mRNA_H-paniculata_contig6523.14375.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6523.14375.1
Unique NamemRNA_H-paniculata_contig6523.14375.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Match: A0A6H5KZC7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZC7_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 5.480e-88
Identity = 225/282 (79.79%), Postives = 245/282 (86.88%), Query Frame = 1 
Query:  136 VKGNFGDAASFLVEKGADANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLGKTETDPDXXXXXXXXXXXXXXXXXXXAAVDAIVKHGANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGGKEDDVNAKIIRDSLQVHTNIIAALKASGADPSIVDKDGHSAQDYEDLDSQHEDKKLGGHKETAGNKIEGVGGSGSGAGRLDPPRSRPGASPS 981
            VKGNFGDAAS+LVEKG  ANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGA+VNVTDEQGVTTLIQAAHRGM+ ICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLGK + DPDXXXXXXXXXXXXXXXXXXX     +++HGANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGGKEDD NAKII+DSLQVHTNIIAAL+A+GADP ++D +G+SAQD+E   SQH           AG++ EG     SGAGRL+PPR+RP   P+
Sbjct:  676 VKGNFGDAASYLVEKGXXANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGADVNVTDEQGVTTLIQAAHRGMLVICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLGKAKADPDXXXXXXXXXXXXXXXXXXXXXXXXLLRHGANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGGKEDDGNAKIIQDSLQVHTNIIAALQAAGADPGLLDTNGNSAQDFE---SQH----------PAGHETEG---GASGAGRLEPPRARPAVPPT 941
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BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Match: A0A7S2UKR6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKR6_9STRA)

HSP 1 Score: 154 bits (390), Expect = 7.860e-36
Identity = 113/253 (44.66%), Postives = 147/253 (58.10%), Query Frame = 1 
Query:  121 SLGL*VKGNFGDAASFLVEKGADANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LLLGKTETDPDXXXXXXXXXXXXXXXXXXXAAVDAIVKHGANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGGK-------EDDVNAKIIRDSLQVHTNIIAALKASGADPSIVDKDGHSAQDYE 840
            +L L VKGN+G+ AS LV+ GAD N  YVD+ G+ H+LLMDAIIVEN  FA LLVK+G  +   DE  VTTL+QA HRGMVS+                                         LLLG++  D +    XXXXXXXXXXXXXXX      +K GA+V++QN+DGHTALMFAYNG+NQV  L  RY ++V          +D     II+++L  HT ++  L  SGAD ++ DK+GH+A D++
Sbjct:  366 ALLLAVKGNYGEVASALVKGGADPNTPYVDDDGEPHNLLMDAIIVENEEFAVLLVKNGGALYHQDEHQVTTLLQATHRGMVSVVEALLAQYDPTAHPEYLNAPSDEGITPLIAASSEGHVEIIKLLLGQSGIDVNVKDKXXXXXXXXXXXXXXXXXXXXXLKAGASVNEQNIDGHTALMFAYNGKNQVETLWERYHQFVRDSSASEEKVDDGGTGPIIQEALDNHTALVDLLLKSGADATLKDKEGHTAGDFD 618
[Close]
BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Match: A0A7S1GGD5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GGD5_CYCTE)

HSP 1 Score: 150 bits (378), Expect = 3.560e-35
Identity = 109/253 (43.08%), Postives = 146/253 (57.71%), Query Frame = 1 
Query:  109 DGDLSLGL*VKGNFGDAASFLVEKGADANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----LLLGKTETDPDXXXXXXXXXXXXXXXXXXXAAVDAIVKHGANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGG----KEDDVNA-KIIRDSLQVHTNIIAALKASGADPSIVDKDGHSAQDYE 840
            +G  +L L +KGN G+ A  LV+ GA+ N  YVDE GD H+LLMDAIIVEN  FA LL++ GA++   DE+ VTTL+QA+HRG+  +                                       LL+     D +     XXXXXXXXXXXXXX      +K GA+V++QN DGHTALMFA+NG+NQV  L  RY +YV      KEDD     IIR++L  HT ++  L  +GAD ++ DK+GH+A+D++
Sbjct:  197 EGRTALLLAIKGNHGEVAVELVKAGANPNTPYVDEDGDSHNLLMDAIIVENNDFATLLIEKGADLYYKDERKVTTLLQASHRGLTDVVKALLDKHGKKKDYVDDASDEGITPLIAACSEGHQEVVQLLVENKNIDVNAKDKDXXXXXXXXXXXXXXXXXXXXLKAGASVNEQNSDGHTALMFAFNGKNQVETLWERYSQYVKDDEKDKEDDGGTGPIIREALDNHTALVELLIKNGADETLKDKEGHTAKDFD 449
[Close]
BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Match: A0A6U3Q8H2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q8H2_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.100e-33
Identity = 104/256 (40.62%), Postives = 138/256 (53.91%), Query Frame = 1 
Query:  136 VKGNFGDAASFLVEKGADANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------LLLGKTETDPDXXXXXXXXXXXXXXXXXXXAAVDAIVKHGANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYV----------GGKEDDVN----AKIIRDSLQVHTNIIAALKASGADPSIVDKDGHSAQDYE 840
            VKGNFG+ A+ LV  GAD N VYVDE G+ H+LLMDAIIVEN  FA LL+ +GA+    DE  VTTL+QA+HRGM  +                                          LL+ + + D D         XXXXXXXXXX      +  GA V++QN+DGHTALMFAYNG+NQV  L  RY ++V          G  E++++      IIR++L  HT ++  L  +GAD  + DK+GH+A D++
Sbjct:  637 VKGNFGEVATELVRAGADPNTVYVDEDGESHNLLMDAIIVENDEFAILLIGNGADPYHEDENKVTTLLQASHRGMADVVKALLKRHKDAGGKEGYVDSPSDEGITPLIAAASEGHVEVVKLLIDEAKADVDAKDKDETNSXXXXXXXXXXXXXXXXLAAGAKVNEQNVDGHTALMFAYNGKNQVETLWERYNQFVNEAKAEQTDKGESEEEIDDGGTGPIIREALDNHTALVELLLKNGADEKLKDKEGHTAADFD 892
[Close]
BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Match: W7T4W4_9STRA (Ankyrin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4W4_9STRA)

HSP 1 Score: 140 bits (353), Expect = 9.920e-31
Identity = 123/216 (56.94%), Postives = 154/216 (71.30%), Query Frame = 1 
Query:  193 NDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLGKTETDPDXXXXXXXXXXXXXXXXXXXAAVDA-IVKHGANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGGKEDDVNAKIIRDSLQVHTNIIAALKASGADPSIVDKDGHSAQDY 837
            N++YVDE G  H+LLMDAIIVEN  FA+LL++ GA++  T + G+TTLIQA+H+G+  +              XXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXX      ++KHGA V+ QN DGHTAL FAYNG NQVA+LL +Y EYV G E+D N KII+++L+ HT ++  LK SGAD ++ DK+GH+A D+
Sbjct:  629 NELYVDEDGVEHNLLMDAIIVENEKFAKLLLEKGADMTQTTKHGITTLIQASHKGLGEVVRILIEGKKVNVDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKHGAEVNAQNSDGHTALFFAYNGLNQVASLLDKYGEYVQG-ENDNNTKIIKEALETHTQVVDLLKLSGADENLKDKEGHTAADF 843
[Close]
BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Match: A0A482RYB2_9ARCH (Ankyrin repeat domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RYB2_9ARCH)

HSP 1 Score: 134 bits (337), Expect = 1.000e-30
Identity = 127/222 (57.21%), Postives = 162/222 (72.97%), Query Frame = 1 
Query:  139 KGNFGDAASFLVEKGADANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLGKTETDPDXXXXXXXXXXXXXXXXXXXAAVDAIVKHGANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGGKEDDVNAKIIRDSLQVHTNIIAALKASGADPSI 804
            K    + + +L+E GA+ NDVYVD+    HSLL+D++ + NVP A LLV+ GAN++VTDE+GVT LIQAA++G  S+     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LL   ++D +XXXXXXXXXXXXXXXXXXX       +H  +++ QN DGHTALMFAYNG+NQV  LL +Y EY+     D + KIIR+++Q H ++++ L   GAD SI
Sbjct:  117 KNKHYNVSYYLLEHGANPNDVYVDDKRKMHSLLLDSVQLSNVPLATLLVQRGANLSVTDEEGVTPLIQAAYQGHNSLVMEMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTLLAHPQSDVNXXXXXXXXXXXXXXXXXXXXXXXXXXEHKVDINAQNTDGHTALMFAYNGKNQVETLLDKYSEYMKEMNGD-SMKIIREAVQTHLDVVSLLLQYGADASI 337
[Close]
BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Match: A0A7S3GQ79_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ79_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.180e-29
Identity = 120/219 (54.79%), Postives = 152/219 (69.41%), Query Frame = 1 
Query:  184 ADANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLGKTETDPDXXXXXXXXXXXXXXXXXXXAAVDAIVKHGANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGGKEDDVNAKIIRDSLQVHTNIIAALKASGADPSIVDKDGHSAQDYE 840
            A+ NDV++D+    H+LLMDA++  NV  A LLV+ GAN+   DE GVT + QAA++G+ S    XXXXXXXXXXXXXXXXXXXXXXXXXXXX    LLL     D D     XXXXXXXXXXXXXX     ++  GANVD QN+DGHTALMFAYNG+NQV  LL +Y +Y+    D+ + K+IRD+L+ H  ++  L  SGA+ +I D +GH A D++
Sbjct:  160 ANPNDVFIDDKLKPHNLLMDAVVNLNVSLALLLVEKGANITYADEDGVTVITQAAYQGLTSFVRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIVELLLATQLIDIDAKDKDXXXXXXXXXXXXXXXXXAQLILKGANVDAQNVDGHTALMFAYNGKNQVETLLDKYSDYLRDVNDN-STKLIRDALETHVEVVHLLIRSGANVAIQDNEGHIASDFD 377
[Close]
BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Match: A0A7S1FMT5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMT5_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.670e-28
Identity = 94/271 (34.69%), Postives = 125/271 (46.13%), Query Frame = 1 
Query:  136 VKGNFGDAASFLVEKGADANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLGKTETDPDXXXXXXXXXXXXXXXXXXXAAVDAIVKHGANVDQQNLD---------------------------------GHTALMFAYNGRNQVAALLSRYLEYVGGKEDDV---NAKIIRDSLQVHTNIIAALKASGADPSIVDKDGHSAQDYE 840
            VKGN+GD AS LVE GAD N+ YVDE G +H+LLMDAIIVEN  FA LL+K GA++   D+  VTTLIQAAHRG+ +I                                   L  G  + D D                   A VDA++  GANV+  + D                                       FAYNGR QV  +  RY +++  K+D V   ++ II+++L  HT I+  L   GAD ++ DK+GH+A D+E
Sbjct:  633 VKGNYGDIASLLVENGADPNETYVDENGKKHNLLMDAIIVENKEFATLLIKAGADLTYVDDHKVTTLIQAAHRGLDTIVDTL-------------------------------LEYGNDKLDVDAASDEGVTAIIASSSEGHKAIVDALIAAGANVNAHDKDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAYNGRTQVRTMWERYSKHL--KDDSVQEGSSDIIQNALNNHTAIVDMLTNGGADLTLKDKEGHTAADFE 870
[Close]
BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Match: A0A7R9U5G3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5G3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.410e-27
Identity = 122/236 (51.69%), Postives = 157/236 (66.53%), Query Frame = 1 
Query:  136 VKGNFGDAASFLVEKGADANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLGKTETDPDXXXXXXXXXXXXXXXXXXXAAVDAIVKHGAN-VDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGGKEDDVNAKIIRDSLQVHTNIIAALKASGADPSIVDKDGHSAQDYE 840
            VKGN  D A+ LVE GA+ NDV+VD+ G  H+LL D+I+V N  FA LL++ GA+++  +   VT LIQAAH+G+ ++           XXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXX             +D QN DGHTALMFAYNG++QVA LL +Y EY+   E+D N  +I+++L  HT ++  L   GA+P + DK+GH+A D++
Sbjct:  591 VKGNHADLAALLVEHGANPNDVFVDDEGVEHNLLFDSILVGNEKFALLLIEKGADLSYKNSHNVTHLIQAAHKGLFNVTKALVASGKVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAQNDDGHTALMFAYNGKSQVATLLDKYTEYIKD-ENDNNTALIKEALTTHTKVVNLLLEGGANPDVKDKEGHTAIDFD 825
[Close]
BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Match: A0A6U4F0Y7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F0Y7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 7.450e-26
Identity = 115/219 (52.51%), Postives = 147/219 (67.12%), Query Frame = 1 
Query:  187 DANDVYVDEGGDRHSLLMDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLGKTETDPDXXXXXXXXXXXXXXXXXXXAAVDAIVKH-GANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGGKEDDVNAKIIRDSLQVHTNIIAALKASGADPSIVDKDGHSAQDYE 840
            +ANDV+ D+ G+ H+LL D+I+V N  FA LL+  GANV+  +   VTTLIQAAH+G+  +              XXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXX          GA++D QN+DGHTALMFAYNG++QVA+LL +Y EYV   E+D N  +IR++L  HT ++  L   GA+P + DK+GH+A D++
Sbjct:  609 NANDVFTDDEGNEHNLLFDSIMVGNEKFASLLIAKGANVDYKNSHNVTTLIQAAHKGLFDVTKALVATGAIDMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGADLDAQNVDGHTALMFAYNGKSQVASLLDKYTEYVQD-ENDNNTALIREALTTHTKVVNVLLEGGANPDVKDKEGHTAIDFD 826
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6523.14375.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5KZC7_9PHAE5.480e-8879.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UKR6_9STRA7.860e-3644.66Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1GGD5_CYCTE3.560e-3543.08Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6U3Q8H2_9STRA2.100e-3340.63Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
W7T4W4_9STRA9.920e-3156.94Ankyrin n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
A0A482RYB2_9ARCH1.000e-3057.21Ankyrin repeat domain-containing protein (Fragment... [more]
A0A7S3GQ79_9STRA1.180e-2954.79Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1FMT5_9STRA1.670e-2834.69Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7R9U5G3_9STRA3.410e-2751.69Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4F0Y7_9STRA7.450e-2652.51Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6523contigH-paniculata_contig6523:7530..12438 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score237.3
Seed ortholog evalue8.3e-60
Seed eggNOG ortholog2880.D7FRY0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size2205
Cds size783
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930764.5218542-UTR-H-paniculata_contig6523:7529..87141622930764.5218542-UTR-H-paniculata_contig6523:7529..8714Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6523 7530..8714 -
1691481441.86772-UTR-H-paniculata_contig6523:7529..87141691481441.86772-UTR-H-paniculata_contig6523:7529..8714Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6523 7530..8714 -
1622930764.609976-UTR-H-paniculata_contig6523:12201..124381622930764.609976-UTR-H-paniculata_contig6523:12201..12438Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6523 12202..12438 -
1691481441.9302895-UTR-H-paniculata_contig6523:12201..124381691481441.9302895-UTR-H-paniculata_contig6523:12201..12438Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6523 12202..12438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930764.5385888-CDS-H-paniculata_contig6523:8714..89841622930764.5385888-CDS-H-paniculata_contig6523:8714..8984Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6523 8715..8984 -
1691481441.8806126-CDS-H-paniculata_contig6523:8714..89841691481441.8806126-CDS-H-paniculata_contig6523:8714..8984Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6523 8715..8984 -
1622930764.552035-CDS-H-paniculata_contig6523:9546..96331622930764.552035-CDS-H-paniculata_contig6523:9546..9633Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6523 9547..9633 -
1691481441.8891635-CDS-H-paniculata_contig6523:9546..96331691481441.8891635-CDS-H-paniculata_contig6523:9546..9633Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6523 9547..9633 -
1622930764.5654628-CDS-H-paniculata_contig6523:9891..100351622930764.5654628-CDS-H-paniculata_contig6523:9891..10035Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6523 9892..10035 -
1691481441.8974128-CDS-H-paniculata_contig6523:9891..100351691481441.8974128-CDS-H-paniculata_contig6523:9891..10035Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6523 9892..10035 -
1622930764.5784502-CDS-H-paniculata_contig6523:10529..107061622930764.5784502-CDS-H-paniculata_contig6523:10529..10706Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6523 10530..10706 -
1691481441.9063122-CDS-H-paniculata_contig6523:10529..107061691481441.9063122-CDS-H-paniculata_contig6523:10529..10706Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6523 10530..10706 -
1622930764.5927875-CDS-H-paniculata_contig6523:12096..122011622930764.5927875-CDS-H-paniculata_contig6523:12096..12201Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6523 12097..12201 -
1691481441.9153314-CDS-H-paniculata_contig6523:12096..122011691481441.9153314-CDS-H-paniculata_contig6523:12096..12201Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6523 12097..12201 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6523.14375.1prot_H-paniculata_contig6523.14375.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6523 8715..12201 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6523.14375.1

>prot_H-paniculata_contig6523.14375.1 ID=prot_H-paniculata_contig6523.14375.1|Name=mRNA_H-paniculata_contig6523.14375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp
MDAIIVENVPFAELLVKHGANVNVTDEQGVTTLIQAAHRGMVSICELVVE
NGVDVGAKSDDGITALIAAASEGHAEIVELLLGKTETDPDAKDKDGTTAL
MAASVRGHKAAVDAIVKHGANVDQQNLDGHTALMFAYNGRNQVAALLSRY
LEYVGGKEDDVNAKIIRDSLQVHTNIIAALKASGADPSIVDKDGHSAQDY
EDLDSQHEDKKLGGHKETAGNKIEGVGGSGSGAGRLDPPRSRPGASPSPF
PSPGNRRDEL*
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mRNA from alignment at H-paniculata_contig6523:7530..12438-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6523.14375.1 ID=mRNA_H-paniculata_contig6523.14375.1|Name=mRNA_H-paniculata_contig6523.14375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4909bp|location=Sequence derived from alignment at H-paniculata_contig6523:7530..12438- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTAAAAAAGACCTCTGACTAAACTTCCAGATATGCTCAGTTCACGAGCTA
CCCTACCCGTTCGGGCGTAGGTCCATGGTTGACGTTTTTTTATTGGGTCA
TCTACGTTGATGGTGACTTGTCTCTTGGTCTTTGAGTGAAGGGGAACTTC
GGGGACGCAGCTTCTTTCCTGGTGGAGAAGGGAGCAGATGCGAATGACGT
CTACGTAGATGAGGGTGGCGATCGACACTCTCTGCTTATGGATGCCATTA
TCGTGGAAAACGTTCCTTTCGCGGAATTGCTGGTGAAGCATGGGGCTAAT
GTGAACGTTACGGACGAGCAAGGGGTGACCACCTTGATACAGGTGAGCAC
CCATATTTAAGCTATGTCGACATGTCGTGTATCAGTGAGTGGGATGTGCG
ATGTATGGACGGAGCATTTTTGACGTATTTAATACGAGCGAGCAGGAAGC
GATTTTCACCGTGCATTTTGTGTGTGTCCTTGAGGCATGCGTCCATGTGT
TTTTACCCGACTGCCTCAAAACTCATGGCTCCCGGATTAGTCGCTGATCG
TGTGCATATGACTTACATATTCTTATCGAGTTTTTGGGTCCGTGCCAAGA
TGCAAGCGGCAGGGGACGATGTATTTCGTTCTGGTCGTAAGTCGGAGGTG
AATGATGCCTTTCATGTTGTTAAGAAAAGCGAACCGAGCAAACGGACAAG
CAGACAAACTGGCAGACAAATCGATCGACATTAAGTTGGTTTTATTTTGT
ACTCTCGAGACATGGCGCGCTGCGCTGCCTGTAGGATGCAGCACCTACTA
GTAGTAGATGTGCATGCTGCCTGCGAAGGAAGATGCGAACCCTTTTTTCA
AGTGAGCCATTTGCTACGTATACACACAATGGATGCACTTGATTCCGACA
GTCGCGGACTTGAATCCGCTGGATAGAAAAAATAGTAGCAACGCACGGAT
CCTTTTGGGTACTTGTCAAACAAAGTAACAAGTTTGTTATTTGTCCTCGG
CATGAACCAACAAACAGCAATCAATCTCCCCGAGCCCGAAAGAACCGAGA
TGACCCCATCCCAATTCCTGCCAGTATCCAAATCCAACGTCCAACGTCCC
CCATTTTTCGTGTATTTCAATTTAAACATAGTTTATCCTACTCTGCACTC
TTGGCGTCAACAAAAGGCCAAAAAATAACCCCGCCTAACCGCGAAACCAC
CCCAAACAAAATCCCAAAAAAGTTTATGTCGAGTTCGGGACCGTTCCTGG
CGTGGTCGTTGGTCCGATTTCAGTACGGAAAACATGTCACTTTGGAGTGC
TGGGACCCTGTCCTCGAGTTACTGTAGTACCGTTGCTGTTGTTTCTTCTA
GAGCGTCGACCCAGTGTGCAATGAAAGTCATGGTCACGTTGTGTCAAAGT
AAAGTTCTAGAGGTTCTTGCAAGGTAGTTAGTTTCCTGCTCGAACTTGTA
GATTGCAGCCCGAAAACCTCGAAGGCATGTATTTAGGTTGCGGCATACTA
AATACTGAACCCCTCATTTCCTGCTATTTTACATGATACAATCAGAGAAA
CAGGTGTAGGAGTATGCAGTATGACCAACTCTACTTGACCACCGCGTGAA
AATGGCCGCTAGTTATCGGGGTATTTCCGGGGGGGTTTTGCAGTTAAATT
ATTGGAAATGTGTCAGATGATCGATAATGTACCATATATTCCCTTGGACA
TGAACCTTTGTTGTGATGGTTTGACAAGACAGGCCGCACATCGGGGTATG
GTGAGCATCTGTGAGTTGGTAGTGGAGAATGGCGTGGACGTTGGTGCCAA
ATCTGATGATGGTATCACTGCCCTTATCGCTGCGGCTAGTGAGGGGCACG
CCGAAATCGTGGAGCTTTTGCTGGGGAAGACGGAAACGGACCCAGACGCA
AAGGACAAGGTATGCAGAGAATCCCGGTTCCTTATCAGTCTTGCGTTTAC
ATTTCACGGAAGAAGATGGATGGACATGGACAACAACATAGCCTGTTGCT
TAACAACGAATCCGTAGTAAGTTTATGTGCGTTGTTTCTTGTTGTACGCA
GCCCCTAAACCATGAATGGGGCAAAGAGTAGAGAGAGGATCCGAATTTTG
TAAGAATGACATGATTGCCTGTTGACCGCTTTCCAAGGGAGTTCTAATTT
TTTTATATCTGAATCAACCATGGGTGGTCGGAGGTAGGCACTCTGTTCTT
TTTTATCGAACATGCGTAATTGCTTCGGGGCTGCTGGAGTAATAATATCC
CAAGCAATGGATGGCTTCCTTGACCCGGTCAAATTATTATCTCATAATTT
CTGCACACATGACTCATTTACGCTTCGCTTTAGCCTGGTGACCTTTATCG
GTAATTACGGATTCGCTACATTGTTGTCACGATCACGAATCACTTTCTCA
CAGGACGGTACAACAGCGTTGATGGCAGCATCTGTTCGGGGGCATAAGGC
AGCGGTCGATGCCATCGTGAAACATGGAGCTAACGTTGACCAGCAAAACC
TAGACGGCCATACAGCTCTCATGTTTGCTTACAACGGAAGGAATCAGGTG
ATGTGACAGCAGAGTAATAGATTGATAGATTAATCGGTCGCTCCAACGAA
TCTGTCACACTCACACTTACACGTGATACCTAACGTGGTAAGGGCTATGC
TGCTCTCCCTGTGTATATACGTGTGCGGGAGCAGTCAGGGTGTCGTGTTC
ACTGTTGCGTTCATGTGCAGATTGAAGTCGAGCAAGATTATTAGGCCTAA
CTAACACCCGCTTGGTGAATCATTCATCGAATTCTACTATGATTGATGTA
CGCAGGTTGCTGCGTTGCTGTCTCGATACTTGGAGTATGTTGGAGGAAAA
GAGGATGACGTGAACGCCAAGATAATTCGAGATTCCCTTCAGGTGCGTGA
CAGTACAGGTTACACCCTTGACGGCTCAATGTGGGAATATGTTTATTGTC
ATCGTACGACACAACTGTGTTGTCGCGAAATGGAAATAATTTGTTGGAAT
GCCCCTTCGAGACCGTTTGTTCGTGCTCTATACAAGTATGTTGTGTGTGT
GTGTGTGTTTTTTTTTATCCCCCGGAAGGCTAAGGCAAAACCTTTATCCG
ATGCTTCCATACCGAAGTATTTCTACCGAAGTATTTCTACATTTCCTTTA
ACAGAACAGAGTTATTTATTCCTCTGCGGGGTAGGCGCCACCCCGGTTCG
GCCGAACCAGGTAGGTAGTAGTGTGGGGGTTGGTTGTACCCACTGAAAGA
CCTCTGACTAGACTTCCAGTCAAGCTCAGTTCACGAGCTACCCTACCCGT
TCGGGCGTAGGTCCCGTGTACATGTGTGTTTCTGCTGTTGTAAATCGTTG
CAGCCTGATGCGTTATTAATGTAGAGAAAGAGGATCGCAGCATAGGTCAT
TCCAATCCCCCCAAACCGTTTCGTCTTCCTTCTATTCTAATATTATCTTA
CCAGGTTCACACAAACATCATAGCTGCGCTTAAGGCATCAGGAGCAGATC
CTAGTATTGTAGACAAAGATGGCCATTCGGCCCAAGACTACGAAGACTTG
GACTCGCAACACGAGGACAAGAAATTGGGGGGGCATAAAGAGACAGCAGG
AAATAAAATTGAAGGCGTTGGGGGATCAGGGAGCGGGGCTGGGCGATTGG
ATCCCCCACGGTCAAGACCAGGAGCGTCTCCGTCTCCATTTCCATCGCCT
GGAAACAGGAGAGACGAGCTGTAGGTGCTCGTTGATCGTGTTCAAATTGA
AATATAGAGAAAAATATTAAAAGTACATATTTACATTACGATACGTCATG
TTGCAAGAGGCGAGCACGGGGGGGTTAGTTATACTATACTTCTTTAGTCA
GCTTGTGGGGAGCGTGATTGGCAGGTATTGATTTTCGAAACAGGTTCAAA
GCAGCGGTTCTATAGGTTGCTATGGGGTGAGGTAGTCAATCATAAATCGT
GCCCCATGTCAGATCATTCCATAGGGAGAGCCGACGCCGTTCGTTCGCAT
TTTCTGAGCAAGGCCCAGGCTTGCGTAAAATGGCACAAGGTGGCCAAGCA
GCAGCTAGTACCACAAGTGCACTGCTGTATGTGACCCGTGGTATGTTGGA
AATGCCTTTCTTTTTTGACAAGGTAGTGTCGCACCATGTCTATGGAATAT
GTATTTCATGGATCACGTATTCAGTATATGTTGGTGATAGTACACGGATA
TATGTGTGCACGGAGAGAAGATCCACTCCGTCCATTTTGATTTTGATGCT
TGAAGCAGGTAGATGTTGCTCATGTACCTGGACGCATTCGAGTTTATTCC
ACCACGTGTATTGCACCTAATTTGAAGATAACAGTTTTGTCGTTGATTTG
CTCCCGTCAGTGACAGTGTCGGCGTTGATAAGTTCTTCATATATTGTACG
CTGCCGATAGATGTAATCGAGACATAGCCGGGAAAGGATGATATGTTGGA
GTTTTTTTATTTTGATCCTTTTCCACAATGGGACAAGCACAATATTGTCC
AAGAAAGTGATGCCGTGTGTATTCTGGATGTGTTTCGTGTAATGGTGGTA
TAGAACCATAGTGCAATAATGCGACTCGGCCTTTCTGCCCTGCAAAGTGA
CTCCCGAACGAAATTCGTGAGAGTGTTGTGCCATTTCCTTTTACTTATAT
CACACACCTCGGAGAGAAGAAGCAAACGTACCTTGGTCACATCGAGCAGA
GGAGAGAAGGATCCATTTGTAACTTTTTTTTCTTCAGTTGTGACTTATTA
TCGATTAACGATGTCATTCTGGTTTGTAAACAACGTGCGTATGCTTATTT
CGAATAGTACATTCGTCGGTGTAAGGCGCTACCACTATGCCACATGCGTA
CGTCCTACGGATGTAACCATTCATCAATGTACAGGGGGGAACAATCCTGT
ATCGTACCT
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Coding sequence (CDS) from alignment at H-paniculata_contig6523:7530..12438-

>mRNA_H-paniculata_contig6523.14375.1 ID=mRNA_H-paniculata_contig6523.14375.1|Name=mRNA_H-paniculata_contig6523.14375.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1566bp|location=Sequence derived from alignment at H-paniculata_contig6523:7530..12438- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATGCCATTATCGTGGAAAACGTTCCTTTCGCGGAATTGCTGGTGAA
GCATGGGGCTAATGTGAACGTTACGGACGAGCAAGGGGTGACCACCTTGA
TACAGATGGATGCCATTATCGTGGAAAACGTTCCTTTCGCGGAATTGCTG
GTGAAGCATGGGGCTAATGTGAACGTTACGGACGAGCAAGGGGTGACCAC
CTTGATACAGGCCGCACATCGGGGTATGGTGAGCATCTGTGAGTTGGTAG
TGGAGAATGGCGTGGACGTTGGTGCCAAATCTGATGATGGTATCACTGCC
CTTATCGCTGCGGCTAGTGAGGGGCACGCCGAAATCGTGGAGCTTTTGCT
GGGGAAGACGGAAACGGACCCAGACGCAAAGGACAAGGCCGCACATCGGG
GTATGGTGAGCATCTGTGAGTTGGTAGTGGAGAATGGCGTGGACGTTGGT
GCCAAATCTGATGATGGTATCACTGCCCTTATCGCTGCGGCTAGTGAGGG
GCACGCCGAAATCGTGGAGCTTTTGCTGGGGAAGACGGAAACGGACCCAG
ACGCAAAGGACAAGGACGGTACAACAGCGTTGATGGCAGCATCTGTTCGG
GGGCATAAGGCAGCGGTCGATGCCATCGTGAAACATGGAGCTAACGTTGA
CCAGCAAAACCTAGACGGCCATACAGCTCTCATGTTTGCTTACAACGGAA
GGAATCAGGACGGTACAACAGCGTTGATGGCAGCATCTGTTCGGGGGCAT
AAGGCAGCGGTCGATGCCATCGTGAAACATGGAGCTAACGTTGACCAGCA
AAACCTAGACGGCCATACAGCTCTCATGTTTGCTTACAACGGAAGGAATC
AGGTTGCTGCGTTGCTGTCTCGATACTTGGAGTATGTTGGAGGAAAAGAG
GATGACGTGAACGCCAAGATAATTCGAGATTCCCTTCAGGTTGCTGCGTT
GCTGTCTCGATACTTGGAGTATGTTGGAGGAAAAGAGGATGACGTGAACG
CCAAGATAATTCGAGATTCCCTTCAGGTTCACACAAACATCATAGCTGCG
CTTAAGGCATCAGGAGCAGATCCTAGTATTGTAGACAAAGATGGCCATTC
GGCCCAAGACTACGAAGACTTGGACTCGCAACACGAGGACAAGAAATTGG
GGGGGCATAAAGAGACAGCAGGAAATAAAATTGAAGGCGTTGGGGGATCA
GGGAGCGGGGCTGGGCGATTGGATCCCCCACGGTCAAGACCAGGAGCGTC
TCCGTCTCCATTTCCATCGCCTGGAAACAGGAGAGACGAGCTGTAGGTTC
ACACAAACATCATAGCTGCGCTTAAGGCATCAGGAGCAGATCCTAGTATT
GTAGACAAAGATGGCCATTCGGCCCAAGACTACGAAGACTTGGACTCGCA
ACACGAGGACAAGAAATTGGGGGGGCATAAAGAGACAGCAGGAAATAAAA
TTGAAGGCGTTGGGGGATCAGGGAGCGGGGCTGGGCGATTGGATCCCCCA
CGGTCAAGACCAGGAGCGTCTCCGTCTCCATTTCCATCGCCTGGAAACAG
GAGAGACGAGCTGTAG
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