGCA
TCTGTTGGTCCTGTATGGCTAATAGTAACCTCGGAGTCCCGAATATTCAC
TTCACCTCCAACAACTTCGCGGTGCAATACGAATCTCCGTTTCGAATTTC
GGAATTTTTCGGAGTATTAGGCGAATTGTAATGGATCGTGAAAATGACCT
TGTTTTGTATCGAGAGGTTGATGCTGGTGGAGTTGGGTCGGAGACGTGCA
GCTCACTATGAGCCAGCCATACAGGAGGATCAAAGCAAAATTTTACCACA
GCTCGGACGGAAGTCCTTCATCCATCGATGAAGGAATGTCGCGGGTTTTG
GAATTATACCGGCACGAGGAAGGATACCTGGTGCCTTCTGAAACCCACAA
ATCGATGGCATGGATATCCTGCACACCTTGGAAGAGCGTTCGACTTTTGA
GTTCTAGTGCACCTCCACAGATATTTCTTCTTTTGAGCATGACGGTTACG
TTGCGTGTTGCAATTACTTGGAAATCAAACCTTTGTCCAAGCTGGGGAAA
TTTACCAACAGATATTCAAAATTCTCGAACACCCTAATGACAGACGTATG
TATCTCGATGAAATAGATCTTTTGTGTATGATACATAGTTTCGGCATCGG
TTTAGCAAGCATCGTAGTAGCGAGATAAGTGGGTTTGAAGCGATGTTCAG
TGACCGCCGCGGGGGGCGTTCTCAGAGCACTGAGTACTCAATGATATGTA
GTATTTGTATGTAGGAGCGATCGATTTCACGTGTTTTTTTTTTTGTTTTT
TTTGTAGGGGCTGTGCAAAGGGAGAGCAAGCCGGATTTTTCGTTTTGTTC
GTTTTCTTTGTTTCTAGAGAAGTTTATATATACTGCAACAACCGTTACAT
TTGGATATTATTATTATTTTTTTAAATCTTTAAAGGGGAGGAGAAAACCT
TGGCCCAACATTTACCCCGAGACCGGGTTCGTGTGTCGGTTACCCAAAGA
CACGACGACACCGCCGCGAGGCAGTAATGTGAAATAGACACCCCGAGCGT
TCGCACGACTTTAGCCGAGGTAGTGTGGGACTCTCATCCACTAAAAACCT
CTATGTCGACTCCCTCAATTTGGTGCAGTGTACGCATCGCTCTGCTCAAT
GAGCTTCGGCTCTAGTGAAAATCATTTCCGAATCGAATGGATGAGGTACA
TGAACTATCATTCAAACACGGAGTAGGTAGAAAATCCAGCTCACTCGTTT
CGCATGGCTGTTAGTCCGCCAACTGATTAGGCCGCTCTCTTGGATCGAAC
GAGCATAACTTAACAGGAATACGTTGAGGGCTGCATGTATCATATCTAAG
CATGATGTATGTTTTTGCCGTATGCATTATGTATAATATACTTCATGTAT
GTGTGTCGACTGTGCGTTTTTGTTTTTTTTTTTTCCGTCGTCATTTTTCG
TCACTTTTTTCTCTATCCGAGCTACAAACCAAAATGTCACCACTTGTGCA
CGAGAGGTCACTTCTTATTTCGTCCGCCAGTAGGGCGGGTCGATCCTATC
TCCTTGGAGGTAGTATTGAAAAAAAGCATTGTTTATGAAAAGCAAGCCGA
GTAGACTACTCGCTGCTATATTTCCTTTGTGGCACGAGACAAGTAAGGTT
GATTGAGTTTATAGAGGCACGTCACCGTCTCCGACCGTTTAAATATATAT
ATATATATATATATATATATATGTATATATGATGCTACATATTTTTGGGG
GTTGATGTCCGAAATTTCACGGCAATAGGCGAGAAAATCTATATCGTTAG
CGAGCGCAGCGCAACAAAATAATTCGGCCGAAAAAGGATAATGTTTATGC
CCCTGTTGATATTTTCCCAACGAAAAAACAGTTAACGTCGGAGAAAAACA
TGAAAATGGTCAAACGTAGCCTTGTTGCTTGATCCGGATACAGAAATTGG
ACTGCTGTTCGGAATAGCGCGTATGAGTCTATCGGATTTTAGCTTTTTCA
ATTATCCCGATCGCAGCCTCTGAATAATGTGCTGGATCTGAAGATATAAT
CTGCCGAACACGGCCAATTTTGTGGCACAGAGGAAGTATACAGTACAGTA
CACTACATCACACTAACAGTACGCATCGGGACGCACATCAAACACAAAAT
ATTAACACAGAGTTAACAGGCACCGTGAAGATGTTTGGAGGAGCCAAGCC
TCTCTGTCTCTGTCTGTCTCTGTCTTTCTCTGTCTTACTCTGTCTTTCTC
TGTCTTTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTCTGTCTCTC
TGTCTCTATGTCTCTCTATGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTG
TCTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTG
TCTCTCTCTGTCTCTCTGTATCTCTCCGTATCTCTCTGTCTCTCTCCGTC
TCTCTCTCTGTCTCCGTCTCTGTCTCTGTCTCTATCTGAGGAGAGTGGCT
ACGCCAAAGTAACGCACACCCCTATCCTAGAACGAGGAGGATTTTCCGGG
CGTTTTTCTTGTTTTTTTTCCTTTCTATCTCCCGTTAGACTCATTCTACC
CCACTGACTGAACCTCCTAATCTAGGATCTACGAGGGATGGAAGGAGCCC
TGCGAGGTGACAAGGGCCTCCGCGAAGAGGAAGACCTACAGACGATGGGT
TATTTCAAGAGGGCGCTCGGGCTGGCGCGGCCTCATTGGCACCTGTTTGG
TCTGGGTTTAATATGCCTGACCCTGTCGAACACGGCGAACATTGCACTGC
CCAACTTCCAGGGAGGCATCTTGGATAGGTACTGTGCTGTAATGTTCTGT
TGTGTGTCGTTATGCTCTATTATATTCTGTTATATAGTGTCATGGTCTGT
TGTGCACTGTCATGTTCTGTTGTGTAGTGCCATGTTCTGTTGTGTAGTGC
CATATTCTGTTGTGTAGTGCCATGTTCTGTTGTGTAGTGTCATGCTCTGT
TGTGTAGTGTCATGCTCTGTTGTGTAGTGCCATATTCTGTTGTGTACTGC
CATGCTCTATTATGTACTGTCATGCTCTGTTATGTACTGTTATGTTCTGT
TGTGTGCTGTTCATCAGAAGAATACATTACCGTGTCCCTGATAAATAATA
GCCTGCAAGGCCACTTGTTATCATGGAATTTTTTGGAGAGATGATTTTCT
TGTTCTTGTTCAGTTTCGCCCCCGGGAAAAAAAGTTTGTTAAAATGATGG
AGAATGTTTTTGGATAGAAAATGACCTCCATTTTTTTGCTAGACCCAATT
AAACGTCTCCAAGTAGGAGAAATCTCCTCCAACCTTTTCCTCTTCATAGG
GGAGGGGGATAACAAACGTCCCAAACCCGTATAGAACTTGTTCGGGGTTC
GCTGCACGCATGCGGAAGGTCCCACGATTACAAGTGGGAGCCAATCACCG
ACACATGACGCAGTACATACCTGTTACACCTCACGTCCTCTCACACACAA
CAATAAACGCCGACTGTTTGTTACCAGCTGTCACACATGATACGTTGCCG
CCTACACAGCGAAGCTGGGCGCATGATGCCAAGGTGATGGCCGTGGGGCT
GCAGTCTTGCAGGAGGAACTAGAGTCCCCAACGCTGGGCAGCGACGGCGT
CCTTCAGGTGCTGCTGCAAGGCTGTCTGTCCCATGCTGCCGCCGTTGTCA
TGGATGACGATGGCTATAATGATAACCCATAATCCATAAGTCATTATCCA
TCCCACCTACACCTCGACAGAGCCGACCGATTACATACAATATATATGTA
GTTTTTGATCCGGAGAACGACGAGTCTAGGCCAAAGCCCACCTGCAAGAA
CAGTCGAGAACAGACGGCGTACCTGGACACCTGGTCGTGGTGGAGCATGT
ATGACGTTTGAATATATATATATATATATATATATATAACTATATTCTCA
TGCTCCATCATCGATTTATTTCTGACTGACCGTTTTCTCTCGGCCCGGCT
ATAATTCGGACGTCGTCTTTTTTCGCGTTTCTATTCTGTCCGAACTAAAG
TGACAGCCAAAAAAAACAAAAAAACTCGAAACTCGAAAAACTTGCCACGA
TAAGATGTCCGTCCGTCTATGGAGGTTATTTTTCCACCATGCTCTGTCTG
TCGAGTTGGATGTCGTTTTCGCTTACAAACACGGATAATCAACACCTAAG
GCAAAATCCACACACGCGTTAGGTTAGTTTGGACGAGGATAACATGAATA
CCGACAACACAGGTACTACTGCACGGGCGTAACGGTCGTTTTACTGCCGC
CTGTAGTACTAGCTTGAAGTGGGCGTTACTCCATCATGAACCGGACCCGG
AACATACATTTTACTTCATGGGCCGATGGTTATATGTACTTGGAAGAATA
TTTGTGTTCTGTAGATCCAGCCCGCTACTACACTATCAATGGTCACTGGT
ATCCAGCTATGTTGATAAAATACACCATCAAACTTAAGATCATGGTCTGT
ATGTGTGTGCCGCCTAAGCGGAACCTTTACCCATGGTTCGTCACGACTTG
AGTCGTTGACGAAATCGATCAATCGGTTGGTTGGTTCGCCTTCGAAGTAG
ACAGACAATTGCCCCGTGACAGGTTAGGGGGGGGGGAGGGGGGTACCTTG
GTCCCAACAACTGATGCGTTCATCTATTCATGAATTTAGCTGACCAACTA
ACTACTTGTTCCTTGACTCGCTCGTCACGTTGATTCTTGTTTTGTCCGGG
TTGCCTCTTGCTTCTATCAATTCATCCACCCCTTCATTCATGAATTTATG
GATTCATTTAGTACCCATGCACTCTCAGCCTTGGTCGATGCCCAACTATT
GGCCGCATGTCTATCTATACATGAGTACAAAGTCGTATTTGACCGCTCAC
ACTCCATGCCAAAACGAACCAATTTTTGCTTTACAGAGTCGTTCGGGGAG
ATGTGCCCGGGTTCAAACGGTATATCGTCCTATACGTGATACTATCGGCC
GTCACCGGGACAATCGGCAGCTGTCAGCGACTGTGCTTTCGCCTGGCGGG
GTTCAGGATGGCCATAGGCGCCCGAAATAAACTGTTCAAAGGTGTCGTTT
CGCAG

Coding sequence (CDS) from alignment at H-paniculata_contig12286:263..7267-

>mRNA_H-paniculata_contig12286.1452.1 ID=mRNA_H-paniculata_contig12286.1452.1|Name=mRNA_H-paniculata_contig12286.1452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1356bp|location=Sequence derived from alignment at H-paniculata_contig12286:263..7267- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGTACACGGGCATCAAGTGCGTATTATTCAAGTTCACCAATGAGCCCTC
GGAAGGTATCCTGATGGGACTTGGTGTCTTATGGCTGAATGCCCTGGTGT
GGTGTTTGACGCAGCTGGTAGCAGGGGCCACGATGGAGCAGGGGTGCCTC
GAACCGGCTCTTCACCCGCACAGGTGTACACGGGCATCAAGTGCGTATTA
TTCAAGTTCACCAATGAGCCCTCGGAAGGTATCCTGATGGGACTTGGTGT
CTTATGGCTGAATGCCCTGGTGTGGTGTTTGACGCAGCTGGTAGCAGGGG
CCACGATGGAGCAGGGGTGCCTCGAACCGGCTCTTCACCCGCACAGCAGA
CTGTATCCTGCGTCTATGGCGGGACACCGGTGTGACGTCTGCCGGCAGAG
AATAAAGACAGAGGACAGCAAGGCCTGGAGGTGCAAGCTCTGCGACTTCG
ACCTCTGCCGATTGTGTTACGAGAAAAAGCAGACTGTATCCTGCGTCTAT
GGCGGGACACCGGTGTGACGTCTGCCGGCAGAGAATAAAGACAGAGGACA
GCAAGGCCTGGAGGTGCAAGCTCTGCGACTTCGACCTCTGCCGATTGTGT
TACGAGAAAAAGGATCTACGAGGGATGGAAGGAGCCCTGCGAGGTGACAA
GGGCCTCCGCGAAGAGGAAGACCTACAGACGATGGGTTATTTCAAGAGGG
CGCTCGGGCTGGCGCGGCCTCATTGGCACCTGTTTGGTCTGGGTTTAATA
TGCCTGACCCTGTCGAACACGGCGAACATTGCACTGCCCAACTTCCAGGG
AGGCATCTTGGATAGGATCTACGAGGGATGGAAGGAGCCCTGCGAGGTGA
CAAGGGCCTCCGCGAAGAGGAAGACCTACAGACGATGGGTTATTTCAAGA
GGGCGCTCGGGCTGGCGCGGCCTCATTGGCACCTGTTTGGTCTGGGTTTA
ATATGCCTGACCCTGTCGAACACGGCGAACATTGCACTGCCCAACTTCCA
GGGAGGCATCTTGGATAGAGTCGTTCGGGGAGATGTGCCCGGGTTCAAAC
GGTATATCGTCCTATACGTGATACTATCGGCCGTCACCGGGACAATCGGC
AGCTGTCAGCGACTGTGCTTTCGCCTGGCGGGGTTCAGGATGGCCATAGG
CGCCCGAAATAAACTGTTCAAAGGTGTCGTTTCGCAGAGTCGTTCGGGGA
GATGTGCCCGGGTTCAAACGGTATATCGTCCTATACGTGATACTATCGGC
CGTCACCGGGACAATCGGCAGCTGTCAGCGACTGTGCTTTCGCCTGGCGG
GGTTCAGGATGGCCATAGGCGCCCGAAATAAACTGTTCAAAGGTGTCGTT
TCGCAG