prot_H-paniculata_contig65996.14472.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig65996.14472.1
Unique Nameprot_H-paniculata_contig65996.14472.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length98
Homology
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BLAST of mRNA_H-paniculata_contig65996.14472.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 7.860e-6
Identity = 33/98 (33.67%), Postives = 55/98 (56.12%), Query Frame = 0 
Query:    2 LWLSVGENAV-PRVSAVMSKLATMVWEQIFSKTEPNPVQRVVLGGDNYQDCKMGDGASEHQARNGAGYVAELMRKHEKRCLVVADNVWELGVIEELKK 98
            LWLSVG+ A   R+  +++ LA MV+E +F K    P+++ V+G D+                + A Y+  L  +  +R LVVAD+VW+  V++EL++
Sbjct:   99 LWLSVGQRAGRDRLLELLTSLAGMVYETVFQK-RCRPLRKGVIGTDD---------------EDPAAYIQCLQVERPRRFLVVADDVWQTEVLDELRR 180
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65996.14472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JL31_9PHAE7.860e-633.67NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig65996contigH-paniculata_contig65996:506..799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig65996.14472.1mRNA_H-paniculata_contig65996.14472.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig65996 506..799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig65996.14472.1 ID=prot_H-paniculata_contig65996.14472.1|Name=mRNA_H-paniculata_contig65996.14472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
MLWLSVGENAVPRVSAVMSKLATMVWEQIFSKTEPNPVQRVVLGGDNYQD
CKMGDGASEHQARNGAGYVAELMRKHEKRCLVVADNVWELGVIEELKK
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