prot_H-paniculata_contig65476.14401.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig65476.14401.1
Unique Nameprot_H-paniculata_contig65476.14401.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length121
Homology
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Match: E6ZET4_ECTSI (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZET4_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 1.700e-79
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0
Query:    1 MFFLKEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120
            MFFLKEYYP LIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE
Sbjct:    1 MFFLKEYYPVLIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Match: A0A0U1XDC4_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Phaeophyceae TaxID=2870 RepID=A0A0U1XDC4_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 2.230e-75
Identity = 111/120 (92.50%), Postives = 118/120 (98.33%), Query Frame = 0
Query:    1 MFFLKEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120
            MFFLKEYYPALIFLGFSL LA +IFGAS+ILA+SD+D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPW+VSLSQLPSIGYWSM+DFLFELVVGFIYAWQIGSLDWE
Sbjct:    1 MFFLKEYYPALIFLGFSLFLAALIFGASYILAISDSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Match: Q94YZ1_PYLLI (NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ectocarpales TaxID=2877 RepID=Q94YZ1_PYLLI)

HSP 1 Score: 221 bits (563), Expect = 8.750e-73
Identity = 109/120 (90.83%), Postives = 114/120 (95.00%), Query Frame = 0
Query:    1 MFFLKEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120
            MF LKEYYPALIFL FS  LA +IFGAS+ILAVS AD+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPW+VSLSQLPSIGYWSM+DFLFELVVGFIYAWQIGSLDWE
Sbjct:    1 MFLLKEYYPALIFLVFSFVLAAIIFGASYILAVSSADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAVSLSQLPSIGYWSMMDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Match: A0A0U1WNN7_SARFS (NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1WNN7_SARFS)

HSP 1 Score: 207 bits (528), Expect = 1.900e-67
Identity = 99/120 (82.50%), Postives = 112/120 (93.33%), Query Frame = 0
Query:    1 MFFLKEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120
            MFFL+EY PALI+L FSL LA VIFGAS+ LA++++D EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+F+FPW+ SLSQLP +GYWS++DFLFELVVGFIYAWQIGSLDWE
Sbjct:    1 MFFLREYSPALIYLCFSLILASVIFGASYTLALAESDNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFIFPWAASLSQLPPVGYWSVIDFLFELVVGFIYAWQIGSLDWE 120          
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Match: A0A4Y5T7V9_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7V9_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 7.440e-65
Identity = 95/120 (79.17%), Postives = 112/120 (93.33%), Query Frame = 0
Query:    1 MFFLKEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120
            MF+L EYY  LIFL  S+ LA +IFGAS++LA+S++D+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+F+FPW++SLSQ+PSIGYWSM+DFLFELVVGFIYAW+IGSL+W 
Sbjct:    1 MFYLHEYYSILIFLVISVLLAFIIFGASYLLALSNSDSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAISLSQMPSIGYWSMMDFLFELVVGFIYAWKIGSLEWS 120          
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Match: Q2TU99_DICDH (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TU99_DICDH)

HSP 1 Score: 200 bits (508), Expect = 2.070e-64
Identity = 95/119 (79.83%), Postives = 109/119 (91.60%), Query Frame = 0
Query:    1 MFFLKEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDW 119
            MF+L EYYP L+F   S+ LA +IFG S+ILA S AD+EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+F+FPW+VSLSQLPS+GYWSM+DFLFEL+VGFIYAW+IGSL+W
Sbjct:    1 MFYLHEYYPVLLFFLISILLAFLIFGLSYILAFSKADSEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFVFPWAVSLSQLPSVGYWSMMDFLFELIVGFIYAWKIGSLEW 119          
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Match: A0A8F0K0X7_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K0X7_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 4.000e-62
Identity = 94/119 (78.99%), Postives = 103/119 (86.55%), Query Frame = 0
Query:    1 MFFLKEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDW 119
            MF   EYYP L+FL     LA +IFGAS+ L  S AD EKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPW+++LSQLPS+GYWSM+DFL ELVVGFIYAWQIGSL+W
Sbjct:    1 MFCFHEYYPVLLFLVVGFILAVIIFGASYFLVFSKADNEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWAITLSQLPSLGYWSMMDFLLELVVGFIYAWQIGSLEW 119          
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Match: A0A8E8U4L6_9PHAE (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4L6_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 4.820e-61
Identity = 88/117 (75.21%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    4 LKEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120
            L EYYP L+F+ FSL L+ +IFGAS+  ++++ D EK+SSYECGFDPYEDARNAFDVRFYLVAILFLLFDIET+FLFPW V+LS+LP++GYWSM+DF+ ELV+GFIYAWQIGSLDWE
Sbjct:    4 LPEYYPILLFITFSLFLSLLIFGASYTFSIAEPDNEKVSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETVFLFPWVVTLSELPAVGYWSMVDFIIELVIGFIYAWQIGSLDWE 120          
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Match: A0A7S6UA31_9STRA (NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA31_9STRA)

HSP 1 Score: 183 bits (465), Expect = 8.420e-58
Identity = 87/117 (74.36%), Postives = 102/117 (87.18%), Query Frame = 0
Query:    5 KEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLP-SIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120
            +EYYP L+F   S+ LAG+IFGAS+ LA++  DTEKLSSYECGFDPYEDARNAFDVRFYLVAILFL+FD+E +FLFPW+V L Q   S+G WSM+DFLFEL+VGF+YAWQIGSLDWE
Sbjct:    7 QEYYPILVFTFLSIGLAGLIFGASYALALAKPDTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLIFDLEAVFLFPWAVGLGQQSTSLGLWSMIDFLFELLVGFVYAWQIGSLDWE 123          
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Match: D2Z252_HETAK (NADH-ubiquinone oxidoreductase chain 3 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=D2Z252_HETAK)

HSP 1 Score: 180 bits (456), Expect = 1.920e-56
Identity = 79/118 (66.95%), Postives = 104/118 (88.14%), Query Frame = 0
Query:    3 FLKEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDPYEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDFLFELVVGFIYAWQIGSLDWE 120
            F++EY P LIFLG S+ L+GVIFG S++LA+   DTEKLS YECGFDPYEDAR AFDVRFYLVAILF++FD+E ++LFPW++SL+Q+ S+G+W+MLDFL EL +GF+YAW++G+L+WE
Sbjct:    5 FIQEYSPVLIFLGISIVLSGVIFGLSYVLAIHKPDTEKLSPYECGFDPYEDARQAFDVRFYLVAILFIIFDLEAMYLFPWAISLNQIGSMGFWTMLDFLVELGIGFVYAWRVGALEWE 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65476.14401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E6ZET4_ECTSI1.700e-7999.17NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Ect... [more]
A0A0U1XDC4_9PHAE2.230e-7592.50NADH-ubiquinone oxidoreductase chain 3 n=66 Tax=Ph... [more]
Q94YZ1_PYLLI8.750e-7390.83NADH-ubiquinone oxidoreductase chain 3 n=3 Tax=Ect... [more]
A0A0U1WNN7_SARFS1.900e-6782.50NADH-ubiquinone oxidoreductase chain 3 n=22 Tax=Sa... [more]
A0A4Y5T7V9_9PHAE7.440e-6579.17NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dic... [more]
Q2TU99_DICDH2.070e-6479.83NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Dic... [more]
A0A8F0K0X7_9PHAE4.000e-6278.99NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Pro... [more]
A0A8E8U4L6_9PHAE4.820e-6175.21NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Pha... [more]
A0A7S6UA31_9STRA8.420e-5874.36NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Sch... [more]
D2Z252_HETAK1.920e-5666.95NADH-ubiquinone oxidoreductase chain 3 n=2 Tax=Het... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyGENE3D1.20.58.1610coord: 2..120
e-value: 2.6E-37
score: 129.5
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PFAMPF00507Oxidored_q4coord: 23..119
e-value: 1.1E-33
score: 115.4
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3PANTHERPTHR11058NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3coord: 4..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..59
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidHAMAPMF_01394NDH1_NuoAcoord: 3..120
score: 17.499

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig65476contigH-paniculata_contig65476:433..795 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig65476.14401.1mRNA_H-paniculata_contig65476.14401.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig65476 149..795 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig65476.14401.1 ID=prot_H-paniculata_contig65476.14401.1|Name=mRNA_H-paniculata_contig65476.14401.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp
MFFLKEYYPALIFLGFSLALAGVIFGASFILAVSDADTEKLSSYECGFDP
YEDARNAFDVRFYLVAILFLLFDIETIFLFPWSVSLSQLPSIGYWSMLDF
LFELVVGFIYAWQIGSLDWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038430NDAH_ubi_oxred_su3_sf
IPR000440NADH_UbQ/plastoQ_OxRdtase_su3
IPR023043NAD(P)H_OxRDtase_bac/plastid