mRNA_H-paniculata_contig654.14394.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Match: A0A6H5K8K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K4_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 3.770e-15 Identity = 44/145 (30.34%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 4 DFGQAFLTVDIDIEMYIEVAEACQVFPRDVGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHAEPCAYRRNMDGELKKLVVAYVDDRLIASKGKEAKDPFVTELESRYKIQDLGEESYYMGCHISPNRDARELKLDQHLYVQT 438
D QA++ E++I + ++C + A+Y L Q+GR W + + L A G++ A+PC +RR +DGE+ L+V YVDD L+ + +E ++ + L+ ++ ++DLGE ++Y G I + + KL Q Y+++
Sbjct: 911 DIKQAYIHAKFKEEIFIRLPQSCGDMSGKACKVERALYGLKQSGREWGFEAADALIANGYEQCRADPCVFRRMVDGEVVGLIVIYVDDILLVASEQERQE-LLASLQKKFPVKDLGECTWYDGIGIEMDLENGITKLSQTAYIES 1054
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Match: UPI001A452E0F (uncharacterized protein n=3 Tax=Ustilago hordei TaxID=120017 RepID=UPI001A452E0F) HSP 1 Score: 80.9 bits (198), Expect = 9.590e-15 Identity = 45/139 (32.37%), Postives = 72/139 (51.80%), Query Frame = 1
Query: 16 AFLTVDIDIEMYIEVAEACQVFPRDVGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHAEPCAYRRNMDGELKKLVVAYVDDRLIASKGKEAKDPFVTELESRYKIQDLGEESYYMGCHISPNRDARELKLDQHLYV 432
A+L + +Y++ E V PR V + +Y L Q+GR W +FN L+ +GF + PC Y + GE +VV YVDD L+ + E ++ R+K++D GE S+++G IS N R + + Q Y+
Sbjct: 2 AYLNSRLKEVIYMKPLEGSGVAPRQVYKVVKGLYGLKQSGREWNQEFNRSLRCMGFFQVECAPCIYTKGQ-GEDMAIVVIYVDDTLVIAPWLETVLKVKKQIGQRWKMEDSGEVSHFLGIKISRNCTMRTMMIGQSGYI 139
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.290e-14 Identity = 43/143 (30.07%), Postives = 74/143 (51.75%), Query Frame = 1
Query: 4 DFGQAFLTVDIDIEMYIEVAEACQVFPRDVGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHAEPCAYRRNMDGELKKLVVAYVDDRLIASKGKEAKDPFVTELESRYKIQDLGEESYYMGCHISPNRDARELKLDQHLYV 432
D QA+ I E+Y+ +A+ V + A+Y L Q+GR W + N L G++ A+PC +R+ +DG++ ++V YVDD + +E ++ +T L ++DLGE ++Y GC I + + L Q Y+
Sbjct: 848 DIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYI 989
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.330e-14 Identity = 43/143 (30.07%), Postives = 74/143 (51.75%), Query Frame = 1
Query: 4 DFGQAFLTVDIDIEMYIEVAEACQVFPRDVGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHAEPCAYRRNMDGELKKLVVAYVDDRLIASKGKEAKDPFVTELESRYKIQDLGEESYYMGCHISPNRDARELKLDQHLYV 432
D QA+ I E+Y+ +A+ V + A+Y L Q+GR W + N L G++ A+PC +R+ +DG++ ++V YVDD + +E ++ +T L ++DLGE ++Y GC I + + L Q Y+
Sbjct: 1401 DIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYI 1542
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Match: UPI001A5F47C3 (uncharacterized protein n=1 Tax=Ustilago hordei TaxID=120017 RepID=UPI001A5F47C3) HSP 1 Score: 80.5 bits (197), Expect = 1.450e-14 Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 1
Query: 4 DFGQAFLTVDIDIEMYIEVAEACQVFPRDVGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHAEPCAYRRNMDGELKKLVVAYVDDRLIASKGKEAKDPFVTELESRYKIQDLGEESYYMGCHISPNRDARELKLDQHLYV 432
D A+L + +Y++ E V P V + +Y L Q+G+ W +FN L+ LGF + PC Y + GE +VV YVDD L+ + +E ++ R+K++D GE S+++G IS + R + + Q Y+
Sbjct: 54 DITMAYLNSTLKEAIYMKPPEGSGVAPGQVYKVVKGLYGLKQSGQEWNQEFNRSLQCLGFFQVECTPCIYTKGQ-GEDMAIVVIYVDDTLVIAPRQETVLKVKKQISQRWKMEDSGEVSHFLGIKISQDHVMRTMTIGQSGYI 195
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Match: A0A6L2JRI2_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2JRI2_TANCI) HSP 1 Score: 80.5 bits (197), Expect = 1.720e-14 Identity = 45/146 (30.82%), Postives = 81/146 (55.48%), Query Frame = 1
Query: 4 DFGQAFLTVDIDIEMYIEVAEACQVFPRD--VGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHAEPCAYRRNMDGELKKLVVAYVDDRLIASKGKEAKDPFVTELESRYKIQDLGEESYYMGCHISPNRDARELKLDQHLYVQ 435
D AFL +++ E+Y+ +E + ++ V L ++Y L QA RCWY +F++ +++LG+ LHA+PCAY + +++ YVD L+ K + +L +K++DLG + +G I +R +R++ L Q YV+
Sbjct: 461 DVKTAFLHGNLEEEIYMLRSEGFKQKRKENLVCRLNKSLYGLKQARRCWYKRFDSFIRSLGYNRLHADPCAYFKRFGNNDFIILLLYVDYMLVTGPNKYRINNLKAQLVREFKMKDLGPANKILGMQIYRDRVSRKIWLSQKSYVK 606
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Match: UPI001A627A53 (uncharacterized protein n=4 Tax=Ustilago hordei TaxID=120017 RepID=UPI001A627A53) HSP 1 Score: 80.5 bits (197), Expect = 1.770e-14 Identity = 47/156 (30.13%), Postives = 80/156 (51.28%), Query Frame = 1
Query: 4 DFGQAFLTVDIDIEMYIEVAEACQVFPRDVGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHAEPCAYRRNMDGELKKLVVAYVDDRLIASKGKEAKDPFVTELESRYKIQDLGEESYYMGCHISPNRDARELKLDQHLYV-QT*PSNLDRQAQ 468
D A+L + +Y++ E V P V + +Y L Q+GR W +F+ L+ +GF + PC Y + GE +VV YVDD L+ + E ++ R+K++D GE S+++G IS +R R + + Q Y+ Q +LD++ +
Sbjct: 955 DITMAYLNSTLKEAIYMKPPEGSGVAPGKVYKVVKGLYGLKQSGREWNQEFDRSLRRMGFFQVECAPCIYTKGQ-GEDMAIVVIYVDDTLVIAPRLETVLEVKKQISQRWKMEDSGEVSHFLGIKISRDRAMRTMTIGQSGYIDQVLAKHLDKRTK 1109
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Match: UPI001A499DEB (uncharacterized protein n=2 Tax=Ustilago hordei TaxID=120017 RepID=UPI001A499DEB) HSP 1 Score: 79.3 bits (194), Expect = 4.030e-14 Identity = 47/156 (30.13%), Postives = 79/156 (50.64%), Query Frame = 1
Query: 4 DFGQAFLTVDIDIEMYIEVAEACQVFPRDVGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHAEPCAYRRNMDGELKKLVVAYVDDRLIASKGKEAKDPFVTELESRYKIQDLGEESYYMGCHISPNRDARELKLDQHLYV-QT*PSNLDRQAQ 468
D A+L + +Y++ E V P V + +Y L Q+GR W +F+ L+ +GF + PC Y + GE +VV YVDD L+ + E ++ R+K++D GE S+++G IS +R R + + Q Y+ Q +LD+ +
Sbjct: 205 DITMAYLNSTLKEAIYMKPPEGSGVAPGKVYKVVKGLYGLKQSGREWNQEFDRSLQCMGFFQVECAPCIYTKGQ-GEDMAIVVIYVDDTLVIAPRLETVLKVKKQIGQRWKMEDSGEVSHFLGIKISRDRAMRTMTIGQSGYIDQVLAKHLDKHTK 359
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Match: UPI001A60B752 (uncharacterized protein n=2 Tax=Ustilago hordei TaxID=120017 RepID=UPI001A60B752) HSP 1 Score: 79.0 bits (193), Expect = 4.900e-14 Identity = 47/156 (30.13%), Postives = 79/156 (50.64%), Query Frame = 1
Query: 4 DFGQAFLTVDIDIEMYIEVAEACQVFPRDVGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHAEPCAYRRNMDGELKKLVVAYVDDRLIASKGKEAKDPFVTELESRYKIQDLGEESYYMGCHISPNRDARELKLDQHLYV-QT*PSNLDRQAQ 468
D A+L + +Y++ V P V + +Y L Q+GR W +F+ L+ +GF + PC Y + GE +VV YVDD L+ + E ++ R+K++D GE S+++G IS NR R + + Q Y+ Q +LD++ +
Sbjct: 32 DITMAYLNSTLKEAIYMKPPGGSGVAPGKVYKVVKGLYGLKQSGREWNQEFDRSLRRMGFFQVECAPCIYTKGQ-GEDMAIVVIYVDDTLVIAPQLETVLKVKKQIGQRWKMEDSGEVSHFLGIKISRNRAMRTMTIGQSGYIDQVLAKHLDKRTK 186
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Match: UPI001A545582 (uncharacterized protein n=1 Tax=Ustilago hordei TaxID=120017 RepID=UPI001A545582) HSP 1 Score: 79.0 bits (193), Expect = 6.050e-14 Identity = 47/156 (30.13%), Postives = 79/156 (50.64%), Query Frame = 1
Query: 4 DFGQAFLTVDIDIEMYIEVAEACQVFPRDVGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHAEPCAYRRNMDGELKKLVVAYVDDRLIASKGKEAKDPFVTELESRYKIQDLGEESYYMGCHISPNRDARELKLDQHLYV-QT*PSNLDRQAQ 468
D A+L + +Y++ V P V + +Y L Q+GR W +F+ L+ +GF + PC Y + GE +VV YVDD L+ + E ++ R+K++D GE S+++G IS NR R + + Q Y+ Q +LD++ +
Sbjct: 892 DITMAYLNSTLKEAIYMKPPGGSGVAPGKVYKVVKGLYGLKQSGREWNQEFDRSLRRMGFFQVECAPCIYTKGQ-GEDMAIVVIYVDDTLVIAPRLETVLKVKKQIGQRWKMEDSGEVSHFLGIKISRNRAMRTMTIGQSGYIDQVLAKHLDKRTK 1046 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig654.14394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig654.14394.1 >prot_H-paniculata_contig654.14394.1 ID=prot_H-paniculata_contig654.14394.1|Name=mRNA_H-paniculata_contig654.14394.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp MYIEVAEACQVFPRDVGTLTMAIYRLMQAGRCWYNKFNNDLKALGFQPLHback to top mRNA from alignment at H-paniculata_contig654:18489..19000+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig654.14394.1 ID=mRNA_H-paniculata_contig654.14394.1|Name=mRNA_H-paniculata_contig654.14394.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=512bp|location=Sequence derived from alignment at H-paniculata_contig654:18489..19000+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig654:18489..19000+ >mRNA_H-paniculata_contig654.14394.1 ID=mRNA_H-paniculata_contig654.14394.1|Name=mRNA_H-paniculata_contig654.14394.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=792bp|location=Sequence derived from alignment at H-paniculata_contig654:18489..19000+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |