prot_H-paniculata_contig652.14372.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig652.14372.1
Unique Nameprot_H-paniculata_contig652.14372.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length629
Homology
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BLAST of mRNA_H-paniculata_contig652.14372.1 vs. uniprot
Match: D7G205_ECTSI (HMMR_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G205_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.720e-31
Identity = 142/469 (30.28%), Postives = 213/469 (45.42%), Query Frame = 0 
Query:    3 ELRDANDQLAAAAADAVGVERKLAESEGECQRFEGRLHEAILEVTRLTERIAVKEADAKARRQSLANDIAKRGAKEERGKQLEKDVHKKDKVCAELRDMLKSSMEAVNAAAARTQVLEKGLKDSEVEAARLKIAVEIRDAKIDGATITVAEQAVXXXXXXXXXXXXXXXXXXXXGQHVRILRAVDDIEASHESDNGTNVQLKKSLADIHGMGMELGDKLAVVILERMEALAKVEVANSALEASSAGMRTLERDLEISEARVK----EAEEERNTCIKERDALLDECKRGAAVLLAKSEAQAQELVARLQLHEAKSAQEILVVKNQAEQSRAEACALSAELEELQGMAQEVHRAQTEEYRAVREAGFAQLQVQKLASENAVLAGQNSNKQRTKHMEDLKKQNMKLSSESASLVSELALATSVLEAIGLLPKEEAEDVTTPLGKVLEDDDSMETRSRGILSRMASGANSMS 467
            EL  A   L   A D V +ER+L E+E  C+R    +    LE   ++E++A  E  A A  +SLA     RGA   R  +L+ +     + CA LR+  +                                AV  ++A ++ A++                            + V + R ++D+EA H + NG   +L +  A  HG+G  LG+KL  V+ E+ +   K+E A  AL +S A    L+ ++E +E+ V+    E +E R  C                      EA  +   A  +L EA                       SAE+ EL+   + ++RAQTE   A+REAG A   VQ+LASENA L G N+NKQ+ KH+++LKK++++L +E A   S+LALA +VLEA+G+LPKE     T  + K          R RG+ SR +SGANS+S
Sbjct:  632 ELAAAQKALNTGAEDFVALERRLCEAEMTCERLRSGVEATELE---MSEQLAASEVVAAALGESLAEAAEGRGAAAARADRLQSEADGVARECAALREEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEKEACLEKASVAADRHRAEATRRE--------------AEFVGLRRVLEDVEAGHSAKNGEGSKLGRGSAGTHGIGAALGEKLISVVEEKRDVQGKLEAAEGALSSSEADRERLKLEVEANESAVEGLRGEIDESRLEC----------------------EALQKAKCAMSKLEEA-----------------------SAEMTELKASCEGMYRAQTEGSNALREAGLANRNVQRLASENAALVGHNNNKQKIKHLQNLKKESIRLQNEKARQASDLALAIAVLEAVGVLPKEAGTTSTAVVAK---------RRGRGLHSRRSSGANSLS 1029
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig652.14372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G205_ECTSI1.720e-3130.28HMMR_C domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 292..312
NoneNo IPR availableCOILSCoilCoilcoord: 392..412
NoneNo IPR availableCOILSCoilCoilcoord: 249..283
NoneNo IPR availableCOILSCoilCoilcoord: 334..354
NoneNo IPR availableCOILSCoilCoilcoord: 4..45
NoneNo IPR availableCOILSCoilCoilcoord: 158..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig652contigH-paniculata_contig652:21674..27372 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig652.14372.1mRNA_H-paniculata_contig652.14372.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig652 21091..32225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig652.14372.1 ID=prot_H-paniculata_contig652.14372.1|Name=mRNA_H-paniculata_contig652.14372.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=629bp
MEELRDANDQLAAAAADAVGVERKLAESEGECQRFEGRLHEAILEVTRLT
ERIAVKEADAKARRQSLANDIAKRGAKEERGKQLEKDVHKKDKVCAELRD
MLKSSMEAVNAAAARTQVLEKGLKDSEVEAARLKIAVEIRDAKIDGATIT
VAEQAVKIDTANATVAEQAAKIADLEGQHVRILRAVDDIEASHESDNGTN
VQLKKSLADIHGMGMELGDKLAVVILERMEALAKVEVANSALEASSAGMR
TLERDLEISEARVKEAEEERNTCIKERDALLDECKRGAAVLLAKSEAQAQ
ELVARLQLHEAKSAQEILVVKNQAEQSRAEACALSAELEELQGMAQEVHR
AQTEEYRAVREAGFAQLQVQKLASENAVLAGQNSNKQRTKHMEDLKKQNM
KLSSESASLVSELALATSVLEAIGLLPKEEAEDVTTPLGKVLEDDDSMET
RSRGILSRMASGANSMSNSMSPPRRTLSCGVNFTSPQSDVRKHKILGRFG
RRPSQEERKGNIRSPSERSRLALQDRLLNALGSPPRTVKESPTSTHRRCA
TDPNDAAAGGSLMSMVGMAGKASDGIIAGPPPALGTVAGMGTDTAGSTCL
SLEDERVRAEVRKVLDAQTSNQVSVPLI*
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