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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1881 |
| Cds size | 1692 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6545.14399.1 >prot_H-paniculata_contig6545.14399.1 ID=prot_H-paniculata_contig6545.14399.1|Name=mRNA_H-paniculata_contig6545.14399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=564bp
MAEFGLRQKFLADSGPRLLSHDDPEQLLIYPFDSAPPSFQFRSHVAGITL
ANEHLILVTNSMNDYNATVLISRKYGHASGAWIGGELDEGLEVIASPGAF
PRGLCLSEACSWSIPPLNKSCEGFPPSPLVFMLTTVGKLECYVVVNPKNA
SAGKRRSSVRAALSPEVVEPKEGYREEEGEDGGGSAQTTSGDAASAQSRG
GDNARAGNDGAGVSDGAKPLFAAAPAAAAATTAGGIFGGGVSGPLTFGAG
KLADPTDKSKKAGGSGTGFSWAARSGAKPSFGFSAAPALGKTGASAPVSS
PSGSKSSFGGSGSSTSSATTPIAGSKSSFGVFRSSASSAPTPSSTSKPSF
GIFGSSTSSATTPSSTSKPSFGTFGSSTRSGSGFGSFGLSASGGTSVGIF
GNKAALPPPGEEKETKKGAVGGIPSQFKSSAAAEAEFKPTEKSPTGRVPS
MFGTTATPSAKASAPALASKASGYPPMSIKPPQIFGGDATPAAKASAPAP
ASKASSYPPMSIKPPQIFGGDATPAAKASAPAPTPKASGYPPMSIKPPQI
FGGDATPAAKASAP back to topmRNA from alignment at H-paniculata_contig6545:7858..10798- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6545.14399.1 ID=mRNA_H-paniculata_contig6545.14399.1|Name=mRNA_H-paniculata_contig6545.14399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2941bp|location=Sequence derived from alignment at H-paniculata_contig6545:7858..10798- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCAAGAGAACGGTCATACTCCAAATCACCCCGCCTATTGTCGGGCGACC
TGATGAGCTCCAAAAACTTTGCTGCATCGATGTACTCTTTACAATACAAG
CAACCAATCGACGAACCGGCCCGGTTTTCCGCCCTCTTGTCATGATTGTC
ATTATCAACATCAATGTTTGTCTCAGGTCGCAGCCAAGATGGCGGAGTTC
GGCCTGCGGCAGAAATTTTTGGCGGACTCGGGCCCGAGGCTGCTTTCCCA
CGACGACCCTGAACAACTGCTGATATATCCTTTTGATAGCGCTCCGCCCT
CGTTCCAGTTTCGAAGCCATGTGGCGGTGGGTGCACCCCCTTGCGTTTGT
TCCCTCTTGTCGATCTTGAAATAATTTTTTTTCGTTCACACAGGGGCGCT
TGTTGACCATTCGACGGGCGAAATACGACGCTGGCCGCAGCGATCCCCAC
GTTTGAATTTAAGCCTGAAGGCTTTCAGGGACAAGAATCAACCTGCTTTA
CAAAAGTGCATGTGTTTGACTGTGATTTATTTCCATGTTTGACCCCTTCT
CTTGTGTACTGATATCTTGCTGCTCTTGATCTGGCGACATTCCAATGCCT
TTTGGGTTTAATTTTGCTAATAAGTGTATGGAAACTGAAACTTTAGGTCA
GCCGCATAAACCTTAACACGGGTGCGATAGAGTCATTACATGAGCGTTAT
GGTTCTACTGGCTGTCGCCAAGTAGGTTGACTTACGGCTGAGACTCTTTG
AGGGTGAGTGAGATTTTTTTTTTTTTTGTGTGTCCTTCGTTCATGTAGAC
GCTATTTCGTGTTTACGTACAGTTACACACTCGAGTGACAAAGTGATGCA
TGCTTGTAAATGTCGAAGCCCATGTCGTACGTGGTTGAAGAGGTTGAAGA
GGTGTGAGAAAATCAACCTTCCCCGCTCTCACCCCACGCGCTCTTTCGCA
TTCGTTTCGCAACCGATACAGGGGATCACGCTAGCGAACGAACACTTGAT
TTTGGTCACCAACAGCATGAACGACTACAATGCTACAGTCTTGATCTCGA
GAAAATATGGCCATGCTAGCGGTGCGTGGATCGGTGGCGAGCTAGATGAG
GGGTTGGAAGTGATCGCATCGCCTGGTACGTATGAACCGCGTGAAGACGG
GATGACGGAAAGGGGCAAGTGAAGAGGTAGTCATGGTAAGCACGGCTTTG
ACTTAAGGCCATCAAGGGATCATCAGTCACCAGGATTCTCCCAGAGATGA
AGTAGCCATACGTGAAGGGCAGAACGGATGGGGGTGCACATAGACGTTTG
CGTTGCAATAAATGGAGAAAAATCTAAATGAGTAACGGACTGCGTTCACT
CTGGATGATGATATATCCCTTAATCAGGTCCGATGTTCGCTCGGATATTC
CCATTGGCCAAGGTCCCGCCGCAATCCCTTTCGTTTCTGACCACTTACCC
CTCCCGTCTACACTCCTCTGCGCCCCTCTACACCCATCTACCCCCTTTCA
ATCCCATGTGCCTGCTGCTACCAAAACTCTGTTCTTTGTAGGGGCGTTTC
CCCGCGGCCTGTGCCTCTCGGAGGCTTGCTCGTGGTCGATTCCCCCGTTA
AATAAGAGCTGCGAAGGGTTTCCACCATCTCCATTAGTGTTTATGTTGAC
CACTGTTGGGAAGCTCGAGTGCTACGTGGTAGTAAACCCGAAGAACGCGA
GCGCCGGAAAACGCCGGTCCTCAGTGCGCGCAGCGCTGTCCCCGGAGGTT
GTTGAACCGAAGGAGGGTTACCGGGAGGAAGAGGGGGAGGACGGCGGTGG
CAGCGCGCAAACGACCTCGGGTGATGCTGCGAGCGCACAGTCACGTGGAG
GGGACAACGCCAGAGCTGGAAATGATGGCGCCGGCGTGTCAGACGGCGCA
AAACCGCTGTTCGCTGCCGCGCCTGCCGCCGCCGCCGCGACCACAGCTGG
CGGTATTTTCGGGGGTGGGGTCAGTGGGCCGCTCACATTCGGAGCCGGGA
AACTAGCAGACCCCACAGATAAGTCCAAGAAGGCCGGAGGCTCTGGGACG
GGGTTCTCGTGGGCCGCGAGGTCGGGAGCGAAGCCTTCATTCGGCTTTTC
TGCCGCGCCCGCGCTTGGAAAGACCGGCGCGTCGGCCCCGGTGTCTTCGC
CTTCCGGGTCGAAGTCATCTTTTGGAGGCTCTGGGTCTTCGACGAGTTCG
GCAACAACACCGATCGCCGGGTCGAAGTCGTCTTTTGGAGTCTTCAGGTC
TTCAGCGAGTTCGGCACCAACGCCGTCATCCACATCGAAGCCATCTTTTG
GAATCTTCGGGTCTTCGACTAGTTCAGCAACGACGCCGTCATCCACATCG
AAGCCATCTTTTGGGACCTTTGGATCCTCGACTCGTTCAGGTTCAGGTTT
CGGGTCGTTCGGTTTGTCGGCGTCGGGAGGGACGTCGGTTGGTATTTTCG
GTAACAAGGCGGCACTGCCGCCGCCAGGAGAAGAGAAAGAAACGAAAAAA
GGCGCTGTCGGAGGCATCCCGAGTCAGTTCAAATCCTCCGCCGCTGCTGA
GGCTGAATTTAAACCAACCGAGAAGTCGCCCACCGGGAGGGTTCCATCAA
TGTTTGGCACAACAGCAACACCCTCAGCAAAAGCGTCAGCTCCGGCGCTG
GCCTCCAAGGCCTCGGGCTACCCGCCGATGAGCATCAAGCCTCCGCAGAT
ATTCGGGGGGGACGCAACGCCCGCAGCCAAAGCGTCAGCTCCGGCGCCGG
CCTCCAAGGCTTCGAGCTACCCGCCGATGAGCATCAAGCCTCCGCAGATA
TTCGGGGGGGATGCAACGCCCGCAGCGAAAGCGTCAGCTCCGGCGCCGAC
CCCCAAGGCCTCGGGCTACCCGCCGATGAGCATCAAGCCTCCGCAGATAT
TCGGGGGGGATGCAACGCCCGCAGCGAAAGCGTCAGCTCCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig6545:7858..10798- >mRNA_H-paniculata_contig6545.14399.1 ID=mRNA_H-paniculata_contig6545.14399.1|Name=mRNA_H-paniculata_contig6545.14399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3384bp|location=Sequence derived from alignment at H-paniculata_contig6545:7858..10798- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGAGTTCGGCCTGCGGCAGAAATTTTTGGCGGACTCGGGCCCGAG
GCTGCTTTCCCACGACGACCCTGAACAACTGCTGATATATCCTTTTGATA
GCGCTCCGCCCTCGTTCCAGTTTCGAAGCCATGTGGCGATGGCGGAGTTC
GGCCTGCGGCAGAAATTTTTGGCGGACTCGGGCCCGAGGCTGCTTTCCCA
CGACGACCCTGAACAACTGCTGATATATCCTTTTGATAGCGCTCCGCCCT
CGTTCCAGTTTCGAAGCCATGTGGCGGGGATCACGCTAGCGAACGAACAC
TTGATTTTGGTCACCAACAGCATGAACGACTACAATGCTACAGTCTTGAT
CTCGAGAAAATATGGCCATGCTAGCGGTGCGTGGATCGGTGGCGAGCTAG
ATGAGGGGTTGGAAGTGATCGCATCGCCTGGGGATCACGCTAGCGAACGA
ACACTTGATTTTGGTCACCAACAGCATGAACGACTACAATGCTACAGTCT
TGATCTCGAGAAAATATGGCCATGCTAGCGGTGCGTGGATCGGTGGCGAG
CTAGATGAGGGGTTGGAAGTGATCGCATCGCCTGGGGCGTTTCCCCGCGG
CCTGTGCCTCTCGGAGGCTTGCTCGTGGTCGATTCCCCCGTTAAATAAGA
GCTGCGAAGGGTTTCCACCATCTCCATTAGTGTTTATGTTGACCACTGTT
GGGAAGCTCGAGTGCTACGTGGTAGTAAACCCGAAGAACGCGAGCGCCGG
AAAACGCCGGTCCTCAGTGCGCGCAGCGCTGTCCCCGGAGGTTGTTGAAC
CGAAGGAGGGTTACCGGGAGGAAGAGGGGGAGGACGGCGGTGGCAGCGCG
CAAACGACCTCGGGTGATGCTGCGAGCGCACAGTCACGTGGAGGGGACAA
CGCCAGAGCTGGAAATGATGGCGCCGGCGTGTCAGACGGCGCAAAACCGC
TGTTCGCTGCCGCGCCTGCCGCCGCCGCCGCGACCACAGCTGGCGGTATT
TTCGGGGGTGGGGTCAGTGGGCCGCTCACATTCGGAGCCGGGAAACTAGC
AGACCCCACAGATAAGTCCAAGAAGGCCGGAGGCTCTGGGACGGGGTTCT
CGTGGGCCGCGAGGTCGGGAGCGAAGCCTTCATTCGGCTTTTCTGCCGCG
CCCGCGCTTGGAAAGACCGGCGCGTCGGCCCCGGTGTCTTCGCCTTCCGG
GTCGAAGTCATCTTTTGGAGGCTCTGGGTCTTCGACGAGTTCGGCAACAA
CACCGATCGCCGGGTCGAAGTCGTCTTTTGGAGTCTTCAGGTCTTCAGCG
AGTTCGGCACCAACGCCGTCATCCACATCGAAGCCATCTTTTGGAATCTT
CGGGTCTTCGACTAGTTCAGCAACGACGCCGTCATCCACATCGAAGCCAT
CTTTTGGGACCTTTGGATCCTCGACTCGTTCAGGTTCAGGTTTCGGGTCG
TTCGGTTTGTCGGCGTCGGGAGGGACGTCGGTTGGTATTTTCGGTAACAA
GGCGGCACTGCCGCCGCCAGGAGAAGAGAAAGAAACGAAAAAAGGCGCTG
TCGGAGGCATCCCGAGTCAGTTCAAATCCTCCGCCGCTGCTGAGGCTGAA
TTTAAACCAACCGAGAAGTCGCCCACCGGGAGGGTTCCATCAATGTTTGG
CACAACAGCAACACCCTCAGCAAAAGCGTCAGCTCCGGCGCTGGCCTCCA
AGGCCTCGGGCTACCCGCCGATGAGCATCAAGCCTCCGCAGATATTCGGG
GGGGACGCAACGCCCGCAGCCAAAGCGTCAGCTCCGGCGCCGGCCTCCAA
GGCTTCGAGCTACCCGCCGATGAGCATCAAGCCTCCGCAGATATTCGGGG
GGGATGCAACGCCCGCAGCGAAAGCGTCAGCTCCGGCGCCGACCCCCAAG
GCCTCGGGCTACCCGCCGATGAGCATCAAGCCTCCGCAGATATTCGGGGG
GGATGCAACGCCCGCAGCGAAAGCGTCAGCTCCGGGGCGTTTCCCCGCGG
CCTGTGCCTCTCGGAGGCTTGCTCGTGGTCGATTCCCCCGTTAAATAAGA
GCTGCGAAGGGTTTCCACCATCTCCATTAGTGTTTATGTTGACCACTGTT
GGGAAGCTCGAGTGCTACGTGGTAGTAAACCCGAAGAACGCGAGCGCCGG
AAAACGCCGGTCCTCAGTGCGCGCAGCGCTGTCCCCGGAGGTTGTTGAAC
CGAAGGAGGGTTACCGGGAGGAAGAGGGGGAGGACGGCGGTGGCAGCGCG
CAAACGACCTCGGGTGATGCTGCGAGCGCACAGTCACGTGGAGGGGACAA
CGCCAGAGCTGGAAATGATGGCGCCGGCGTGTCAGACGGCGCAAAACCGC
TGTTCGCTGCCGCGCCTGCCGCCGCCGCCGCGACCACAGCTGGCGGTATT
TTCGGGGGTGGGGTCAGTGGGCCGCTCACATTCGGAGCCGGGAAACTAGC
AGACCCCACAGATAAGTCCAAGAAGGCCGGAGGCTCTGGGACGGGGTTCT
CGTGGGCCGCGAGGTCGGGAGCGAAGCCTTCATTCGGCTTTTCTGCCGCG
CCCGCGCTTGGAAAGACCGGCGCGTCGGCCCCGGTGTCTTCGCCTTCCGG
GTCGAAGTCATCTTTTGGAGGCTCTGGGTCTTCGACGAGTTCGGCAACAA
CACCGATCGCCGGGTCGAAGTCGTCTTTTGGAGTCTTCAGGTCTTCAGCG
AGTTCGGCACCAACGCCGTCATCCACATCGAAGCCATCTTTTGGAATCTT
CGGGTCTTCGACTAGTTCAGCAACGACGCCGTCATCCACATCGAAGCCAT
CTTTTGGGACCTTTGGATCCTCGACTCGTTCAGGTTCAGGTTTCGGGTCG
TTCGGTTTGTCGGCGTCGGGAGGGACGTCGGTTGGTATTTTCGGTAACAA
GGCGGCACTGCCGCCGCCAGGAGAAGAGAAAGAAACGAAAAAAGGCGCTG
TCGGAGGCATCCCGAGTCAGTTCAAATCCTCCGCCGCTGCTGAGGCTGAA
TTTAAACCAACCGAGAAGTCGCCCACCGGGAGGGTTCCATCAATGTTTGG
CACAACAGCAACACCCTCAGCAAAAGCGTCAGCTCCGGCGCTGGCCTCCA
AGGCCTCGGGCTACCCGCCGATGAGCATCAAGCCTCCGCAGATATTCGGG
GGGGACGCAACGCCCGCAGCCAAAGCGTCAGCTCCGGCGCCGGCCTCCAA
GGCTTCGAGCTACCCGCCGATGAGCATCAAGCCTCCGCAGATATTCGGGG
GGGATGCAACGCCCGCAGCGAAAGCGTCAGCTCCGGCGCCGACCCCCAAG
GCCTCGGGCTACCCGCCGATGAGCATCAAGCCTCCGCAGATATTCGGGGG
GGATGCAACGCCCGCAGCGAAAGCGTCAGCTCCG back to top
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