prot_H-paniculata_contig65198.14370.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig65198.14370.1
Unique Nameprot_H-paniculata_contig65198.14370.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length37
Homology
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A6U0XHQ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XHQ1_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 5.670e-6
Identity = 19/35 (54.29%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    1 MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKV 35
            +VH+G+T+ SGHYYSY++  D  WY M+D +VS+V
Sbjct:  286 VVHQGMTVHSGHYYSYVKGTDGQWYLMNDSHVSRV 320          
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: UPI0010A370EF (ubiquitin carboxyl-terminal hydrolase 23 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A370EF)

HSP 1 Score: 49.7 bits (117), Expect = 7.720e-6
Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKV 35
            +VH G +  SGHYY Y+RTA+N WY +DD+ VS V
Sbjct:  353 LVHSGSSTHSGHYYCYVRTANNMWYTLDDNRVSHV 387          
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A834X400_9FABA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Senna tora TaxID=362788 RepID=A0A834X400_9FABA)

HSP 1 Score: 49.3 bits (116), Expect = 1.060e-5
Identity = 20/35 (57.14%), Postives = 25/35 (71.43%), Query Frame = 0
Query:    1 MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKV 35
            +VH G    SGHYY Y+RTA+N WY +DD+ VS V
Sbjct:  419 LVHSGSNTHSGHYYCYVRTANNMWYTLDDNRVSHV 453          
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A9V415_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V415_MONBE)

HSP 1 Score: 48.9 bits (115), Expect = 1.440e-5
Identity = 19/33 (57.58%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    1 MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVS 33
            +VH G ++QSGHYY Y+R ++N WY+MDD  VS
Sbjct:  459 LVHAGHSLQSGHYYCYVRNSNNIWYRMDDARVS 491          
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A1D1W2X0_RAMVA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1W2X0_RAMVA)

HSP 1 Score: 48.9 bits (115), Expect = 1.440e-5
Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    1 MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVS 33
            +VH G +  SGHYYS+IRTA N WY+MDD+ VS
Sbjct:  482 LVHSGGSCHSGHYYSFIRTAVNTWYRMDDNYVS 514          
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A2R6PCW9_ACTCC (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6PCW9_ACTCC)

HSP 1 Score: 48.9 bits (115), Expect = 1.450e-5
Identity = 19/36 (52.78%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVK 36
            +VH GL+  SGHYYS++R+A +AWY++DD  V++V+
Sbjct:  399 VVHTGLSSTSGHYYSFVRSARDAWYRLDDSKVARVQ 434          
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A484NM52_9ASTE (USP domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484NM52_9ASTE)

HSP 1 Score: 48.1 bits (113), Expect = 2.700e-5
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    1 MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVK 36
            +VH GLT+ SGHYY +I ++ N WYK DD  V++V+
Sbjct:  963 LVHIGLTLHSGHYYCFIHSSPNEWYKFDDSKVTRVQ 998          
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A328EA65_9ASTE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328EA65_9ASTE)

HSP 1 Score: 48.1 bits (113), Expect = 2.710e-5
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    1 MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVK 36
            +VH GLT+ SGHYY +I ++ N WYK DD  V++V+
Sbjct:  426 LVHIGLTLHSGHYYCFIHSSPNEWYKFDDSKVTRVQ 461          
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: UPI00125E4F70 (ubiquitin carboxyl-terminal hydrolase 20-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E4F70)

HSP 1 Score: 48.1 bits (113), Expect = 2.710e-5
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    1 MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVK 36
            +VH G +  SGHYY +IR+A +AWYK DD  VS+V+
Sbjct:  302 VVHNGFSSCSGHYYCFIRSASDAWYKFDDSKVSRVR 337          
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Match: A0A484KPL5_9ASTE (USP domain-containing protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KPL5_9ASTE)

HSP 1 Score: 48.1 bits (113), Expect = 2.720e-5
Identity = 19/36 (52.78%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    1 MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVK 36
            +VH GLT+ SGHYY +I ++ N WYK DD  V++V+
Sbjct:  237 LVHIGLTLHSGHYYCFIHSSPNEWYKFDDSKVTRVQ 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65198.14370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6U0XHQ1_9STRA5.670e-654.29Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI0010A370EF7.720e-657.14ubiquitin carboxyl-terminal hydrolase 23 n=1 Tax=P... [more]
A0A834X400_9FABA1.060e-557.14Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Senn... [more]
A9V415_MONBE1.440e-557.58Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A1D1W2X0_RAMVA1.440e-563.64Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Rama... [more]
A0A2R6PCW9_ACTCC1.450e-552.78Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Acti... [more]
A0A484NM52_9ASTE2.700e-552.78USP domain-containing protein n=1 Tax=Cuscuta camp... [more]
A0A328EA65_9ASTE2.710e-552.78Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Cusc... [more]
UPI00125E4F702.710e-555.56ubiquitin carboxyl-terminal hydrolase 20-like n=2 ... [more]
A0A484KPL5_9ASTE2.720e-552.78USP domain-containing protein n=1 Tax=Cuscuta camp... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 2..36
e-value: 9.5E-9
score: 35.1
NoneNo IPR availableGENE3D3.90.70.10coord: 1..37
e-value: 2.3E-11
score: 45.1
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..37
score: 11.55
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig65198contigH-paniculata_contig65198:82..192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig65198.14370.1mRNA_H-paniculata_contig65198.14370.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig65198 82..213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig65198.14370.1 ID=prot_H-paniculata_contig65198.14370.1|Name=mRNA_H-paniculata_contig65198.14370.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=37bp
MVHKGLTIQSGHYYSYIRTADNAWYKMDDHNVSKVKL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf