prot_H-paniculata_contig65480.14403.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig65480.14403.1
Unique Nameprot_H-paniculata_contig65480.14403.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length43
Homology
BLAST of mRNA_H-paniculata_contig65480.14403.1 vs. uniprot
Match: A0A6H5K6Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y8_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.850e-13
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    2 FTYLVIVLWLGTTVFWLVRMNRALAMFHGLFIIPALQV 39
            FTYLV  +WLGTT+FWLVRMNRALAMFHGLFIIPALQV
Sbjct:  472 FTYLVFAIWLGTTIFWLVRMNRALAMFHGLFIIPALQV 509          
BLAST of mRNA_H-paniculata_contig65480.14403.1 vs. uniprot
Match: D7G9H4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H4_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 6.450e-13
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    2 FTYLVIVLWLGTTVFWLVRMNRALAMFHGLFIIPALQV 39
            FTYLV  +WLGTT+FWLVRMN+ALAMFHGLFIIPALQV
Sbjct:  475 FTYLVFAIWLGTTIFWLVRMNQALAMFHGLFIIPALQV 512          
BLAST of mRNA_H-paniculata_contig65480.14403.1 vs. uniprot
Match: A0A7S2D151_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D151_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.320e-8
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    2 FTYLVIVLWLGTTVFWLVRMNRALAMFHGLFIIPALQV 39
            FTY  +VLWL TT FWL RMN+ALA+F  LFIIP LQV
Sbjct:   33 FTYFTLVLWLSTTAFWLYRMNKALALFDPLFIIPVLQV 70          
BLAST of mRNA_H-paniculata_contig65480.14403.1 vs. uniprot
Match: A0A7S2XXT4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXT4_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 6.620e-8
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    2 FTYLVIVLWLGTTVFWLVRMNRALAMFHGLFIIPALQV 39
            F Y+++V W+ T VFWL RMNRALA+F+GLFIIP LQV
Sbjct:   70 FFYIILVFWIITAVFWLYRMNRALALFNGLFIIPVLQV 107          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65480.14403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K6Y8_9PHAE1.850e-1389.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9H4_ECTSI6.450e-1386.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2D151_9STRA2.320e-871.05Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2XXT4_9STRA6.620e-868.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..41
NoneNo IPR availableTMHMMTMhelixcoord: 2..19
NoneNo IPR availableTMHMMTMhelixcoord: 24..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig65480contigH-paniculata_contig65480:515..643 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig65480.14403.1mRNA_H-paniculata_contig65480.14403.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig65480 515..643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig65480.14403.1 ID=prot_H-paniculata_contig65480.14403.1|Name=mRNA_H-paniculata_contig65480.14403.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=43bp
PFTYLVIVLWLGTTVFWLVRMNRALAMFHGLFIIPALQVLLS*
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