mRNA_H-paniculata_contig6590.14463.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6590.14463.1
Unique NamemRNA_H-paniculata_contig6590.14463.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Match: D8LDI6_ECTSI (Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI6_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 1.970e-127
Identity = 189/204 (92.65%), Postives = 197/204 (96.57%), Query Frame = 1 
Query:    1 GWDPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKSGTLMTLSSWSTTALEDVAKAGGPGGARWFQLYVYKDRVITTQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHAEGTKDGGNDS 612
            GW+PVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVS VDT+T VLG+K++SPICIAPTAMQRMAHD+GECATA AAAK+G LMTLSSWSTT+LEDVAKAGGPGGARWFQLYVYKDR IT QLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHA GTKDGGNDS
Sbjct:   23 GWEPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSMVDTSTSVLGQKISSPICIAPTAMQRMAHDSGECATAGAAAKAGALMTLSSWSTTSLEDVAKAGGPGGARWFQLYVYKDRKITEQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHASGTKDGGNDS 226
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BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Match: A0A836CMB2_9STRA (Glycolate oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB2_9STRA)

HSP 1 Score: 310 bits (795), Expect = 1.150e-102
Identity = 160/204 (78.43%), Postives = 178/204 (87.25%), Query Frame = 1 
Query:    1 GWDPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKSGTLMTLSSWSTTALEDVAKAGGPGGARWFQLYVYKDRVITTQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHAEGTKDGGNDS 612
            GW+PV+VRE+E+ A++ML KNAFDYYASGANDM+TLRENRAAF+RLR+RPRI+RDVS     T VLG  V SPICIAP+AMQRMAHD GE AT+AAA KS TLMTLSSWSTT LE+VA A  PGG RWFQLYVYKDR +T +LVKRA A+GYTALAVTVDTPVLGRREAD+RNRFKLP HLTMGNF+ AGGAHAEGTKDGG DS
Sbjct:   26 GWEPVSVREYEKAAEMMLPKNAFDYYASGANDMITLRENRAAFSRLRIRPRIMRDVSSTSNKTTVLGIPVNSPICIAPSAMQRMAHDDGEKATSAAAGKSNTLMTLSSWSTTPLEEVA-AAYPGGPRWFQLYVYKDRKLTAELVKRAEASGYTALAVTVDTPVLGRREADVRNRFKLPVHLTMGNFIGAGGAHAEGTKDGGKDS 228
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BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Match: A0A6V1QYU9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QYU9_HETAK)

HSP 1 Score: 306 bits (785), Expect = 3.320e-101
Identity = 156/207 (75.36%), Postives = 175/207 (84.54%), Query Frame = 1 
Query:    1 GWDPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKSGTLMTLSSWSTTALEDVAKAGG---PGGARWFQLYVYKDRVITTQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHAEGTKDGGNDS 612
            GW+PVNVRE+E HA   + KNAFDYYASGANDM+TLRENRAA+ RLR+RPRILRDVSKVD +T +LG+K++SPIC+AP+AMQRMAH+ GE ATA A AKSGTLMTLSSWST ALE+VA+AG    P   RWFQLYVYKDR +   LV+RA AAGY A AVTVDTPVLGRREAD+RNRFKLP HLTMGNF S GGAHA GTKDGG DS
Sbjct:   21 GWEPVNVREYEAHAAEYMPKNAFDYYASGANDMITLRENRAAYQRLRMRPRILRDVSKVDISTTILGDKISSPICVAPSAMQRMAHEDGENATARACAKSGTLMTLSSWSTIALEEVAQAGAAAEPSAPRWFQLYVYKDRDVVLDLVRRAEAAGYKAFAVTVDTPVLGRREADVRNRFKLPTHLTMGNFASKGGAHASGTKDGGKDS 227
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BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Match: W7UBQ6_9STRA (Peroxisomal glycolate oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBQ6_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.570e-92
Identity = 149/204 (73.04%), Postives = 167/204 (81.86%), Query Frame = 1 
Query:    1 GWDPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKSGTLMTLSSWSTTALEDVAKAGGPGGARWFQLYVYKDRVITTQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHAEGTKDGGNDS 612
            G +PVN+REFE +A+  L KNAFDYYASGANDM+TLRENRAAF RLR+RPRILRDVS VDT T VLG+ VA PIC+APTAMQRMA   GE ATA A A+  TLMTLSSWSTT++EDVA A      +WFQLYVYKDR +T +L +RA  AGY ALA+TVDTPVLGRREAD+RNRFKLP HLTM NF  AGG+HAEGTKDGG DS
Sbjct:   22 GPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAPI--PKWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDS 223
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BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Match: A0A7S2V919_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V919_9STRA)

HSP 1 Score: 265 bits (676), Expect = 1.850e-85
Identity = 135/172 (78.49%), Postives = 153/172 (88.95%), Query Frame = 1 
Query:   97 MVTLRENRAAFNRLRLRPRILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKSGTLMTLSSWSTTALEDVAKAGGPGGARWFQLYVYKDRVITTQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHAEGTKDGGNDS 612
            M+TLRENRA + RLRLRPRI+RDVS+ D++T VLG+KV+SPIC+AP+AMQRMAHD GECAT+ A AK+GTLMTLSSWSTTALE+V+ A  PGG RWFQLYVYKDRV+T  LV+RA AAGY ALAVTVDTPVLGRREAD+RNRFKLP HLTMGNFV  GG+HAEGTKDGG DS
Sbjct:    1 MITLRENRAGYTRLRLRPRIMRDVSQTDSSTTVLGDKVSSPICVAPSAMQRMAHDDGECATSKACAKTGTLMTLSSWSTTALEEVSDAA-PGGLRWFQLYVYKDRVVTLDLVRRAEAAGYKALAVTVDTPVLGRREADVRNRFKLPPHLTMGNFVGKGGSHAEGTKDGGKDS 171
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BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Match: A0A7R9UGG8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG8_9STRA)

HSP 1 Score: 263 bits (671), Expect = 5.770e-84
Identity = 138/201 (68.66%), Postives = 158/201 (78.61%), Query Frame = 1 
Query:    1 GWDPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKSGTLMTLSSWSTTALEDVAKAGGPGGARWFQLYVYKDRVITTQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHAEGTKDGG 603
            G  PVN++E+E  A+  + +NA+DYYASGA DM+TLRENRAA+ RLR RPRILRDVS +DT T VLG+KV+ PICIAPTAMQ+MAH  GE ATA AA K G LMTLSSWST +LE+VA+   P   RWFQLYVYKDR +T  LV+RA   GY ALAVTVDTPVLGRREAD+RNRF LP HLTMGNF   GGAH+ GTK  G
Sbjct:   23 GPTPVNLKEYEAFAKNNMPRNAWDYYASGALDMITLRENRAAWGRLRFRPRILRDVSSIDTATTVLGQKVSMPICIAPTAMQQMAHPDGERATARAARKKGALMTLSSWSTLSLEEVAEEA-PDSFRWFQLYVYKDRDVTLDLVRRAERNGYKALAVTVDTPVLGRREADVRNRFSLPSHLTMGNFAGVGGAHSSGTKSSG 222
[Close]
BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Match: A0A7S2FX59_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FX59_9STRA)

HSP 1 Score: 258 bits (658), Expect = 1.870e-82
Identity = 133/183 (72.68%), Postives = 151/183 (82.51%), Query Frame = 1 
Query:   46 LMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKSGTLMTLSSWSTTALEDVAKAGGPGGARWFQLYVYKDRVITTQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHAEGTK 594
            + L KNAFDYYASGANDM+TLRENRAAF RLR+RPRILR+V  V+  T +LG+KV+ PI ++PTAMQ+MAH  GE ATA AA K+GTLMTLSSWST  LE+VA A  PGG RWFQLYVYKDR +T  L+KRA AAGY ALAVTVDTPVLGRREAD+RN+F LP HLTMGNF + GG HA GTK
Sbjct:    1 MKLDKNAFDYYASGANDMITLRENRAAFTRLRMRPRILRNVEHVNMETTILGDKVSMPILLSPTAMQQMAHADGELATARAAQKAGTLMTLSSWSTLPLEEVA-AAAPGGLRWFQLYVYKDREVTLDLIKRAEAAGYKALAVTVDTPVLGRREADVRNKFSLPAHLTMGNFANTGGDHASGTK 182
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BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Match: A0A7S1UI71_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI71_9STRA)

HSP 1 Score: 256 bits (654), Expect = 2.180e-81
Identity = 132/201 (65.67%), Postives = 158/201 (78.61%), Query Frame = 1 
Query:    1 GWDPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKSGTLMTLSSWSTTALEDVAKAGGPGGARWFQLYVYKDRVITTQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHAEGTKDGG 603
            G +PVN++EFE +A+  + +NA+DYYASGA DM+TLRENRAA+ RLR RPRILRDV+ VD +T VLG+KV+ PICIAPTAMQ+MAH  GE A   AA   G LMTLSSWST ++E+VA+   P   RWFQLYVYKDR +T  L++RA  AGY A AVTVDTP+LGRREAD+RNRF LP HLTMGNF + GG H+ GTKD G
Sbjct:   24 GPEPVNLKEFEAYAKNNMPRNAWDYYASGALDMITLRENRAAWGRLRFRPRILRDVTHVDASTTVLGKKVSMPICIAPTAMQQMAHPEGERANVLAAKNKGCLMTLSSWSTLSMEEVAEVA-PDHPRWFQLYVYKDREVTMDLIRRAERAGYLAFAVTVDTPLLGRREADVRNRFSLPSHLTMGNFANKGGDHSSGTKDAG 223
[Close]
BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Match: A0A7S4KCV1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KCV1_9STRA)

HSP 1 Score: 252 bits (644), Expect = 7.900e-80
Identity = 136/203 (67.00%), Postives = 154/203 (75.86%), Query Frame = 1 
Query:   10 PVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKSGTLMTLSSWSTTALEDVAKAGGPGGARWFQLYVYKDRVITTQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGA--HAEGTKDGGNDS 612
            P+NV+E+E HA   L KNAFDY+ SGANDM+TLRENR AF+RLRLRPR+LR+V  VD +T VLG  V  PIC+APTAMQ MAH+ GE ATA A     TLMTLSSWSTT+LE+  +A  P G +WFQLYVYKDR IT  LV+RA  AGY ALAVTVDTP LGRRE D+RNRFKLP HLTM NFV   G   H+ G K GGNDS
Sbjct:   31 PINVKEYEAHASRTLPKNAFDYFHSGANDMITLRENRDAFDRLRLRPRVLRNVQTVDMSTTVLGTPVPFPICVAPTAMQCMAHEDGEKATARACDHHQTLMTLSSWSTTSLEETMEAA-PSGPKWFQLYVYKDRGITADLVRRAERAGYRALAVTVDTPCLGRREPDVRNRFKLPSHLTMKNFVEMSGDNDHSNGVKKGGNDS 232
[Close]
BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Match: K3X2I6_GLOUD (FMN hydroxy acid dehydrogenase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2I6_GLOUD)

HSP 1 Score: 237 bits (605), Expect = 3.090e-74
Identity = 123/193 (63.73%), Postives = 149/193 (77.20%), Query Frame = 1 
Query:   10 PVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKSGTLMTLSSWSTTALEDVAKAGGPGGARWFQLYVYKDRVITTQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHAEG 588
            P+NV EFE +A+  L KNA+DYYASGA++M +L ENR AF RL LRPR+LRDVS +D +T VLG+++ASP+C+APTAMQRMAH  GE A+ AAAAKSGT   LSS STT+LEDVA A G G  RWFQLYV+KDR +T  LV RA  AGY A+ +TVDTP+LG RE D+RN+F LP+HL + NF   GG HA G
Sbjct:   11 PLNVLEFEAYAKEYLPKNAYDYYASGADEMYSLSENRDAFKRLTLRPRVLRDVSNMDISTSVLGQRIASPVCVAPTAMQRMAHPEGELASTAAAAKSGTGFILSSLSTTSLEDVAVANGKG-LRWFQLYVFKDRQLTRDLVLRAERAGYKAIVLTVDTPMLGHREPDVRNKFSLPKHLELANFTHVGGEHAHG 202
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6590.14463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDI6_ECTSI1.970e-12792.65Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A836CMB2_9STRA1.150e-10278.43Glycolate oxidase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6V1QYU9_HETAK3.320e-10175.36Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
W7UBQ6_9STRA2.570e-9273.04Peroxisomal glycolate oxidase n=2 Tax=Monodopsidac... [more]
A0A7S2V919_9STRA1.850e-8578.49Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9UGG8_9STRA5.770e-8468.66Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2FX59_9STRA1.870e-8272.68Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1UI71_9STRA2.180e-8165.67Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4KCV1_9STRA7.900e-8067.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K3X2I6_GLOUD3.090e-7463.73FMN hydroxy acid dehydrogenase domain-containing p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6590contigH-paniculata_contig6590:7014..12123 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score241.1
Seed ortholog evalue4.5e-61
Seed eggNOG ortholog115417.EPrPW00000021081
Preferred nameGOX
KEGG rclassRC00042
KEGG koko:K11517,ko:K13344
KEGG TC3.A.20.1
KEGG ReactionR00475
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00630,map01100,map01110,map01120,map01130,map01200,map04146
KEGG ModuleM00532
Hectar predicted targeting categoryother localisation
GOsGO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0003674,GO:0003824,GO:0003973,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0005829,GO:0005840,GO:0005911,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008891,GO:0009058,GO:0009506,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009725,GO:0009735,GO:0009853,GO:0009987,GO:0010033,GO:0010109,GO:0010204,GO:0016020,GO:0016032,GO:0016491,GO:0016614,GO:0016899,GO:0016999,GO:0017000,GO:0017144,GO:0019048,GO:0019222,GO:0022626,GO:0023052,GO:0030054,GO:0031323,GO:0031347,GO:0031349,GO:0032991,GO:0035821,GO:0042221,GO:0042579,GO:0042742,GO:0042743,GO:0043094,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044003,GO:0044237,GO:0044249,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0048046,GO:0048518,GO:0048583,GO:0048584,GO:0050665,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0055044,GO:0055114,GO:0065007,GO:0072593,GO:0080134,GO:0098542,GO:1903409,GO:1990904
EggNOG free text desc.Peroxisomal (S)-2-hydroxy-acid oxidase. Source PGD
EggNOG OGs1MD1U@121069,COG1304@1,KOG0538@2759
Ec32 ortholog descriptionGlycolate Oxidase
Ec32 orthologEc-15_000450.1
EC1.1.3.15
COG Functional cat.C
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons4
Model size612
Cds size612
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6590.14463.1prot_H-paniculata_contig6590.14463.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6590 7014..12123 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930776.6438677-CDS-H-paniculata_contig6590:7013..71321622930776.6438677-CDS-H-paniculata_contig6590:7013..7132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6590 7014..7132 +
1691481447.2343478-CDS-H-paniculata_contig6590:7013..71321691481447.2343478-CDS-H-paniculata_contig6590:7013..7132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6590 7014..7132 +
1622930776.6578155-CDS-H-paniculata_contig6590:9705..98241622930776.6578155-CDS-H-paniculata_contig6590:9705..9824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6590 9706..9824 +
1691481447.2456796-CDS-H-paniculata_contig6590:9705..98241691481447.2456796-CDS-H-paniculata_contig6590:9705..9824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6590 9706..9824 +
1622930776.6776292-CDS-H-paniculata_contig6590:10675..108421622930776.6776292-CDS-H-paniculata_contig6590:10675..10842Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6590 10676..10842 +
1691481447.253701-CDS-H-paniculata_contig6590:10675..108421691481447.253701-CDS-H-paniculata_contig6590:10675..10842Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6590 10676..10842 +
1622930776.6987405-CDS-H-paniculata_contig6590:11916..121231622930776.6987405-CDS-H-paniculata_contig6590:11916..12123Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6590 11917..12123 +
1691481447.2744107-CDS-H-paniculata_contig6590:11916..121231691481447.2744107-CDS-H-paniculata_contig6590:11916..12123Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6590 11917..12123 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6590.14463.1

>prot_H-paniculata_contig6590.14463.1 ID=prot_H-paniculata_contig6590.14463.1|Name=mRNA_H-paniculata_contig6590.14463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
GWDPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRP
RILRDVSKVDTTTYVLGEKVASPICIAPTAMQRMAHDTGECATAAAAAKS
GTLMTLSSWSTTALEDVAKAGGPGGARWFQLYVYKDRVITTQLVKRALAA
GYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHAEGTKDG
GNDS
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mRNA from alignment at H-paniculata_contig6590:7014..12123+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6590.14463.1 ID=mRNA_H-paniculata_contig6590.14463.1|Name=mRNA_H-paniculata_contig6590.14463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5110bp|location=Sequence derived from alignment at H-paniculata_contig6590:7014..12123+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGATGGGACCCAGTAAACGTCCGGGAGTTCGAGCGTCATGCCCAACTGAT
GCTGTCGAAGAATGCTTTTGACTACTACGCCAGCGGGGCCAACGACATGG
TCACGCTCAGGGAAAACAGGTACAATGTGCACCCCGATTAACGGCGGTCG
TTTTCGAAGGTCAAATTGCACTCAAATAACAACAACATAACCCCATCCTT
CACCACAAAAGGAGGGAGATAATGGGACAGCACGAGATCGCCGTCCCAAG
TGCATGTCACATTCCGCACCTGGTATCCTCGTTTGTAAGAATTACGAAAA
AACCAAAGACCGGAATGAAAATTGAGATCAAACCCTAGCACCCGATATTC
TCAAGTGACATGAATAAATGGCAGAGATGAAGCCGCTCGAGTAAGGTCCA
TGTGACGGTGGAGGAAGACCTTGTATACAGGGTAGGGTGACCATGCTTGA
AAGAAAAACGATGGAACATACCATTTTACTTGTTGTGGGAATCATGAACT
CTACTTTGACACACGTACTGATGGGCAGGCGGTCTCTTCAATGATTCTGG
TAAAAGATCGCCTTGTCCCTAGGCTTCCTCGTGTCAATTATTCAGCATTG
TTTTATGTTGGGTTTTTTTCACCGCAGCGACCTCGATCGGCTCTGTCCAC
AATGAACGCTCTTCTGTTTATCTTCATGACCCACTATATACCCCCACTAA
GTTCCGCTGAAATAAGAGTTGATTTGGACGTGGTATTGGCTCTCTAATCG
CGCCCATCTGTCAACACGAAGCTCCCTCGTAGTAATATATGCGCCCGCGA
AATGAAAACATGTTGGTTTATTTCGATTTGGTCCTGTGTGGCGCATATAC
GCTTCAGGGTAAGCTTCAGGTCCCCGACGTCCAGCCCACCTGCACAAACG
TCCCTATACAGAAACGTGTTCCCCATGAGGTGTGGAAGGTTTTGTGAGTT
TGACGGAATCCGACGGGTTATCACAAGGAAGTCGCAAGGGGTGGTTGAGA
CGGTGTGAAGCGGTCAGATACCCTACTGTGAGGCCTCTACTGTCTTTGTT
CTCTAGACACGGTGTATAGGGTTGGCTGAGCGATGCCGTGAGCGGTTATG
CGGATGTCGACGAACCAATTGCACTTGAGCTACAGTGTTCGCCAGTTGAG
GTGGATGCGTCGATGTGGGCTTCGATATCCACCCGGCTCCTCAAAAGATC
TGCATATCAGTTCGGTAGACGTCAAGGAAAGTAACTCCCTCGCGGCAGGT
CACCAGACCGTTTCGCATCGCCCACACCTACCTAGGAGGAGCTTCTGCAT
GCTTCATCTCTCACATATGAATGCTTGGTGATAATTGTTGCGAAAATAGT
CACCATCTATGGCATATGGTGCACAAATCCTACCTGGGAAGAAGATGGTG
GGAAAAAAAATGCATCTTCTGATCCAAATTTTGATTCCTCGATACAAAAT
TGAACGCTTCTCGCGTGGGTGGTCGATTTGGAATGACGGGCACGGTTTCC
TTAGACTCGGCGGTGGAGAATCGACACTCGTTTTTAATAAAGTCATTTCA
AAGTTGGTGTGGAAGACGTGCCCCCCGATCAGGTCGAAATTTTTCGAACG
AAATAGGATATTGCTTCACTTTTTTTTGAGTTTTATGAAAATTCATGTGA
AGAACAAATGTCAGACTACTCTACAATGTTGAGCTTTCAGAAAATCTGTT
CCCCATTAGTGATGACGTTTTTAATGTATCCATATTCCCCTGTACTCGAG
ATATTATTGGGTATGGTGAGAGGTATCGTGCATCGTCACGACTGGAAGTC
CCGTGTACCTAAACCTGCACAACAGGCGAAATGCCCATAAATTGTTCCGA
AATGGATGCTCCTCATATATGGCAAATAGTTCCGTGTGTACTAACGTCAC
TACACAAACGTAGTTCTAGCGGTACTTTGAACAGAGTTATCATGGATTCG
TCGTGCACATGAGATGCAAGGTCGGTTTTCGACTTAAGCCTCTTGACTGC
GGGGAGATCGAGAGTAGAATTGGTCCAAATTCTTAAATCTACGAAGACAC
GAAAAAAAAAAAAACTCTGGATCGTACATGTGGCGATTTTTTCTCTTCCA
AGGCCCTTGTTGTCAGAGTGAAAAATTGACCACCTTGCTGAGATGAAGCT
CTGCGGTTGCTTCACTGCGTGCCAGTATCCCGAAGCCCAGGAAGACTATC
TGTGAAGGAACCTCACTCAAGCGAAACGAAGGCCGGATCCCAACGCGAAT
TGACCCTCCAACTCTATCCCGTCATGACCAAAATACCTTCGTTCTCTTCC
GTAGTCTGTTTGATTCGAAGATGGCAATAGGTGAGTATTGAGCTCGGAAC
GCGCAGAAATTGATGCCGTAGTTTTACGGCCGTAAAAAATTCGCAGAAAA
ACACTTTCCTTGTTGGTTGGAACGTATGAATCCGAAGATGAAAAACGCGT
CCTCTTGATAAGTCGTGAGGTTCCACCTCTCGGTTGAAGTAAGTACCTCC
GATCGGGTATTGAGCCACGTCCCATCATCCTCATCATACCATTCATTTGT
ACCTTGTCCTTGAAGAAACTCGCGTGTGATCACGGCACGTGATGCCTGTC
TGAAGAGCAAATGCGTCATTTCGTGCCGTGTACCTACGTTGCGTACGTGG
TGTCGTCATCGCCTTCTGTTGACATGGTCGTCGTCTTTCCAGGGCGGCCT
TCAACCGTCTGCGTCTGCGACCTCGCATCCTCCGAGATGTGAGCAAGGTG
GACACTACCACGTACGTCCTGGGTGAGAAGGTCGCCTCTCCCATTTGCAT
CGCCCCCACCGGTGAGGAAGAAGACCTGCTTGGTTTTATGAATGAGAGAC
GGGCGGGCGGGGCGTGTATCTGTGGAAATTAGGGTGTCCTTGGTTTGTAA
GGATCCTTCAACATGGCGCCCTTGCATTTTCGACTCCTTCTTACGTAATT
TTGCCTGTGAGGGATGTATGTGTATCTGGACACCCAGTTTTTTTGTGGGT
CAACGGCCAGTTCTAGCGATATTTTTTTCTGGGAGAAAACTACGAAATTC
CGAAAATTGGGGGGGGATATTGCCAGAGCGTTGTGGGCAGCCGGAATTCA
CCGGAATTTCAACCCTCCAAACGCCGTGAAAGAACCACTTTGTGGCGAAA
TCAATGGAATCGACTCTCTGGAAATATTGGCTCATGTGTGCTCCACAAAA
CCCCCAGCTTTCGCCATACAACGTAACCCCCATGACCTGGTCGATGGAAC
TTAGGGTTCACATTTGTCATGTCCTGCTTGGCACCGTGAAGAATGGGTAA
AACAATGAGCGTCCATCGGCAATTGAGCATGTGATGGGAATGCTGTCGGG
GGTCATGGTTTTCATGTCCGTGATGCGTACATGCGAATGATCACGTCATG
CTACTCCCTGGAATGCACAACGGTTGGATTATAGACAGCAAATCGCACCT
CCCCTTTGATTTGTTTGTCGATTGTCATTTGCGTGCTTTGCTGCACTTAC
TCGACTGTTCCGAAAATTATTCCTCATCCAAGATCGCGCTGATAGAGAAC
AAACCTCCTGTCCTCCCGAAGATGCGTTGTCAATCTTGTTACTCCAGGAT
GAAAGACACAAAAAAAAGTCCCGTTTTTGCAACCCCCTGCCGCTTCCGCC
GCGTGCGCGCAGCTATGCAGCGCATGGCTCATGACACGGGCGAGTGCGCC
ACCGCCGCCGCTGCCGCGAAGAGCGGAACGCTCATGACCCTCAGCTCGTG
GTCGACGACGGCCCTCGAGGACGTGGCCAAAGCTGGCGGGCCTGGCGGGG
CGCGCTGGTTCCAGCTATACGTGTACAAGGTACGATGGTGGACTATTGGG
GGGCTCATTTTTTTTGGTTCAAAACATGAGGGCAAAACTTTTTGATTGCT
ACTGTTGCCGATAGCATTGAAATATATATATATATATATATACCGACGCT
AGTTTTAGGTACACCAGTAGCCTGTATCTATTTTGAACCCCTTGGTAATC
GCCACGACCATGTTTTTTCATCACTATAGTGACATTTGGTGGATATTTGT
TGAAGTGGTTTGGTGCGGCGGTGGTGGTAGCGTTGGTGGCGGAAGTGGTG
ATCGCGCTTTGAGAAACTTGTGTCATGTAATTTCTCCAGCTTTGCCTGTA
TCCCACACGACGCTACTCGTGTGCACGATGCGAGAGAACTGTCTCGTTTG
TCTTGTCATTTTCTAGCATCCTGATCCCCCGTAACCCTCACTCTTCTGAA
GTCGGTAGTCGCGAGACAATGCCGCGCATGGCGAGTTCACATCATAATTT
TCTAACGTTCCACCGTTTGACGATGCTTTTCGGGCGACCCACGGTTACTG
CCGGGGTGTCAGCGTGGTATTGAAAAAAAAGATCATTTAGAAAGGACTTG
ATGGGAGAGTCATCAACCACGGATGGACCAATCGCGTCAGGGTCGAGAAA
ACAGCGGCGAATTCTTTAGTGCATTTTCTTAAGAAAGTTTTCTTCACGAT
GCTCGTTTTATCTTGATATTAGTGAGGCGATGGCTACATCGACTCGTGGC
GCTCCCACACCAAGTACAGATCTGATAATTGGGTCCGGAACAACGGCAAA
GGTTTCACCGCGATGACGAGCATCATACCGTTCAAAGACGTATAGTTCAC
ACAAGCTCAGTTTTTTTGTCGACTGCATAACCCAATTCCCTTCTCTTGTT
GATTCAATGTTGCCGGTTCAACGTGTACAACTCGAGATATATGTCGGCAT
CATAACCCCCCACTCTCGGTCCACTTCAGTTATAATATATCCAATCTCGC
CCCCCCCCGCCCATTATCCTCCCTTGAACATTCCCTGCCAAACCCATGTT
CGTTTGGTGGTGTGTGGAATCCCTACTTCAACCCGACCCCTTGTGCATAA
CAGGACCGTGTGATCACGACGCAGCTCGTAAAAAGGGCCCTCGCGGCAGG
CTACACTGCCCTGGCGGTTACCGTGGACACGCCCGTCCTCGGCAGGCGAG
AGGCTGACATGCGCAACCGTTTTAAGCTCCCGGAGCACCTTACCATGGGG
AATTTCGTCTCCGCCGGCGGCGCGCATGCGGAGGGGACGAAGGACGGCGG
GAACGACTCG
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Coding sequence (CDS) from alignment at H-paniculata_contig6590:7014..12123+

>mRNA_H-paniculata_contig6590.14463.1 ID=mRNA_H-paniculata_contig6590.14463.1|Name=mRNA_H-paniculata_contig6590.14463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at H-paniculata_contig6590:7014..12123+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGATGGGACCCAGTAAACGTCCGGGAGTTCGAGCGTCATGCCCAACTGAT
GCTGTCGAAGAATGCTTTTGACTACTACGCCAGCGGGGCCAACGACATGG
TCACGCTCAGGGAAAACAGGGATGGGACCCAGTAAACGTCCGGGAGTTCG
AGCGTCATGCCCAACTGATGCTGTCGAAGAATGCTTTTGACTACTACGCC
AGCGGGGCCAACGACATGGTCACGCTCAGGGAAAACAGGGCGGCCTTCAA
CCGTCTGCGTCTGCGACCTCGCATCCTCCGAGATGTGAGCAAGGTGGACA
CTACCACGTACGTCCTGGGTGAGAAGGTCGCCTCTCCCATTTGCATCGCC
CCCACCGGGCGGCCTTCAACCGTCTGCGTCTGCGACCTCGCATCCTCCGA
GATGTGAGCAAGGTGGACACTACCACGTACGTCCTGGGTGAGAAGGTCGC
CTCTCCCATTTGCATCGCCCCCACCGCTATGCAGCGCATGGCTCATGACA
CGGGCGAGTGCGCCACCGCCGCCGCTGCCGCGAAGAGCGGAACGCTCATG
ACCCTCAGCTCGTGGTCGACGACGGCCCTCGAGGACGTGGCCAAAGCTGG
CGGGCCTGGCGGGGCGCGCTGGTTCCAGCTATACGTGTACAAGCTATGCA
GCGCATGGCTCATGACACGGGCGAGTGCGCCACCGCCGCCGCTGCCGCGA
AGAGCGGAACGCTCATGACCCTCAGCTCGTGGTCGACGACGGCCCTCGAG
GACGTGGCCAAAGCTGGCGGGCCTGGCGGGGCGCGCTGGTTCCAGCTATA
CGTGTACAAGGACCGTGTGATCACGACGCAGCTCGTAAAAAGGGCCCTCG
CGGCAGGCTACACTGCCCTGGCGGTTACCGTGGACACGCCCGTCCTCGGC
AGGCGAGAGGCTGACATGCGCAACCGTTTTAAGCTCCCGGAGCACCTTAC
CATGGGGAATTTCGTCTCCGCCGGCGGCGCGCATGCGGAGGGGACGAAGG
ACGGCGGGAACGACTCGGACCGTGTGATCACGACGCAGCTCGTAAAAAGG
GCCCTCGCGGCAGGCTACACTGCCCTGGCGGTTACCGTGGACACGCCCGT
CCTCGGCAGGCGAGAGGCTGACATGCGCAACCGTTTTAAGCTCCCGGAGC
ACCTTACCATGGGGAATTTCGTCTCCGCCGGCGGCGCGCATGCGGAGGGG
ACGAAGGACGGCGGGAACGACTCG
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