prot_H-paniculata_contig65880.14457.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig65880.14457.1
Unique Nameprot_H-paniculata_contig65880.14457.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
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BLAST of mRNA_H-paniculata_contig65880.14457.1 vs. uniprot
Match: A0A6H5JL12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL12_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 2.550e-5
Identity = 35/99 (35.35%), Postives = 53/99 (53.54%), Query Frame = 0 
Query:    5 CRNFSTLHVRVAIDTPRRLWATSADQPSHSTSG-RARQCRLRVS-RVPLLRARAVTWTRSASAEFMSMDSYLLANVEYVKFGIRFNRSLEGVVWPPRVR 101
            CR  +  H R+A  TPRRLW   + +    T G R R   L  S R+P  R  +VTW ++     +     +L+ +E +++G  FN  L+ VVWPP+V+
Sbjct:   72 CRTVAGCHARIARGTPRRLWCPLSTR--RITRGQRRRSGSLDGSPRLPPRRLTSVTWEKTIRE--LGQAQEVLSELENLEWGRMFNERLDAVVWPPKVK 166
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65880.14457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JL12_9PHAE2.550e-535.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig65880contigH-paniculata_contig65880:420..800 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig65880.14457.1mRNA_H-paniculata_contig65880.14457.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig65880 411..800 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig65880.14457.1 ID=prot_H-paniculata_contig65880.14457.1|Name=mRNA_H-paniculata_contig65880.14457.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
MCMMCRNFSTLHVRVAIDTPRRLWATSADQPSHSTSGRARQCRLRVSRVP
LLRARAVTWTRSASAEFMSMDSYLLANVEYVKFGIRFNRSLEGVVWPPRV
RRILFDGNIGRCTSMFNQPIDEVVWPS
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