prot_H-paniculata_contig6528.14380.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6528.14380.1
Unique Nameprot_H-paniculata_contig6528.14380.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
BLAST of mRNA_H-paniculata_contig6528.14380.1 vs. uniprot
Match: D8LB40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB40_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 6.900e-17
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    1 LCSRKPSTGAFGNMGVMATVRQLDSEQLEADRVEVTARLFMGKKCRPQYQRVPVPLSTRDTEEMKAKQWISLKKAFV 77
            L + KPSTGA GN+GV++TVR LD E      VEVTARLFMGK  R +  R+PVPLSTRD E+ KAKQW +L++AF+
Sbjct:  550 LSATKPSTGAIGNLGVISTVRYLDGEV--PGNVEVTARLFMGKG-RQRSCRLPVPLSTRDDEQEKAKQWAALREAFL 623          
BLAST of mRNA_H-paniculata_contig6528.14380.1 vs. uniprot
Match: A0A6H5KIX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX0_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 6.120e-16
Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 LCSRKPSTGAFGNMGVMATVRQLDSEQLEADRVEVTARLFMGKKCRPQYQRVPVPLSTRDTEEMKAKQWISLKKAFV 77
            L + KPSTGA GN+G+++TVR LD E      VEVTARLFMGK  R    R+PVPLS RD EE KAKQW +L+ AF+
Sbjct:  578 LSATKPSTGAIGNLGLISTVRYLDGEV--PGNVEVTARLFMGKGRRRSC-RLPVPLSARDNEEEKAKQWAALRAAFL 651          
BLAST of mRNA_H-paniculata_contig6528.14380.1 vs. uniprot
Match: A0A7S4LLB3_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLB3_9EUGL)

HSP 1 Score: 50.4 bits (119), Expect = 2.260e-5
Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 0
Query:    5 KPSTGAFGNMGVMATVRQLDSEQLEADRVEVTARLFMGKKCRPQYQRVP-VPLSTRDTEEMKAKQWISLKKAFV 77
            +P+T  FGN G++  VR++     + D   V+ARLFMG+K       VP VPLS +DT+   A+QW   +  FV
Sbjct:  340 RPTTAIFGNWGILQAVRRMTDADADVD---VSARLFMGRKVS---SGVPDVPLSAKDTDADIAEQWNKFRAEFV 407          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6528.14380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LB40_ECTSI6.900e-1761.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIX0_9PHAE6.120e-1659.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4LLB3_9EUGL2.260e-540.54Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6528contigH-paniculata_contig6528:7646..9814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6528.14380.1mRNA_H-paniculata_contig6528.14380.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6528 7646..9814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6528.14380.1 ID=prot_H-paniculata_contig6528.14380.1|Name=mRNA_H-paniculata_contig6528.14380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
LCSRKPSTGAFGNMGVMATVRQLDSEQLEADRVEVTARLFMGKKCRPQYQ
RVPVPLSTRDTEEMKAKQWISLKKAFV
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