prot_H-paniculata_contig653.14383.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig653.14383.1
Unique Nameprot_H-paniculata_contig653.14383.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length316
Homology
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Match: D7FZL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZL7_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 2.140e-75
Identity = 178/316 (56.33%), Postives = 213/316 (67.41%), Query Frame = 0
Query:    1 SDLLKTLGDVAVTLSMLKESKVGATVSKLKKHADEGVSSSAKALVKKWKKVAEASGVQATPSKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFNLLVLTLTSVHSTHRECQQTSSSTRHVSVIFQATSDRRKAPLLFFSLSIPSKDASTEVQVDALLSQDGVAPSRLRMRRKLMETLLIDFTEGDRLGVATVAREVENAMNGNNPYVSKKDDYLGKARQLVFNLKKNDQLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHEKNADKINKQCGIKETE 316
            +D+L +LG V VTL++L+ESKVGATVSKLKKHADE VS SAKALVKKWK+VAEASGVQ       XXXXXXXX                      XXXXXXXXXXXXXXXXX          + +     +   +S+S                 PL   +    + +  T ++VD++LS D  AP RL+MRRK+ +TLL+  +E +R+  A VA+ VE AMN NNPY+SKK  YL KARQLVFNLKKNDQLRQDVREG+V P+RLV MTSTELMAK+KREAMDKAV +RTEAR LDW++KN DKINKQCGIKET+
Sbjct:   27 ADVLGSLGKVEVTLAVLQESKVGATVSKLKKHADEEVSKSAKALVKKWKRVAEASGVQGXXXXXXXXXXXXXXSPPGSAGKGSGASKQEVPSPSGXXXXXXXXXXXXXXXXXXXXXXATAATSPLKGAVGKTATSSTS--------------EAVPLSRQTSGSSTSELCTTLEVDSILSDDEPAPLRLKMRRKMFDTLLLGSSEDERIPTARVAKGVECAMNENNPYLSKKASYLDKARQLVFNLKKNDQLRQDVREGLVEPQRLVAMTSTELMAKDKREAMDKAVSERTEARMLDWYDKNEDKINKQCGIKETD 328          
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Match: A0A836CH25_9STRA (Transcription factor S-II-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH25_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.500e-27
Identity = 128/319 (40.13%), Postives = 178/319 (55.80%), Query Frame = 0
Query:    2 DLLKTLGDVAVTLSMLKESKVGATVSKLKKHADEGVSSSAKALVKKWKKVAEASGVQATPSKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFNLLVLTLTSVHSTHRECQQTSSSTRHVSVIFQATSDRRKAPLLFFSLSIPSKDASTEVQVDAL----LSQDGVAPSRLRMRRKLMETLLI----DFTEGDRLGVATVAREVENAMNGNNPYVSKKDDYLGKARQLVFNLKKNDQLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHEKNADKINKQCGI 312
            D+L  L  V +T+ ++ ESK+G+ VSKL+KHAD  V+  AKALVK WK++A+A+GV+ +    EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       +     V    ++ ++ S+ +      F + +  R         + P+K  + +  V A     L +DG+ P+RL+MR+K +E  ++    +    D    A  A  VE  +N   P+V          RQL+FNLKKN  LR DV  G VP   L+ M+ TE+++  KR+AM+    D  +ARR+DW EKN D+INKQCGI
Sbjct:   30 DILSQLEKVDMTVDIMAESKIGSAVSKLRKHADSRVAGQAKALVKVWKQLAQAAGVEGSNRAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASAEQK----------------LRVQAPVEKALKDLRRGSTDS------FVSDASPRVGG------AKPAKAQTPKATVSAAHMASLQEDGLLPNRLKMRQKFLEIFVLPEDDESAAPDGQLAAEAACGVERELNAKFPFV----------RQLLFNLKKNAALRSDVVHGAVPCGALIAMSPTEMLSAAKRQAMEAQAQDLVDARRMDWAEKNQDEINKQCGI 310          
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Match: A0A1V9Z9K2_9STRA (Transcription elongation factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9K2_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.680e-19
Identity = 100/321 (31.15%), Postives = 130/321 (40.50%), Query Frame = 0
Query:    2 DLLKTLGDVAVTLSMLKESKVGATVSKLKKHADEGVSSSAKALVKKWKKVA-----EASGVQATPSKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFNLLVLTLTSVHSTHRECQQTSSSTRHVSVIFQATSDRRKAPLLFFSLSIPSKDASTEVQVDALLSQDGVAPSRLRMRRKLMETL-LIDFTEGDRLGVATVAREVENA----MNGNNPYVSKKDDYLGKARQLVFNLKKNDQLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHEKNADKINKQCGI 312
            D L  L  + +TLS+LKESK+G TV KL+KH D  V+  AKALVKKWK +A      AS V A PSK                                                    NL+   +  + +                   +  ++ +K        S+    +S +V         G++  R  +RRKL E L L D           VA E   A    M+        K DY  K RQL FNLKKN+ LR +V    V  + LV M+  EL  +E+R   DK   D  ++ RLDW   NADKINKQCGI
Sbjct:   26 DALGHLESIPMTLSILKESKIGQTVGKLRKHEDPKVAEPAKALVKKWKSIALSPRTSASDVTAEPSKPAK-------------------------------------------------NLVAAAVQKIEA-------------------KVKTEPKK--------SVAYTGSSEKVMAATSFIPPGLSTVRATVRRKLKEVLELADEDLRSEAEYVAVAIETSMAKLYGMDKGLETAQAKKDYGSKYRQLSFNLKKNEILRDEVLTQTVSGDVLVNMSPDELATQERRLEKDKFRDDAFQSSRLDWDVANADKINKQCGI 270          
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Match: A0A7S2ETU1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ETU1_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.050e-19
Identity = 95/317 (29.97%), Postives = 135/317 (42.59%), Query Frame = 0
Query:    2 DLLKTLGDVAVTLSMLKESKVGATVSKLKKHADEGVSSSAKALVKKWKKVAEASGVQATPSKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFNLLVLTLTSVHSTHRECQQTSSSTRHVSVIFQATSDRRKAPLLFFSLSIPSKDASTEVQVDALLSQ--DGVAPSRLRMRRKLMETLLIDFTE-GDRLGVATVAREVENAMNGNNPYVSKKDD--YLGKARQLVFNLKKNDQLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHEKNADKINKQCGIK 313
            D+L+ L +V +TL +L E+ VG  VSKLK H D  V S AKALVKKWKK+A+  GV                                                                             TS+ST +V+        ++   L+  S +  +  A+T   + A + Q  D + P R  +  KL + L        D+   A  A  VE A+N     +S+ D   Y  KAR L FNLKKN QLR++V    + P++LV M   +L + +K +A  +A +  +E+R LDW +KN  KIN  CGIK
Sbjct:   35 DILQRLEEVPMTLKLLSETLVGTVVSKLKSHKDAAVQSKAKALVKKWKKLAKEGGVG----------------------------------------------------------------------------TSTSTTNVA------KPKKAGDLVRRSSTSSTASATTAPSIPANIQQEWDKLGPLRKNIVTKLHDILYASSKVLSDKSDTALRAAAVERAINS----ISRGDKGAYTAKARSLFFNLKKNQQLRENVLLEHISPKQLVTMPPDQLASADKVKARTEAANQLSESRLLDWEQKNEAKINDMCGIK 265          
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Match: A0A7R9WI09_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WI09_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 8.070e-18
Identity = 101/312 (32.37%), Postives = 139/312 (44.55%), Query Frame = 0
Query:    2 DLLKTLGDVAVTLSMLKESKVGATVSKLKKHADEGVSSSAKALVKKWKKVAEASGVQATPSKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFNLLVLTLTSVHSTHRECQQTSSSTRHVSVIFQATSDRRKAPLLFFSLSIPSKDASTEVQVDALLSQDGVAPSRLRMRRKLMETLLIDFTEGDRLGVATVAREVENAMNGNNPYVSKKDDYLGKARQLVFNLKKNDQLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHEKNADKINKQCGIK 313
            D+L+ L D  + +++L ++ VGA VSK+K H D  V+++AKALVKKWKK+A+  GV +     +  XXXXXXXXXXX                                              V    R  + ++S            ++    P L  ++S   +D   + + +      G+ PS +        +L +             A EVENA+          ++Y  KAR LVFNLKKN  +R  V  G + PE LV M S EL   EK  A  K V D  ++RRLDW   N DKINKQCGIK
Sbjct:    7 DILRRLDDADINIAVLSQTLVGAVVSKMKSHRDASVAAAAKALVKKWKKLAKEGGVGSGSGGPKKLXXXXXXXXXXX--------------------------------------------NGVGVARRASEPSTSGAGD-------EAEWSHLPPLRRNISNKLRDIFLQSKAELTRGDGGLDPSAVT-------SLCVSR-----------ASEVENAVQAQ--LKGDVNNYKDKARSLVFNLKKNASVRDQVLLGRIGPEDLVKMRSEELATSEKAAARAKLVSDLQDSRRLDWETANEDKINKQCGIK 247          
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Match: W4G1Y0_9STRA (Transcription elongation factor S-II n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1Y0_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 7.460e-17
Identity = 94/329 (28.57%), Postives = 150/329 (45.59%), Query Frame = 0
Query:    1 SDLLKTLGDVAVTLSMLKESKVGATVSKLKKHADEGVSSSAKALVKKWKKVAEA---SGVQATPS-KAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFNLLVLTLTSVHSTHRECQQTSSSTRHVSVIFQATSDRRKAPLLFFSLSIPSKDASTEVQVDALLSQDGVAPSRLRMRRKLMETLLIDFT-----EGDRLGVA---TVARE--VENAMNGNNPYVSKKDDYLGKARQLVFNLKKNDQLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHEKNADKINKQCGIKET 315
            +D ++ L  V +TL++LK++K+G T++KL+KH  E VSS AK L+KKWK +A     S ++  P  K+E                                                      + + ++    +   +   +   +++        R+AP+  FS    S+  ST  +        G+   R  +RRKL E L +  T     E + + V     +ARE  +++A N N      K  Y  K RQ+ FNLKKN+ LRQ++    +  ++L+ M+  E+  +E+R+ MD+   D  +  RLDW E NADKINK CGIK+T
Sbjct:   26 ADAMEHLNTVDMTLAILKDTKIGQTIAKLRKHDAEVVSSKAKHLLKKWKTLASRPSDSDIKVDPDVKSEMGTPKVSPTASDLSAKDESKWS--------------------------------VKVETIKDEPKRPVKDDPAATPITI--------RRAPVHAFS----SQRNSTPFE----FIPKGLQDVRATVRRKLKEVLSVAETPELVAEAEFVAVGIEVAMAREFKMDSARNTNEG----KKHYTDKYRQVSFNLKKNESLRQNLLTHHISGDQLIKMSPDEMATEERRKEMDQLRDDAFQRARLDWAEANADKINKACGIKDT 302          
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Match: A0A067BNN7_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BNN7_SAPPC)

HSP 1 Score: 86.3 bits (212), Expect = 1.110e-15
Identity = 92/318 (28.93%), Postives = 124/318 (38.99%), Query Frame = 0
Query:    2 DLLKTLGDVAVTLSMLKESKVGATVSKLKKHADEGVSSSAKALVKKWKKVAEASGVQATPSKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFNLLVLTLTSVHSTHRECQQTSSSTRHVSVIFQATSDRRKAPLLFFSLSIPSKDASTEVQVDALLSQDGVAPSRLRMRRKLMETLLIDFTEGDRLGVATVAREVENAM-------NGNNPYVSKKDDYLGKARQLVFNLKKNDQLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHEKNADKINKQCGI 312
            D L  L  +A+TLS+LKESK+G T+ KL+KH D  V+  AK LVKKWK                                                                      L L+   ST    +     T  ++ + +    +               + + E +  A      ++  R  +R+KL E L +   E  R      A  +E AM        G  P   KK+ Y  K RQL FNLKKN+ LR +V    V  ++LV+MT  EL  +E R   DK   D  ++ RLDW   NADKINKQCGI
Sbjct:   29 DGLDHLDSIAMTLSLLKESKIGQTIGKLRKHDDAKVAEKAKHLVKKWK---------------------------------------------------------------------ALALSPRTSTTDVTKDAPKKTTEMAAVAKKLEGK--------------VEKTAEKKPSANFLPSNLSNVRTTVRKKLKEVLEL-ADEDLRSEAEFAAMSIETAMAKLYKMDKGLEPADMKKE-YTSKFRQLSFNLKKNEMLRDEVLTLTVTADQLVLMTPDELATQELRLEKDKFRDDAFQSSRLDWDVANADKINKQCGI 261          
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Match: A0A6A5AKX6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AKX6_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.380e-15
Identity = 91/323 (28.17%), Postives = 141/323 (43.65%), Query Frame = 0
Query:    1 SDLLKTLGDVAVTLSMLKESKVGATVSKLKKHADEGVSSSAKALVKKWKKVAEA---SGVQATPS-KAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIFNLLVLTLTSVHSTHRECQQTSSSTRHVSVIFQATSDRRKAPLLFFSLSIPSKDASTEVQVDAL-LSQDGVAPSRLRMRRKLMETLLIDFTEGDRLGV-ATVARE--VENAMNGNNPYVSKKDDYLGKARQLVFNLKKNDQLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHEKNADKINKQCGIKET 315
            +D ++ L  V +TL++LK++K+G T++KL+KH  E VSS AK L+KKWK +A     S ++  P  K+E                                                      +    V  T  +      S    S      +  R +P +F              Q+DA+ +  +G+A  R R R    +           +G+   +ARE  +++A N N      K  Y  K RQ+ FNLKKN+ LRQ++    +  ++L+ M+  E+  +E+R+ MD+   D  +  RLDW E NADKINK CGIK+T
Sbjct:   26 ADAMEHLNTVDMTLAILKDTKIGQTIAKLRKHEAEVVSSKAKHLLKKWKTLASRPSDSDIKVDPDVKSE------------------------------------------------------MGTPKVSPTASDLSAKDESNEGRSGCHPHHNPARTSPRVF-----------EPAQLDAVRVHPEGIA-GRARHRAPKAQGGXXXXXXXVAVGIEVAMAREFKMDSARNTNEG----KKHYTDKYRQVSFNLKKNESLRQNLLTHHISGDQLIKMSPDEMATEERRKEMDQLRDDAFQRARLDWAEANADKINKACGIKDT 278          
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Match: A0A7S0XKL3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XKL3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 8.080e-15
Identity = 50/120 (41.67%), Postives = 67/120 (55.83%), Query Frame = 0
Query:  194 KLMETLLIDFTEGDRLGVATVAREVENAMNGNNPYVSKKDDYLGKARQLVFNLKKNDQLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHEKNADKINKQCGIK 313
            K   TL+      D L   TV R  +  M     ++S+K +YLGKAR L FNLKKN  L   +  G VP + LV MTS +L++ EKR+  ++      +A  LDW  +N DKIN+ CGIK
Sbjct:  147 KAKPTLIKQGINADALDHLTVERATDIEMAIQTKFMSQKQEYLGKARSLCFNLKKNTGLAAQIILGQVPSKELVGMTSEQLISDEKRKEFEERKKSLMDANMLDWEAQNEDKINEMCGIK 266          
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Match: A0A7S1ZLW0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZLW0_TRICV)

HSP 1 Score: 75.1 bits (183), Expect = 4.020e-12
Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = 0
Query:  215 AREVENAMNGNNPYVSKKDDYLGKARQLVFNLKKNDQLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHEKNADKINKQCGIK 313
            A E+E A+   +   S  D Y  KAR LVFNLKKN  LR+ +  GVV  +RL  M   EL++ +K  A  K V D  ++RRLDW + N  +IN+QCGIK
Sbjct:   95 AAEMEAAVQSRSRGDS--DSYKEKARSLVFNLKKNGPLREQILLGVVSGDRLCSMKPDELLSADKARARAKMVGDLQDSRRLDWEQANEARINEQCGIK 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig653.14383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FZL7_ECTSI2.140e-7556.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CH25_9STRA1.500e-2740.13Transcription factor S-II-domain-containing protei... [more]
A0A1V9Z9K2_9STRA1.680e-1931.15Transcription elongation factor n=1 Tax=Achlya hyp... [more]
A0A7S2ETU1_9STRA3.050e-1929.97Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7R9WI09_9STRA8.070e-1832.37Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
W4G1Y0_9STRA7.460e-1728.57Transcription elongation factor S-II n=3 Tax=Aphan... [more]
A0A067BNN7_SAPPC1.110e-1528.93Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A6A5AKX6_9STRA3.380e-1528.17Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S0XKL3_9STRA8.080e-1541.67Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S1ZLW0_TRICV4.020e-1246.46Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003618Transcription elongation factor S-II, central domainSMARTSM00510mid_6coord: 189..286
e-value: 0.0085
score: 14.2
IPR003618Transcription elongation factor S-II, central domainPFAMPF07500TFIIS_Mcoord: 188..286
e-value: 1.2E-15
score: 57.9
IPR003618Transcription elongation factor S-II, central domainPROSITEPS51321TFIIS_CENTRALcoord: 187..302
score: 14.337
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10coord: 1..69
e-value: 4.9E-14
score: 53.8
IPR035441TFIIS/LEDGF domain superfamilySUPERFAMILY47676Conserved domain common to transcription factors TFIIS, elongin A, CRSP70coord: 2..56
IPR036575Transcription elongation factor S-II, central domain superfamilyGENE3D1.10.472.30coord: 184..286
e-value: 2.2E-13
score: 52.4
IPR036575Transcription elongation factor S-II, central domain superfamilySUPERFAMILY46942Elongation factor TFIIS domain 2coord: 186..278
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 2..50
e-value: 1.5E-10
score: 40.9
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 1..55
score: 17.813
NoneNo IPR availablePANTHERPTHR11477TRANSCRIPTION ELONGATION FACTOR S-IIcoord: 2..289
NoneNo IPR availablePANTHERPTHR11477:SF3TRANSCRIPTION ELONGATION FACTOR A PROTEIN 2coord: 2..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig653contigH-paniculata_contig653:1532..9094 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig653.14383.1mRNA_H-paniculata_contig653.14383.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig653 1532..9094 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig653.14383.1 ID=prot_H-paniculata_contig653.14383.1|Name=mRNA_H-paniculata_contig653.14383.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp
SDLLKTLGDVAVTLSMLKESKVGATVSKLKKHADEGVSSSAKALVKKWKK
VAEASGVQATPSKAEKTEKPSQGNGGSSGGSSVQSPSSVANSGGKGSSAS
LSRKSSASSSYNQIFNLLVLTLTSVHSTHRECQQTSSSTRHVSVIFQATS
DRRKAPLLFFSLSIPSKDASTEVQVDALLSQDGVAPSRLRMRRKLMETLL
IDFTEGDRLGVATVAREVENAMNGNNPYVSKKDDYLGKARQLVFNLKKND
QLRQDVREGVVPPERLVVMTSTELMAKEKREAMDKAVHDRTEARRLDWHE
KNADKINKQCGIKETE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003618TFIIS_cen_dom
IPR035441TFIIS/LEDGF_dom_sf
IPR036575TFIIS_cen_dom_sf
IPR017923TFIIS_N