prot_H-paniculata_contig6529.14381.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6529.14381.1
Unique Nameprot_H-paniculata_contig6529.14381.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length688
Homology
BLAST of mRNA_H-paniculata_contig6529.14381.1 vs. uniprot
Match: A0A6H5KB40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB40_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 4.880e-43
Identity = 194/631 (30.74%), Postives = 261/631 (41.36%), Query Frame = 0
Query:  107 PHAFPRTLCVLLEALEAGDNSVRLCVARLLERFRPYLGSTVLAIEVIRRVSALLG-HDDPTAREVALDILSAAAFAVGGLPPSVLIAVDRSLRSRSLAEREAAARAYASCLCLHRSGDRHHPYCSSQSP-----------ISGRTLSDMTSLASALVPRLGWDSPXXXXXXXAPTEEGGGDAGQGVTVRARRQSVKAFLDTLLSKLAGDTPSMELWESTKAFILSPETGMDTTDXXXXXXXXXXXXTSEGVSNTNDRASFAVEVLNMILARLQIASMGGSTGGGGNPTTLRRIALDLTITLLRTEAVANASGTAGGDVSAVTSFTHDDDDNDATMTDSAAVNAGAAV-GSGTLKCLVNALCSA-ESETEKVEVLSIVGAPTVADAALTAAXXXXXXXXXXXXXXXGVDQALA------------------------------LATVVVETLKELCCSSPTAEGSSSISSSMLRSAMWSGSSPRVSLAAAAALVGFAVSSFRKAS---PGGNAYPSGALQRAALSKLAELATDGVVDSQPFRRLFFSGSCYGGSNGLIGSKGPIGMELEARIMLPKLRDLGNAHPGARRTIALAAARRLNSVDPGGSFAVDLAVLVSQLMKS---DADGGDG 687
            P AFPR +C+LLEA E GDN+++L  ARLLER RPY G  +LA+EV +RVS +LG HDDPT RE+ LD+LSA  F  GGLP  +L+ + RSLRS  LAER AAARAYASC+C HRS                        ++ RTL +M++L+SAL+P L  +              GGG  G G   R     V+  L+ +L K++                 +P        XX           S       +R+ FA       +A  + A                            T   A+AS                        T  AA  A     G  ++  L++A   A E+  EK E+LS++GAP +A A L A                G   A                                LAT  VE  + LC S                             A A++LV ++V++FR+       G    S A +  AL+ LAE A +GV+ S P  RL  S          IG  GP  +   AR++LP+LR L   H   R+ +ALA AR L  V P  + AV+LAVLVS ++++   D  GG G
Sbjct:    3 PEAFPRCVCLLLEAFEGGDNAIKLSAARLLERCRPYFGGNILAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFLAERRAAARAYASCMCAHRSXXXXXXXXXXXXXXXXXXXXXXPALTPRTLEEMSALSSALLPLLSCEGGDARVSGWR--GGGGGREGGGFFPR----DVEELLEAVLWKVSAAP--------------APAAXXXXXXXXALRAMAVDFFVSLIHMEAVERSKFA-------MAAAEAAVKXXXXXXXXXXXXXXXXXXXXXXXXXXTSGGASAS------------------------TAKAAPRATPPTPGRSSVWRLLDAFSVASEAHGEKAELLSVLGAPALAVAVLEAEAVAGAKSAGKMAAAHGFGDAAGGGXXXXXXXXXXXXGRVGEEAHALARIRFPLATAAVEAFRRLCTSPXXXXXX------XXXXXXXXXXXXXXXXACASSLVSYSVAAFRETPFYPADGGVSDSAARREKALAALAEFAAEGVLSSLPVLRLLSSRG--------IGGGGPAAVAAGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVLVSHVVRAGEVDDKGGGG 568          
BLAST of mRNA_H-paniculata_contig6529.14381.1 vs. uniprot
Match: D8LGT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGT4_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 2.160e-38
Identity = 193/646 (29.88%), Postives = 261/646 (40.40%), Query Frame = 0
Query:   78 IRVASSRRSLAISEAVQMAQSAFVEGEFQPHAFPRTLCVLLEALEAGDNSVRLCVARLLERFRPYLGSTVLAIEVIRRVSALLG-HDDPTAREVALDILSAAAFAVGGLPPSVLIAVDRSLRSRSLAEREAAARAYASCLCLHRSGDRHHPYCSSQSPISGRTLSDMTSLASALVPRLGWDSPXXXXXXXAPTEEGGGDAGQGVTVRARRQSVKAFLDTLLSKLAGDTPSMELWESTKAFILSPETGMDTTDXXXXXXXXXXXXTSEGVSNTNDRASFAVEVLNMILARLQIASMGGSTGGGGNPTTLRRIALDLTITLLRTEAVANASGTAGGDVSAVTSFTHDDDDNDATMTD-----------------------------SAAVNAGAAV-GSGTLKCLVNALCSA-ESETEKVEVLSIVGAPTVADAALTAAXXXXXXXXXXXXXXXGVDQALALATVVVETLKELCCSSPTAEGSSSISSSMLRSAMWSGSSPRVSLAAAAALVGFAVSSFRKAS---PGGNAYPSGALQRAALSKLAELATDGVVDSQPFRRLFFSGSCYGGSNGLIGSKGPIGMELEARIMLPKLRDLGNAHPGARRTIALAAARRLNSVDPGGSFAVDLAVLVSQLMKSDADGGDGG 688
            +R  +S RS+A+S+A+  AQS F  GEFQP AFPR +C+LLEA E GDN+++L  ARLLER RPY G  VLA+EV +RVS +LG HDDPT RE+ LD+LSA  F  GGLP  +L+ + RSLRS  LA                                                                                                ++GD PS ELWES K F+L  +T      XXXX        T   V+   D     +                    G  NP  LR +A+D  ++L+  EAV  +        +AV                                              AA  A     G  ++  L++A+ +A E+  EK E+LS++GAP VA A L A                   +A+A A    +    L             SSS+L             LA A++LV ++ ++FR+       G    S A +  AL+ LAE A DGV+ S P  RL  S    GG        GP      AR++LP+LR L   H   R+ +ALA AR L  V P  + AV+LAVLVS ++++  +G D G
Sbjct:    2 MRAVNSCRSVAVSDAILAAQSTFEGGEFQPEAFPRCVCLLLEAFEGGDNAIKLSAARLLERCRPYFGGNVLAVEVAQRVSQVLGYHDDPTTRELCLDVLSAVTFGTGGLPRGILLDIGRSLRSPFLA------------------------------------------------------------------------------------------------VSGDLPSTELWESLKVFLLDEDTSXXXXXXXXXE-------TQLNVTALVDLVLHRLRSNXXXXXXXXXXXXXXXXPGASNPA-LRAMAVDFFVSLIHVEAVERSKFAMAAAEAAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAPRATPPTPGRSSVWRLLDAVSAASEAHGEKAELLSVLGAPAVAVAVLEA-------------------EAVAGAKSAGKMASTLS------------SSSVLL------------LACASSLVSYSGAAFRETPFYPADGGISDSAARRDKALAALAEFAADGVLSSLPVLRLLSSRGISGG--------GPAAA-AGARLLLPQLRALAAVHAWPRQRVALAVARSLRRVPPTSALAVELAVLVSHVVRA-GEGDDKG 490          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6529.14381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KB40_9PHAE4.880e-4330.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGT4_ECTSI2.160e-3829.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 116..563

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6529contigH-paniculata_contig6529:6581..11428 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6529.14381.1mRNA_H-paniculata_contig6529.14381.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6529 6581..11452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6529.14381.1 ID=prot_H-paniculata_contig6529.14381.1|Name=mRNA_H-paniculata_contig6529.14381.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=688bp
MTSLLPPGKFDSRQQQRSVLQKQRKLPHQQQQQQQQQQQQQQHPRYYGQP
SEGQYYAHQNREYGGESYGSAVAVPLTIRVASSRRSLAISEAVQMAQSAF
VEGEFQPHAFPRTLCVLLEALEAGDNSVRLCVARLLERFRPYLGSTVLAI
EVIRRVSALLGHDDPTAREVALDILSAAAFAVGGLPPSVLIAVDRSLRSR
SLAEREAAARAYASCLCLHRSGDRHHPYCSSQSPISGRTLSDMTSLASAL
VPRLGWDSPGWDSPGWAPTEEGGGDAGQGVTVRARRQSVKAFLDTLLSKL
AGDTPSMELWESTKAFILSPETGMDTTDDSAAAAAAAAAATSEGVSNTND
RASFAVEVLNMILARLQIASMGGSTGGGGNPTTLRRIALDLTITLLRTEA
VANASGTAGGDVSAVTSFTHDDDDNDATMTDSAAVNAGAAVGSGTLKCLV
NALCSAESETEKVEVLSIVGAPTVADAALTAAEAAAAAAMKAGEGGEGVD
QALALATVVVETLKELCCSSPTAEGSSSISSSMLRSAMWSGSSPRVSLAA
AAALVGFAVSSFRKASPGGNAYPSGALQRAALSKLAELATDGVVDSQPFR
RLFFSGSCYGGSNGLIGSKGPIGMELEARIMLPKLRDLGNAHPGARRTIA
LAAARRLNSVDPGGSFAVDLAVLVSQLMKSDADGGDGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold