prot_H-paniculata_contig12286.1452.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12286.1452.1
Unique Nameprot_H-paniculata_contig12286.1452.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length226
Homology
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: D8LDT3_ECTSI (ATP-binding cassette transporter, subfamily B, member 4, group TAP protein PpABCB4 MET type n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDT3_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 1.670e-117
Identity = 171/226 (75.66%), Postives = 195/226 (86.28%), Query Frame = 0
Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 226
            VYTG+KCV F+FT E  EG+LMG+GVLWLNA+VW L QLVA ATME+G LEP+LHPH RL+P SMAGHRCD+C+QRIK++D+K WRCKLCDFDLCR CYEKKD RG EGALRGDKGLR+E++L T+ YFKRAL LA PHW  F +   CL +SNTA IALPNFQGGILD+VV GD  GFKRYIVLY+ILSAVTGTIGS QRLCFRLAG R+AIGARNKLF+GV+SQ
Sbjct:  289 VYTGVKCVRFRFTKEVPEGVLMGIGVLWLNAMVWALNQLVADATMEEGLLEPSLHPH-RLFPGSMAGHRCDICQQRIKSQDAKGWRCKLCDFDLCRSCYEKKDRRGAEGALRGDKGLRDEKNLSTLTYFKRALRLAGPHWPFFMVAFACLAISNTARIALPNFQGGILDKVVNGDEEGFKRYIVLYIILSAVTGTIGSVQRLCFRLAGVRIAIGARNKLFRGVISQ 513          
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S1DV78_HEMAN (Hypothetical protein (Fragment) n=5 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DV78_HEMAN)

HSP 1 Score: 221 bits (564), Expect = 2.060e-64
Identity = 106/229 (46.29%), Postives = 145/229 (63.32%), Query Frame = 0
Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLE---PALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 226
            ++ G+KC+ FKF +E  +G LMGLGVLW+N +VW  +++V      +G  +   P LHPH+      +  H CD C  RI  ++ KA+RCKLCDFDLC  C+ +KDLR  EG LRGDKG+R E+ L TM YFKRALGLA+  W LF L L+ LT +N   +  PN QG ILD V + D   +   ++ ++ +SA+TG     Q LCF + G R+A   RNKLF+G++ Q
Sbjct:  149 LFVGLKCIGFKFPDEAMQGTLMGLGVLWINIMVWSTSEVVKAHNKAEGLGQAKIPELHPHTLTLHRKVHNHWCDKCSTRI--DNGKAYRCKLCDFDLCMRCFTRKDLRTSEGLLRGDKGVRREDPLTTMDYFKRALGLAKREWALFLLALLSLTSNNLLQLVSPNLQGSILDAVFKADEGAYYELVMKFLAVSALTGVFSGAQSLCFNIMGRRLANTIRNKLFRGMILQ 375          
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S0U4T8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U4T8_HEMAN)

HSP 1 Score: 211 bits (537), Expect = 2.090e-60
Identity = 99/229 (43.23%), Postives = 146/229 (63.76%), Query Frame = 0
Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLE---PALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 226
            ++ G+KC+ F+F +E  +G+LMGLGV+W+N +VW  +++V      +G  +   P LHPH+     ++  H C  C  RI  +  KA+RCKLCDFD+C  C+ +KDLR  EG LRGDKG+R E+ L T+ YF+RALGLAR  W LF L L+ L+ ++   +  PN QG ILD V   D P +  +++ ++ +SA+TG     Q L F + G R+A   RN+LF+G++SQ
Sbjct:   18 LFVGLKCIGFQFPDEAVQGLLMGLGVVWINIMVWSTSEVVKAHNKSEGLGKAKIPELHPHTLTLHRNVHAHWCGKCFTRI--DCGKAYRCKLCDFDVCMRCFTRKDLRTSEGLLRGDKGIRREDPLSTIDYFRRALGLARGEWALFLLALVSLSCNSALQLVSPNLQGSILDAVFEADEPAYYDHVMRFLYVSALTGVFSGAQTLSFNIMGRRLANTIRNRLFRGMISQ 244          
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S0LVH6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LVH6_9CRYP)

HSP 1 Score: 202 bits (515), Expect = 4.890e-59
Identity = 102/229 (44.54%), Postives = 136/229 (59.39%), Query Frame = 0
Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGC---LEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 226
            V+ G+KC+ FKF  E  +G+LMG GVLW+NA+ W L +LV       G      P LHPHS      +  H CDVC  R+   D +A+RCKLCDFDLC  C+ +KD R  EG LRGDKG++   ++ T+ YF+RA+ LAR  W LF L +  L L+N A +  PN QG ILD V R D   F   I+LY+  S  TG     Q LCF +   R++   RN+L++G++ Q
Sbjct:  196 VFIGVKCIGFKFPVELEQGLLMGSGVLWINAMTWSLRELVKSHRQADGIGYVRVPELHPHSLCLDPRVHNHYCDVCGLRMS--DGRAYRCKLCDFDLCVRCFSRKDQRTAEGVLRGDKGIKLTSNVSTLSYFRRAVALARREWLLFFLSMTMLLLNNAAQLWAPNLQGRILDSVARVDHETFGVVILLYLGTSIATGLFAGIQGLCFSVIARRLSNRVRNQLYRGMIEQ 422          
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S0YQB2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YQB2_9CRYP)

HSP 1 Score: 208 bits (530), Expect = 1.250e-58
Identity = 99/229 (43.23%), Postives = 144/229 (62.88%), Query Frame = 0
Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLE---PALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 226
            ++ G+KC+ F+F +E  +G+LMGLGV+W+N +VW  +++V      +G  +   P LHPH+     ++  H C  C  RI  +  KA+RCKLCDFD+C  C+ +KDLR  EG LRGDKG+R E+ L T+ YFKRALGLAR  W L  L L  L+ ++   +  PN QG ILD V   D P +  +++ ++ +SA+TG     Q L F + G R+A   RN+LF+G++SQ
Sbjct:  220 LFVGLKCIGFQFPDEAVQGLLMGLGVVWINIMVWSTSEVVKAHNKSEGLGKAKIPELHPHTLTLHRNVHNHWCGKCFTRI--DCGKAYRCKLCDFDVCMRCFTRKDLRTSEGLLRGDKGIRREDPLSTIDYFKRALGLARGEWALLLLALASLSCNSALQLVSPNLQGSILDAVFEADEPAYYDHVMRFLYVSALTGVFSGAQTLSFNIMGRRLANTIRNRLFRGMISQ 446          
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A0N1IM85_LEPSE (ABC transporter n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1IM85_LEPSE)

HSP 1 Score: 146 bits (369), Expect = 9.360e-37
Identity = 76/218 (34.86%), Postives = 114/218 (52.29%), Query Frame = 0
Query:    5 IKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGAL-RGDKGLREE-EDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLF 220
            +KC+ F+F++ P + +LM + VLW+N  V+ L   +         L+P LHPH   +   +   +CDVC QRI  E  +   C  CDFD C  CY  K +   E  L RGD+G+  E + L    Y  R+LG   P W +  + + CL ++    +ALP++QG +LD +V  D  GF   I  Y +LS +T  +GS +  C  L    + +G R +LF
Sbjct:  172 LKCLFFRFSHAPLQQVLMAMTVLWVNLEVFALDSYLDDLIGGADVLKPHLHPHPLRFNHCVQATKCDVCNQRIIKEGME---CASCDFDCCLSCYRHKAMLSAENDLTRGDRGVASEVQQLSPFVYILRSLGFLIPFWRVVAVSIGCLIVNQLIRVALPHYQGKVLDSIVSKDCGGFWYNIQCYCVLSVITLVLGSARSFCSMLVTRNLTMGMRERLF 386          
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A8J2S7K0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S7K0_9STRA)

HSP 1 Score: 138 bits (348), Expect = 6.160e-34
Identity = 74/214 (34.58%), Postives = 112/214 (52.34%), Query Frame = 0
Query:   14 NEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGM-EGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 226
             + ++ +L+  GVL+ N   W   +LV   T + G   P +H H  +Y A+++ H CD+C   I+     AWRCKLCDFDLC  C  + D   + E  LRGD+G R E ++ +  Y +RA+ LA     L  + L  L  ++   +ALP +QG I+DRVVR +   F+  +V Y+ L    G   +  +  F +    +  G R  LFK V+ Q
Sbjct:  199 TKTAQILLVCAGVLFTNISAWLARELVRELTRDDGLYLPEVHAHPLVYDATLSRHWCDLCGTPIRR--GGAWRCKLCDFDLCVPCASRTDAATVGEHVLRGDRGARRETNVSSSSYLRRAISLAAGQKGLLFVALALLACNSALALALPKYQGRIVDRVVRKERGAFRNAVVQYLYLMIAQGLCQAAYQAAFSVVSRNILFGVRTTLFKSVIRQ 410          
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S2JGA5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JGA5_9EUKA)

HSP 1 Score: 136 bits (343), Expect = 6.570e-34
Identity = 77/256 (30.08%), Postives = 127/256 (49.61%), Query Frame = 0
Query:    1 VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALV------WCLTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRG------------------------DVPGFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 226
            VY GIKC+ F    +    + +   VL+L+ L       +   +LV   T E+G   P  HPH   +  ++  HRCD+CR RI    ++++ CK+C++D C  C+ KKD    EG +RGDKG+++  +L    Y  + L L  P   LF L L  L ++++  + +PN+QG I+D VV                          +   F   +++Y  LS  T  + + ++LCF L G R+ +  R+++F+ V+ Q
Sbjct:   10 VYVGIKCISFDCEWQQRPTLKLVQTVLFLSTLALVNLESFLSKRLVMVCTKEEGFFIPEFHPHRLYFQPNLTNHRCDMCRNRI----TESYICKMCNWDCCAACFNKKDKATGEGIIRGDKGVKDVRNLSFGRYLAKGLRLIAPELPLFLLALSLLAVNSSIRLFMPNYQGTIMDAVVNAHHACLAEAHNISLQNYTGTGSCAEEQRSFLDNVLIYFALSFATSVLSALRQLCFMLVGRRIILHIRDRVFESVLEQ 261          
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S0L240_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L240_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 5.820e-32
Identity = 71/206 (34.47%), Postives = 106/206 (51.46%), Query Frame = 0
Query:   36 LTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKA--WRCKLCDFDLCRLCYEKKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICLTLSNTANIALPNFQGGILDRVVRGDVP-------------GFKRYIVLYVILSAVTGTIGSCQRLCFRLAGFRMAIGARNKLFKGVVSQ 226
            +T+LV  AT  +  + PA HPH   +   + GH+C++CR      D K   +RC +CDFD C LC+ KKD    EG +RGDKG+R++ +L    Y +RA+ L RPH   F   L  L  ++   I +PN QGGI+DRV+                   F+ +++LY+  S   G +   Q L F +   R+    R KL+  ++ Q
Sbjct:    1 ITELVHVATERESIMVPAFHPHRLFFWPDLPGHKCNLCRNDKPERDGKMPRYRCNVCDFDACPLCFNKKDTHAGEGFMRGDKGVRKDIELSRGQYARRAVLLMRPHALYFAAALTALVGNSVLQIFVPNLQGGIIDRVISARENCTVSSESCAAAKLDFRDHVLLYLAFSVGIGVLVGFQVLFFSIVARRIRYWLRTKLYDRILMQ 206          
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Match: A0A7S2HQI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQI3_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.680e-25
Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 0
Query:   14 NEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCLEPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYEKKDLRGM-EGALRGDKGLREEEDLQTMGYFKRALGLARPHW 140
            ++  E IL+  GVLW+N  V+   Q+V  +T E G   P++H H       ++ H CD C  RIK  + +AWRCKLCDFD+C  C  +KD+  + E  LR DKG + +  +    Y KRA+GLA   W
Sbjct:    6 SKTIETILLCSGVLWINIEVYVARQIVLESTRESGLFLPSVHSHPLFLDKGVSLHWCDTCSTRIK--NGQAWRCKLCDFDMCTKCATRKDVATVSENVLRTDKGTKVDTPMSNFSYLKRAIGLAGRSW 131          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12286.1452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LDT3_ECTSI1.670e-11775.66ATP-binding cassette transporter, subfamily B, mem... [more]
A0A7S1DV78_HEMAN2.060e-6446.29Hypothetical protein (Fragment) n=5 Tax=Hemiselmis... [more]
A0A7S0U4T8_HEMAN2.090e-6043.23Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0LVH6_9CRYP4.890e-5944.54Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0YQB2_9CRYP1.250e-5843.23Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A0N1IM85_LEPSE9.360e-3734.86ABC transporter n=1 Tax=Leptomonas seymouri TaxID=... [more]
A0A8J2S7K0_9STRA6.160e-3434.58Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2JGA5_9EUKA6.570e-3430.08Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S0L240_9EUKA5.820e-3234.47Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2HQI3_9STRA4.680e-2540.63Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 125..226
e-value: 5.6E-12
score: 47.5
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 130..225
NoneNo IPR availableGENE3D3.30.60.90coord: 66..109
e-value: 3.5E-6
score: 28.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 205..226
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 50..102
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 145..226
score: 10.412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12286contigH-paniculata_contig12286:263..7267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12286.1452.1mRNA_H-paniculata_contig12286.1452.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12286 263..7267 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12286.1452.1 ID=prot_H-paniculata_contig12286.1452.1|Name=mRNA_H-paniculata_contig12286.1452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
VYTGIKCVLFKFTNEPSEGILMGLGVLWLNALVWCLTQLVAGATMEQGCL
EPALHPHSRLYPASMAGHRCDVCRQRIKTEDSKAWRCKLCDFDLCRLCYE
KKDLRGMEGALRGDKGLREEEDLQTMGYFKRALGLARPHWHLFGLGLICL
TLSNTANIALPNFQGGILDRVVRGDVPGFKRYIVLYVILSAVTGTIGSCQ
RLCFRLAGFRMAIGARNKLFKGVVSQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036640ABC1_TM_sf
IPR011527ABC1_TM_dom