mRNA_H-paniculata_contig6521.14374.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Match: A0A6H5KQZ1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ1_9PHAE) HSP 1 Score: 570 bits (1470), Expect = 1.140e-177 Identity = 377/707 (53.32%), Postives = 439/707 (62.09%), Query Frame = 1
Query: 304 RRRHHCRCCGEVVCDKCSPTKVTIPVSDVDYHRPRRACGPCAAHLAAGDFSCPARYAVVIAARGADMYHKQGAVRHLSAAMEAAAKKRRXXXXXXXXXXAGVAGRDQVGAGRIVEPLAALQGVHGGARAVFNAMVPMLSTEVPLDVCAHACQLLGASLFVASRSTRGPEAWVQLAVAVPDGVVDGLLECLSVAPARARAARTLFYAASVPMPNGTGGQSIASRGGVPLILEVLSSLPTGPIAMPMATAFSSSAGGGAPVNMPAAAGSLRMWLCATLQPLLSGRPSAKQAFLSSGGISILCRHLAAGPEDVAVHACGVLTSVLGQGGGXXXXXXXXXXXXXXXXXXXXXXAP------AGSRGNGTYAAALVMELLVILARSPKLTRQLERAGTIPTVVAWLE--PVADSKL-DTTTRSSLVQNALIVLASMVRVSGEQ---------DDVISEMAAVRAEVSAITLLGPSTSDTVVRYLAAEFLLEISRRCPPAPXXXXXXXSPTSTNGDIAESIIEAGGLGALWNLCTYPPQMESPIALAALATILGTAAAMSRSATASAAVLALVSDGAVGRLAREHLEPALAVLAACAPEARHQPRGED----GDNAIA-----FATSTLLALHNLAVNPDPAIHGLFLAVVGVDR--GVGTTRTENRSAWNVILSSVEAGADGDAGSAFLEVALLAAGSVCGAPPLPSFGGGG 2337
R RHHCRCCGEVVC CSPTK+ I VS+ Y RPRRAC CAAH+AAG++SC ARYA+ IA GAD YHKQ AVRHLSAAME AAKK XXXXXXXX + PL+A+Q VHGG AVF A+VPM+STEVPLDVC HACQLLGASLFVASR + P+ WV L +P+G VDGLLECL VAPARA+AAR LFYAA VP+ GTGG+ I SRGGV ++LEVL SLP P P LR+WLCATLQP+++ RP A QAFL+ GI +LCR L AGP D+AVH CGVL S L G XXXXXXX AG +A+AL MELLV+LA P + +L AGTIP V A LE P + + TR+SL+Q ALIVL +R G+Q D++ +E+AA RA V + LL S D +R+ AE L++SRRC P P S G IA+ +IEAGGLGALW C+ P M P+AL ALA +LGTAAAMSRS +S AVLALVS+GAV L R+H++PAL+VL R G GD A A ATS LLALH LA NPDPA+HGLF+ GVD S W+ ILSSVEAGA+G G AFLE ALLAAGSVCGAPPLP G GG
Sbjct: 7 RWRHHCRCCGEVVCATCSPTKLLIHVSEPGYERPRRACQTCAAHIAAGEYSCNARYALAIATPGADTYHKQAAVRHLSAAMEDAAKKTVQSXXXXXXXXXXXX--------XVRGPLSAIQRVHGGTPAVFEALVPMMSTEVPLDVCTHACQLLGASLFVASRQSS-PKTWVDLVKVIPEGGVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSIMLEVLESLPLAP-----------------PPTAAVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLVAGPADIAVHVCGVLASALRSGXXXXXXXXXAAVPRSAIEAVDASIIDPLLGMLAGGTSKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAAEPVTRASLMQLALIVLTGFLRGDGDQPAAAAEAKVDEIAAEIAATRAHVRVVALL--SAPDPKLRFTTAELALQLSRRCRPGPAPN----SNRGGGGGIAKDMIEAGGLGALWRACSDPSPMARPVALEALAAMLGTAAAMSRSRASSEAVLALVSEGAVEGLVRQHVDPALSVLGR---RGRGVAGGGSATIPGDAAAAATXXXVATSALLALHFLAANPDPAVHGLFVVAAGVDEQXXXXXXXXXXSSTWSTILSSVEAGAEGRGGPAFLEAALLAAGSVCGAPPLPVLGVGG 678
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Match: D7FT64_ECTSI (E3 ubiquitin-protein ligase Nedd-4, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT64_ECTSI) HSP 1 Score: 542 bits (1396), Expect = 5.190e-167 Identity = 330/618 (53.40%), Postives = 394/618 (63.75%), Query Frame = 1
Query: 220 ESETFSPHLIPDDDRTQCAVCKERFAALRRRHHCRCCGEVVCDKCSPTKVTIPVSDVDYHRPRRACGPCAAHLAAGDFSCPARYAVVIAARGADMYHKQGAVRHLSAAMEAAAKKRRXXXXXXXXXXAGVAGRDQVGAGRIVEPLAALQGVHGGARAVFNAMVPMLSTEVPLDVCAHACQLLGASLFVASRSTRGPEAWVQLAVAVPDGVVDGLLECLSVAPARARAARTLFYAASVPMPNGTGGQSIASRGGVPLILEVLSSLPTGPIAMPMATAFSSSAGGGAPVNMPAAAGSLRMWLCATLQPLLSGRPSAKQAFLSSGGISILCRHLAAGPEDVAVHACGVLTSVLGQGG-GXXXXXXXXXXXXXXXXXXXXXXAP-----AGSRGNGTYAAALVMELLVILARSPKLTRQLERAGTIPTVVAWLEP-----VADSKLDTTTRSSLVQNALIVLASMVRVSGEQ----------DDVISEMAAVRAEVSAITLLGPSTSDTVVRYLAAEFLLEISRRCPPAPXXXXXXXSPTSTNGDIAESIIEAGGLGALWNLCTYPPQMESPIALAALATILGTAAAMSRSATASAAVLALVSDGAVGRLAREHLEPALAVL 2010
E FSPHLIPDDDR+QC+VC ERFAALRRRHHCRCCGE+VC CSPTK+ + VS+ Y RPRRAC CAAH+AAG++SC +RYA+ IA GADMYHKQ AVRHLSAAME AAK ++ PL+A+Q VHGG AVF A+VPM+STEVPLDVC HACQLLGASLFVASR + PE WV L +P+G VDGLLECL VAPARA+AAR LFYAA VP+ GTGG+ I SRGGV ++LEVL SLP P P LR+WLCATLQP+++ RP A QAFL+ GI +LCR LAAGP D+AVH CGVL S L GG G P AG +A+AL MELLV+LA P + +L AGTIP V A LE A + + R+SL+Q ALIVL +R G+Q D+V +E+AA RA V + LL S D +R+ AAE L++SRRC P P XXXXXX IA+ +IEAGGLGALW+ C+ P M P+AL ALA +LGTAAAMSRS+ +S AVLALVS+GAVG L R+H++PAL+VL
Sbjct: 145 EDIAFSPHLIPDDDRSQCSVCGERFAALRRRHHCRCCGELVCATCSPTKLLMHVSEPGYERPRRACQTCAAHIAAGEYSCNSRYALAIATPGADMYHKQAAVRHLSAAMEDAAKN--------AVKSGXXXXXXXXXXXXVLGPLSAIQRVHGGTPAVFQALVPMMSTEVPLDVCTHACQLLGASLFVASRQSS-PETWVGLVKVIPEGCVDGLLECLRVAPARAKAARALFYAAKVPLAGGTGGELIESRGGVSIMLEVLESLPLAP-----------------PPTAAVETKGLRVWLCATLQPVMADRPRAVQAFLACRGIPLLCRQLAAGPADIAVHVCGVLASALRSGGAGAGAGSSAAVPRSAIETVDASIIDPLLGMLAGGTNKDAHASALAMELLVVLASHPPFSGRLRAAGTIPAVAACLEDHPARGAAAAAAEPVARASLMQLALIVLTGFLRGDGDQPAAVAATGEVDEVAAEIAATRAHVRVVALL--SAPDPKLRFTAAELALQLSRRCRPGPAXXXXXXX---XXXGIAKDMIEAGGLGALWSACSDPSPMARPVALEALAAMLGTAAAMSRSSASSEAVLALVSEGAVGGLVRQHVDPALSVL 731
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Match: W7TC83_9STRA (Mitochondrial carrier family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TC83_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.450e-19 Identity = 94/355 (26.48%), Postives = 153/355 (43.10%), Query Frame = 1
Query: 238 PHLIPDDDRTQCAVCKERFA-ALRRRHHCRCCGEVVCDKCSPTKVTIPVSDVDYHRP------RRACGPCAAHLAA-GDFSCPARYAVVIAA--RGADMYHKQGAVRHLSAAMEAAAKKRRXXXXXXXXXXAGVAGRDQVGAGRIVEPLAALQGVHGGARAVFNAMVPML-STEVPLDVCAHACQLLGASLFVASRSTRGPEAWVQLAVAVPDGVVDGLLECLSVAPARARAARTLFYAASVPMPNGTGGQSIASRGGVPLILEVLSSLPTGPIAMPMATAFSSSAGGGAPVNMPAAAGSLRMWLCATLQPLLSGRPSAKQAFLSSGGISILCRHLAAGPEDVAVHACGVLTSVL 1269
P +PD R+ C +C+ +F +R RHHCRCCGE+VCDKCS K+ +P + + R C C AH+A G+F C RY + A + + A+R L A+E + + V G AA GGA A+ A+ P+L + PL V A LG L + ++ ++ G++ +L+ L + AAR ++YAAS P+ T Q+ A P +L++L+S G ++ W+ A+++PL++G + L+SG + +L L + DV HA +++V+
Sbjct: 205 PFYVPDSMRSGCFLCQVKFQLVVRGRHHCRCCGEIVCDKCSQGKLALPREHESFKKGAGGELGHRVCDHCHAHVATHGNFRCMVRYVTTLRAGKEASTAAQRYVALRLLVEALEPSTHW-----------------KGDVNLGNDAAQKAADLETSGGAPAICQALAPLLDAATAPLPVQEMALIALGHVLTLTAQQPALKSSYAAHLANESPGILPRVLDALDEPALQEHAARVIYYAASEPVCQKTLRQASAW----PRVLDLLTSPAEG----------------------------VQRWVAASVRPLVAGNRALLDYLLTSGALFVLGSLLCSDLPDVQAHALSAISAVI 510
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Match: A0A4D9CRT6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRT6_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.490e-18 Identity = 91/355 (25.63%), Postives = 151/355 (42.54%), Query Frame = 1
Query: 238 PHLIPDDDRTQCAVCKERFA-ALRRRHHCRCCGEVVCDKCSPTKVTIPVSDVDYHRP------RRACGPCAAHLAA-GDFSCPARYAVVIAA--RGADMYHKQGAVRHLSAAMEAAAKKRRXXXXXXXXXXAGVAGRDQVGAGRIVEPLAALQGVHGGARAVFNAMVPML-STEVPLDVCAHACQLLGASLFVASRSTRGPEAWVQLAVAVPDGVVDGLLECLSVAPARARAARTLFYAASVPMPNGTGGQSIASRGGVPLILEVLSSLPTGPIAMPMATAFSSSAGGGAPVNMPAAAGSLRMWLCATLQPLLSGRPSAKQAFLSSGGISILCRHLAAGPEDVAVHACGVLTSVL 1269
P +PD R+ C +C+ +F +R RHHCRCCGE+VCDKCS K+ +P + + R C C AH+A G+F C RY + A + + A+R L A++ + + V G AA GGA A+ A+ P+L + PL V A LG L + ++ ++ G++ +L+ L + AAR ++YAAS P+ T + P +L++L+S G ++ W+ A+++PL++G + L+SG + +L L + DV HA +++V+
Sbjct: 205 PFYVPDSMRSGCFLCQVKFQLVVRGRHHCRCCGEIVCDKCSQGKLVLPREHESFKKGPGGELGHRVCDHCHAHVATHGNFRCMVRYVTTLRAGKEASTAAQRYVALRLLVEALDPSTHW-----------------KGDVNLGNDAAQKAADLETSGGAPAICQALAPLLDAATAPLAVQEMALIALGHVLTLTAQQPALKSSYAAHLANESPGILPRVLDALDEPALQEHAARVVYYAASEPVCQKT----LRHVSAWPRVLDLLTSPTEG----------------------------VQRWVAASVRPLVAGNRALLDYLLTSGALFVLGSLLCSDLPDVQAHALSAISAVI 510
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Match: A0A7S2CFT2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CFT2_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.070e-9 Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 220 ESETFSPHLIP---------DDDRTQCAVCKERFAALRRRHHCRCCGEVVCDKCSPTKVTIPVSDVDYHRPRRACGPCA 429
+ ++F P IP DD +C+ CKE F+ +RRRHHCR CG++ CD C+P + +PV + + P+R C PCA
Sbjct: 23 QEQSFVPTKIPLMQKSSWVHDDAVEECSSCKEEFSLIRRRHHCRLCGQIFCDDCTPQRKLLPV-EYELSAPQRVCDPCA 100
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Match: UPI00148A1A0F (FYVE, RhoGEF and PH domain-containing protein 4 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A1A0F) HSP 1 Score: 69.7 bits (169), Expect = 1.290e-9 Identity = 30/64 (46.88%), Postives = 39/64 (60.94%), Query Frame = 1
Query: 235 SPHLIPDDDRTQCAVCKERFAALRRRHHCRCCGEVVCDKCSPTKVTIPVSDVDYHRPRRACGPC 426
+PH I DD+ + C +C + F AL+RRHHCR CG VVC KCS K + D ++P R C C
Sbjct: 12 APHWIKDDEVSVCQLCSKSFTALKRRHHCRACGRVVCRKCSSKKSNLAY---DNNKPNRVCDKC 72
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Match: A0A7S4KLQ6_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KLQ6_9EUKA) HSP 1 Score: 66.6 bits (161), Expect = 1.410e-9 Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 217 EESETFSPHLIPDDDRTQCAVCKERFAALRRRHHCRCCGEVVCDKCSPTKVTIPVSDVDYHRPRRACGPC 426
+E+ T +P+ PD + C C RF+ ++RRHHCR CG++ CD CS +V++P ++ + P+R+C C
Sbjct: 44 QENVTQAPNWQPDRESASCTKCGARFSLMKRRHHCRKCGDIFCDDCSYFRVSLP--ELGFTNPQRSCERC 111
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Match: A0A5D6XFE7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFE7_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.330e-9 Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 1
Query: 232 FSPHLIPDDDRTQCAVCKERFAALRRRHHCRCCGEVVCDKCSPTKVTIPVSDVDYHRPRRACGPCAAHLAAGDF 453
F+P L+ DD C C +F LRRRHHCR CG C +C+P KV +P+ Y + C C ++ GDF
Sbjct: 253 FAPILVRDDAAIGCFQCSNKFGVLRRRHHCRLCGNAFCAECTPNKVNLPIDGPGYEQKLPVCQRCFRNVETGDF 326
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Match: W4H1A6_9STRA (FYVE-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H1A6_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 5.510e-9 Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 241 HLIPDDDRTQCAVCKERFAALRRRHHCRCCGEVVCDKCSPTKVTI-PVSD 387
H IPDD RT CA+C ERF+ R +HHCR CG+VVC C KV + P +D
Sbjct: 19 HWIPDDARTTCAMCNERFSLFRHKHHCRTCGDVVCMDCVTKKVAVSPTAD 68
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Match: A0A8H6VJP8_9PEZI (Zinc finger FYVE domain-containing protein 21 n=1 Tax=Pseudocercospora fuligena TaxID=685502 RepID=A0A8H6VJP8_9PEZI) HSP 1 Score: 70.5 bits (171), Expect = 7.310e-9 Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 184 GWTKGRAAESFEESETFSPHLIPDDDRTQCAVCKERFAALRRRHHCRCCGEVVCDKCSPTKVTIP 378
G G AA ES+ P PD++ T+C VC F+ L RRHHCR CG VVC++CSP ++TIP
Sbjct: 127 GGPGGGAAFGRRESDIVLPRWQPDNEVTKCPVCDTEFSLLYRRHHCRKCGRVVCNRCSPHRITIP 191 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6521.14374.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6521.14374.1 >prot_H-paniculata_contig6521.14374.1 ID=prot_H-paniculata_contig6521.14374.1|Name=mRNA_H-paniculata_contig6521.14374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=780bp QADPHAASKPTINTRNSSGGSPRRRWATSPKRRSTMPSSMASADASGSGGback to top mRNA from alignment at H-paniculata_contig6521:4184..10817+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6521.14374.1 ID=mRNA_H-paniculata_contig6521.14374.1|Name=mRNA_H-paniculata_contig6521.14374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6634bp|location=Sequence derived from alignment at H-paniculata_contig6521:4184..10817+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6521:4184..10817+ >mRNA_H-paniculata_contig6521.14374.1 ID=mRNA_H-paniculata_contig6521.14374.1|Name=mRNA_H-paniculata_contig6521.14374.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4680bp|location=Sequence derived from alignment at H-paniculata_contig6521:4184..10817+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |