mRNA_H-paniculata_contig6519.14367.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Match: D7G7V5_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7V5_ECTSI) HSP 1 Score: 884 bits (2283), Expect = 6.500e-314 Identity = 461/764 (60.34%), Postives = 550/764 (71.99%), Query Frame = 1
Query: 7 ARPTPTYETPFTCEKEPWGARMLLPVKPRHPDVAGIATCRGTPLRSRRLRPPLRLSIVSYNVLADCNSVRVPHCPASVINWNRRREILLREIFSVRADILCLQDADFFHQWWCPQLINAGYDSLFKQRTCASGVFREGVIIAWKRDMFDLFRSGEVELNRLGEDEENRPLATKAAMSDDVALMVLLRPWQDAEYPSGVCVVCTQLHDEQTPLGDQVRSLQARGLTRTVEVFNADFHLPIVMCGTMNCLPSSSTYEILCRGVEAQDPAKPLPAGKPLVTPLSTSSVRIRWSPPPDDSEALSPPIDKYWILWVPGGSRFLAGESISIFESECLVYDLVETETGNVRTVQNPLRSFVVTGLSSGVAYEFRISAVNSLGRGPWGERSEPVRTPFLAGNDPEGKVLLSAASIKLLRERELVETRRRTEERVADPRAYELRKLVKVPGLVDLDFEKRHPFHSVSGLTPRYSDATLHPDLANARTDAGFPIIQAVTDVDSIASISTGGRRRRRGRRVKQGSNASVLTRDRDGERSYDTAGCLLEGLDDEPTAEFSPRGHATTTDGDSAGGWTRDTTLPDHCIPPGEE--RPT-------AAGEGKNGELQIYRTLTCGDPCSRLACLDVSGARNTRQTHALGLRSAYMTYWAGGEPAFTMLSDNLSGTVDFIFFSEQSLLPGEILSIPEMGDLVERDVRQTELVPNSGSWEPSEWNGDPAEEGFEGEWSPYLRENPKRTRHRIPNDIFPSNHLMLMANLYYSEPHCPSSWR 2271
AR TY+TPFT E EPWGAR L+ V+P HPD+ + R ++ LS+VSYNVLAD NSVRV +C +V +W RRRE+LL+EIFSVRAD+LCLQD D FHQWW PQL +AGYDSLFKQRT + + REGV+IAWKRD+FDLFRSGE+ELNRLGE EE+R LA KAA SD+VALM LLRPWQD+++PSG C+VCTQL +E+ +GD +R LQA GLTR+VE FN+DF LPIVMCGTMNC PSS TYEILCRG+EAQDPA+P P GKPLV P+STS+ R+RW P DDSE+LSP ID Y +LWVPGGSRFL GES+ E+ C+VYDLV+TE+G VR+ QNPLR+FVV+GLSSGVAYEFR+SA+NSLG+GPW ERSEPVR P +AGNDP KVLL AASIKLLR+REL + RRR EER+ADPRAYELRKLVKV GL+DL EK HPF SVSG+TPRY+DA LHPDLAN RTD GFP+I+A+ + ++S +TG +GL D+ + +TT + G R T + GE RPT A G + E + R L L+VSGAR+ RQ HALGLRSAYMT+ +GGEPAFTMLSD + GTVD+IFFS LLP ++LSIPEMG LV RD++QTEL P G W PSEW G+ EE + GEWSPYLRENP R +HRIPN++FPS+HLMLMANL Y EP C S+WR
Sbjct: 11 ARADRTYDTPFTRETEPWGARTLVSVQPHHPDIPAVDHRSDVKFRRKQT-----LSVVSYNVLADSNSVRVRNCAPAVTSWGRRREVLLKEIFSVRADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRLGEHEEDRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQAHGLTRSVEAFNSDFSLPIVMCGTMNCAPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWPAPSDDSESLSPAIDTYRLLWVPGGSRFLPGESVDAHEAGCVVYDLVKTESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEPVRMPQMAGNDPVDKVLLGAASIKLLRKRELEDARRRAEERLADPRAYELRKLVKVEGLLDLGMEKIHPFGSVSGVTPRYTDAALHPDLANVRTDTGFPVIKAIEE-RRLSSGATGXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXKGLLDDDLSSLEDASASTTGGFRNGSGEGRSDTS---GVDTGESVTRPTKSLLPPKACGSSQREENILLR----------LDSLNVSGARSERQKHALGLRSAYMTHSSGGEPAFTMLSDTMVGTVDYIFFSADCLLPTQVLSIPEMGSLVRRDIQQTELSPAPGLWAPSEWQGECGEERYMGEWSPYLRENPLRVKHRIPNELFPSDHLMLMANLVYFEPRCSSTWR 753
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Match: A0A6H5L283_9PHAE (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L283_9PHAE) HSP 1 Score: 684 bits (1766), Expect = 6.460e-238 Identity = 357/607 (58.81%), Postives = 427/607 (70.35%), Query Frame = 1
Query: 481 NRLGEDEENRPLATKAAMSDDVALMVLLRPWQDAEYPSGVCVVCTQLHDEQTPLGDQVRSLQARGLTRTVEVFNADFHLPIVMCGTMNCLPSSSTYEILCRGVEAQDPAKPLPAGKPLVTPLSTSSVRIRWSPPPDDSEALSPPIDKYWILWVPGGSRFLAGESISIFESECLVYDLVETETGNVRTVQNPLRSFVVTGLSSGVAYEFRISAVNSLGRGPWGERSEPVRTPFLAGNDPEGKVLLSAASIKLLRERELVETRRRTEERVADPRAYELRKLVKVPGLVDLDFEKRHPFHSVSGLTPRYSDATLHPDLANARTDAGFPIIQAVTD----------VDSIASISTGGRRRRRGRRVKQGSNASVLTRDRDGERSYDTAGCLLEGLDDEPTAEFSPRGHATTTDGDSAGGWTRDTTLPDHCIPPGEERPTAAGEGKNGELQIYRTLTCGDPCSRLACLDVSGARNTRQTHALGLRSAYMTYWAGGEPAFTMLSDNLSGTVDFIFFSEQSLLPGEILSIPEMGDLVERDVRQTELVPNSGSWEPSEWNGDPAEEGFEGEWSPYLRENPKRTRHRIPNDIFPSNHLMLMANLYYSEPHCPSSWR 2271
++LGE EENR LA KAA SD+VALM LLRPWQD+++PSG C+VCTQL +E+ +GD +R LQARGLTR+VE FN+DF LPIVMCGTMNC+PSS TYEILCRG+EAQDPA+P P GKPLV P+STS+ R+RWS P D SE+LSP ID Y +LWVPGGSRFL GE++ E+ C+ YDLV+ E+G VR+ QNPLR+FVV+GLSSGVAYEFR+SA+NSLG+GPW ERSEPVR P +AGNDP +VLL AASIKLLR+REL + RRR EER+A+PRAYELRKLVKV GL+DL EK HPF SVSG+TPRY+DA+LHPDLAN RTD GFP+I+A+ + G + ++ V + G D C L+G T G S G T P P P A G E + R L LDVSGAR+ RQ HALGLRSAYMT+ +GGEPAFTMLSD + GTVD+IFFS LLP ++LSIPEMG LV RD++QT+L P G W PSEW G+ EEG+ GEWSPYLRENP R +HR+PN+IFPS+HLMLMANL Y EP C S+WR
Sbjct: 8 DQLGEHEENRSLAGKAATSDNVALMTLLRPWQDSDHPSGACIVCTQLSEEEGYIGDAIRGLQARGLTRSVEAFNSDFSLPIVMCGTMNCVPSSGTYEILCRGIEAQDPARPGPPGKPLVEPISTSAARVRWSAPSDYSESLSPAIDTYRLLWVPGGSRFLPGETVDAHEAGCVEYDLVKAESGRVRSEQNPLRAFVVSGLSSGVAYEFRVSAINSLGQGPWSERSEPVRMPQMAGNDPVDRVLLGAASIKLLRKRELEDARRRAEERLANPRAYELRKLVKVEGLLDLGMEKIHPFGSVSGVTPRYTDASLHPDLANVRTDTGFPVIKAIEERRMXXXXXXXXXXXXXXXXXXXXXXAGSHQTRSNDEQVTSSSTKGPLDDDLCTCSLDGASASTTTGGFRNGSGEGRSDTSGAGAGESVTRPTKSSLP----PKACGSFPREENILLR----------LESLDVSGARSERQKHALGLRSAYMTHSSGGEPAFTMLSDTMVGTVDYIFFSADCLLPTQVLSIPEMGSLVGRDIQQTDLSPVPGLWAPSEWQGECGEEGYMGEWSPYLRENPLRVKHRVPNEIFPSDHLMLMANLLYFEPRCSSTWR 600
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Match: A0A6H5L276_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L276_9PHAE) HSP 1 Score: 210 bits (534), Expect = 3.020e-60 Identity = 102/162 (62.96%), Postives = 124/162 (76.54%), Query Frame = 1
Query: 7 ARPTPTYETPFTCEKEPWGARMLLPVKPRHPDVAGIATCRGTPLRSRRLRPPLRLSIVSYNVLADCNSVRVPHCPASVINWNRRREILLREIFSVRADILCLQDADFFHQWWCPQLINAGYDSLFKQRTCASGVFREGVIIAWKRDMFDLFRSGEVELNRLG 492
AR TY+TPFT E EPWGAR L+ V+P HPD+ + + ++ R + LS+VSYNVLAD NSVRV +C +V +W RRRE+LL+EIFSVRAD+LCLQD D FHQWW PQL +AGYDSLFKQRT + + REGV+IAWKRD+FDLFRSGE+ELNR G
Sbjct: 11 ARADRTYDTPFTRESEPWGARTLVSVQPHHPDIPAVD--HRSDIKFGRKQT---LSVVSYNVLADSNSVRVRNCAPAVTSWGRRREVLLKEIFSVRADVLCLQDVDCFHQWWSPQLTSAGYDSLFKQRTSRAAMHREGVVIAWKRDVFDLFRSGEMELNRRG 167
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Match: W2QR66_PHYPN (Fibronectin type-III domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QR66_PHYPN) HSP 1 Score: 203 bits (517), Expect = 5.690e-53 Identity = 122/348 (35.06%), Postives = 184/348 (52.87%), Query Frame = 1
Query: 166 RLSIVSYNVLADCNSVRVP-----HCPASVINWNRRREILLREIFSVRADILCLQDADFFHQWWCPQLINAGYDSLF-----KQRTCASGVFREGVIIAWKRDMFDLFRSGEVELNRLGEDEENRPLATKAAMSDDVALMVLLRPWQDAEYPSGVCVVCTQLHDEQTPLGDQVRSLQARGLTRTVEVFNADFHLPIVMCGTMNCLPSSSTYEILCRGVEAQDPAKPLPAGKPLVTPLSTSSVRIRWSPPPDDSEALSPPIDKYWILWVPGGSRFLAGESISIFESECLVYDLVETETGNVRTVQNP---LRSFVVTGLSSGVAYEFRISAVNSLGRGPWGERSEPVRT 1170
++S++SYNVL+ + R+ + A+++N +RRE LLREI S ADI+CLQ+ D + WW +L AGYDS++ T + EG++ A+++ F LFRS EV LN L + + LA +A D +ALMV L+PW+ + PS +CVV TQL T ++VR LQ L R + VFNADF LP+++ GT N +PS+ Y + G P P G+P++ ++SS+RI W PP + +P S + E + V + +G + + P +SF VT LS+ + Y+FR+ A N+ G G W + S P T
Sbjct: 33 KVSVLSYNVLSQMGARRMQRRGKSYVSAAILNIRQRRERLLREILSYDADIMCLQEVDEYDDWWAAELAIAGYDSIYATSAASDSTTVTKDIDEGLVTAFRKSTFQLFRSAEVHLNDLCANINDANLAARAKQ-DKIALMVCLQPWETSTLPSALCVVNTQLASGATSELERVRVLQTEYLCRQIAVFNADFQLPVLLAGTFNAVPSNDVYHTILTGRRRPVPEAPAAPGRPVIDDPTSSSLRISWEPPQPSLTSTTP--------------------STPVLEYKIAVKNCTSKASGFLYELSVPDGAAKSFTVTSLSASMTYQFRVMARNAYGWGYWSQPSAPGST 359
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Match: A0A485KBP2_9STRA (Aste57867_2361 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBP2_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.620e-52 Identity = 134/373 (35.92%), Postives = 187/373 (50.13%), Query Frame = 1
Query: 58 WGARMLLPVKPRHPDVAGIATCRGTPLRSRRLRPPLRLSIVSYNVLADCNSVRV--PHCPASVINWNRRREILLREIFSVRADILCLQDADFFHQWWCPQLINAGYDSLFKQRTCASGVFREGVIIAWKRDMFDLFRSGEVELNRLGEDEENRPLATKAA--MSDDVALMVLLRPWQDAEYPSGVCVVCTQLHDEQTPLGDQVRSLQARGLTRTVEVFNADFHLPIVMCGTMNCLPSSSTYEILCRGVEAQDPAKPLPAGKPLVTPLSTSSVRIRWSPPPDDSEALSPPIDKYWILWVPGGSRFLAGESISIFESECLVYDLVETETGNVRTVQNPLRSFVVTGLSSGVAYEFRISAVNSLGRGPWGERSEPV 1164
+G R +P P GI T T +S+++YNV+ ++ P+C SV+ RR+E +L+E+ S ADILCLQ+ D FH WW P+L AGYDS++ QRT G + +G++IA++R +F +FR+ + LN + + P AT AA D+VAL+V L+PW+ +PS VCVV QL P +QVR Q L VEVFNADF +P+V+ G+ N P S Y IL G P P +P STS++ + W PP L+ +D R + G + F E +V D T SF T LS+G YEFR++ N G WGE S P
Sbjct: 8 YGGRAFVPTIHAEP---GIKTANET------------VSVLTYNVMRQMHATPAFKPYCDPSVLTATRRKEQILQELLSYNADILCLQEVDDFHLWWVPRLNAAGYDSVYHQRT---GDYDDGLVIAFRRILFQIFRTQRINLN-----DVHAPNATVAAHLQQDNVALLVALQPWETCHFPSAVCVVNVQLASH--PDREQVRRRQIEHLLPLVEVFNADFQMPLVLAGSFNVTPESHVYHILRTGRPRPGPEPPERMARPRADEPSTSTITVTWDPPLMHGPVLAYRVD-----------RRVNGSTTVGFAHEVVVEDPTAT-------------SFKATMLSAGTTYEFRVAVKNGAG---WGEYSAPT 328
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Match: A0A329SCY1_9STRA (Fibronectin type-III domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SCY1_9STRA) HSP 1 Score: 201 bits (512), Expect = 2.770e-52 Identity = 123/348 (35.34%), Postives = 185/348 (53.16%), Query Frame = 1
Query: 166 RLSIVSYNVLADCNSVRVP-----HCPASVINWNRRREILLREIFSVRADILCLQDADFFHQWWCPQLINAGYDSLFK-----QRTCASGVFREGVIIAWKRDMFDLFRSGEVELNRLGEDEENRPLATKAAMSDDVALMVLLRPWQDAEYPSGVCVVCTQLHDEQTPLGDQVRSLQARGLTRTVEVFNADFHLPIVMCGTMNCLPSSSTYEILCRGVEAQDPAKPLPAGKPLVTPLSTSSVRIRWSPPPDDSEALSPPIDKYWILWVPGGSRFLAGESISIFESECLVYDLVETETGNVRTVQNP---LRSFVVTGLSSGVAYEFRISAVNSLGRGPWGERSEPVRT 1170
++S+++YN+L+ + R+ + A+ +N +RRE LLREI S ADI+CLQ+ D + WW +L AGYDS++ T + +G++ A+++ F LFRS E+ LN L + + LA +A D +AL+V L+PW+ + PS +CVV TQL TP ++VR LQ L R + VFNADF LPIV+ GT N PSS Y + G P P G+P++ ++SS+R+ W PP +L+P S I E + V + V +G + + P +SF+VT LS+ + Y+FR+ A N G G W + S P T
Sbjct: 33 KVSVLTYNMLSQMGARRMQRRGKSYVGAATLNIRQRRERLLREILSYDADIMCLQEVDEYDDWWAAELAIAGYDSIYATSATPDSTTVAKDIDDGLVTAFRKSTFQLFRSTELHLNDLCANINDANLAARAKQ-DKLALLVCLQPWETSALPSALCVVNTQLAAGATPELERVRVLQTEYLCRQLTVFNADFQLPIVLAGTFNATPSSDVYHTILTGRRRPVPEAPAAPGRPVIDDPTSSSLRVSWEPPQRSLTSLTP--------------------STPILEYKIAVKNCVSQASGFLYELPVPDGAAQSFIVTSLSASMTYQFRVMAGNEYGWGDWSQPSAPGST 359
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Match: A0A421FB39_9STRA (Fibronectin type-III domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FB39_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.220e-51 Identity = 126/347 (36.31%), Postives = 181/347 (52.16%), Query Frame = 1
Query: 166 RLSIVSYNVLADCNSVRVP-----HCPASVINWNRRREILLREIFSVRADILCLQDADFFHQWWCPQLINAGYDSLFK-----QRTCASGVFREGVIIAWKRDMFDLFRSGEVELNRLGEDEENRPLATKAAMSDDVALMVLLRPWQDAEYPSGVCVVCTQLHDEQTPLGDQVRSLQARGLTRTVEVFNADFHLPIVMCGTMNCLPSSSTYEILCRGVEAQDPAKPLPAGKPLVTPLSTSSVRIRWSPPPDDSEALSP--PIDKYWILWVPGGSRFLAGESISIFESECLVYDLVETETGNVRTVQNPLRSFVVTGLSSGVAYEFRISAVNSLGRGPWGERSEPVRT 1170
++S+++YNVL+ + ++ + +++N +RRE LLREI S ADI+CLQ+ D + WW +L AGYDS++ Q EG++ A+++ F LFRS EV LN L + + LA +A D +ALMV ++PW+ + PS +CVV TQL TP + VR LQ L R + VFNADF LP+V+ GT N PSS Y + G P P +P + ++SS+R+ W PP + +L+P PI +Y + SR + F E V D T SFV T LS+ + Y+FRI A N G G W + S P T
Sbjct: 31 KVSVLTYNVLSQMGARKMQRGGKSYVSTAILNIRQRREKLLREILSYDADIMCLQEIDEYDDWWAAELATAGYDSIYATSAAPQSAVVVNAIDEGLVTAFRKSTFQLFRSEEVHLNDLCANINDPNLAARARQ-DRLALMVCVQPWETSALPSALCVVNTQLAAGPTPEMELVRVLQTEHLCRQLAVFNADFQLPVVLAGTFNATPSSDVYHTILTGRRRPVPEAPTAPSRPNIDEETSSSLRVSWQPPSPSATSLTPSVPILEYKVAVKNCASRSMG------FLYELSVPDGTAT-------------SFVTTSLSADMMYQFRIMARNEHGWGHWSQPSTPTST 357
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Match: G4ZS96_PHYSP (Fibronectin type-III domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZS96_PHYSP) HSP 1 Score: 197 bits (500), Expect = 1.490e-50 Identity = 121/348 (34.77%), Postives = 178/348 (51.15%), Query Frame = 1
Query: 166 RLSIVSYNVLADCNSVRVP-----HCPASVINWNRRREILLREIFSVRADILCLQDADFFHQWWCPQLINAGYDSLFKQRTCASGV-----FREGVIIAWKRDMFDLFRSGEVELNRLGEDEENRPLATKAAMSDDVALMVLLRPWQDAEYPSGVCVVCTQLHDEQTPLGDQVRSLQARGLTRTVEVFNADFHLPIVMCGTMNCLPSSSTYEILCRGVEAQDPAKPLPAGKPLVTPLSTSSVRIRWSPPPDDSEALSPPIDKYWILWVPGGSRFLAGESISIFESECLVYDLVETETGNVRTVQNP---LRSFVVTGLSSGVAYEFRISAVNSLGRGPWGERSEPVRT 1170
++S+++YNVL+ + R+ + A+++N +RR+ +LREI S ADI+CLQ+ D + WW +L AGYDS++ S EG++ A+++ F LFRS EV LN L + + LA +A D +AL+V L+PW+ + PS +CV TQL TP ++VR LQ L R V VFNADF LPIV+ GT N PSS Y + G P P +P V + SS+R+ W PP +L+ S + E + V + +G + + P +SFVV LS+ + Y+FR+ A N G G W + S P T
Sbjct: 33 KVSVLTYNVLSQMGARRMQRGGKSYVSAAILNIRQRRDRVLREILSYDADIMCLQEVDEYDDWWAVELATAGYDSIYATSAAPSSAAVAKEIDEGLVTAFRKSTFQLFRSSEVHLNDLCANINDPNLAARAKQ-DKLALLVSLQPWETSALPSALCVANTQLAAGATPEMERVRVLQTEYLCRQVAVFNADFQLPIVLAGTFNATPSSDVYHTILTGRRRPVPEAPAAPSRPEVDEPTASSLRVNWQPPQPSVTSLT--------------------SSAPVLEYKVAVKNCASKTSGFLYELSVPDGAAKSFVVASLSANMTYQFRVMARNEHGWGHWSQPSAPEST 359
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Match: A0A662Y7A2_9STRA (Fibronectin type-III domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y7A2_9STRA) HSP 1 Score: 195 bits (495), Expect = 7.290e-50 Identity = 125/351 (35.61%), Postives = 183/351 (52.14%), Query Frame = 1
Query: 166 RLSIVSYNVLADCNSVRVP-----HCPASVINWNRRREILLR----EIFSVRADILCLQDADFFHQWWCPQLINAGYDSLFKQR-----TCASGVFREGVIIAWKRDMFDLFRSGEVELNRLGEDEENRPLATKAAMSDDVALMVLLRPWQDAEYPSGVCVVCTQLHDEQTPLGDQVRSLQARGLTRTVEVFNADFHLPIVMCGTMNCLPSSSTYEILCRGVEAQDPAKPLPAGKPLVTPLSTSSVRIRWSPPPDDSEALSP--PIDKYWILWVPGGSRFLAGESISIFESECLVYDLVETETGNVRTVQNPLRSFVVTGLSSGVAYEFRISAVNSLGRGPWGERSEPVRT 1170
++S+++YNVL+ + R+ + +++N +RRE+LLR E+ S ADI+CLQ+ D + WW QL AGYDS++ A +G++ A++++ F LFRS EV LN + ++ + LA +A D+VAL++ L+PW+ + PS +CVV TQL TP + VR LQA L R +F+ADF LPIV+ GT N PSS Y + G P +P+V S SS+++ W PP S +L P PI +Y + SR + F E V D T SFVV LS+ + Y+ R+ A N G GPW + S P T
Sbjct: 34 KVSVLTYNVLSQMGARRLQRGGKSYVNPAILNIRQRRELLLRHSPSEMLSYDADIMCLQEMDEYDDWWAAQLALAGYDSVYASACPSTSAAALSEIDDGLVTAFRKETFQLFRSSEVHLNDVCDNITDLNLAARAKQ-DNVALLLCLQPWESSALPSALCVVNTQLAAGPTPQMELVRVLQAEYLCRQTAIFSADFQLPIVLAGTFNATPSSDVYHTIITGRRRPVAEAPAAPDRPVVDDPSPSSLKVTWKPPTPSSTSLVPSAPILEYKVAVKNCASRSMG------FMHELSVADSSAT-------------SFVVPSLSANMTYQLRVMARNEFGWGPWSDPSAPTTT 364
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Match: A0A2D4BK15_PYTIN (Fibronectin type-III domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK15_PYTIN) HSP 1 Score: 190 bits (482), Expect = 2.310e-48 Identity = 120/346 (34.68%), Postives = 183/346 (52.89%), Query Frame = 1
Query: 166 RLSIVSYNVLADCNSVRV-----PHCPASVINWNRRREILLREIFSVRADILCLQDADFFHQWWCPQLINAGYDSLFKQRTCASGVFREGVIIAWKRDMFDLFRSGEVELNRLGEDEENRPLATKAAMSDDVALMVLLRPWQDAEYPSGVCVVCTQLHDEQTPLGDQVRSLQARGLTRTVEVFNADFHLPIVMCGTMNCLPSSSTYEILCRGVEAQDPAKPLPAGKPLVTPLSTSSVRIRWSPPPDDSEALSPPIDKYWILWVPGGSRFLAGESISIFE--SECLVYDLVETETGNVRTVQNPLRSFVVTGLSSGVAYEFRISAVNSLGRGPWGERSEPVRTPFLA 1182
+LS++SYNVL+ + R+ + +S++ + RR++LLREI S AD+LCLQ+AD + +W QL + GYDS+F SG +G++IA++R+ F LFRS ++LN + + L K D + L++ L+PW+ + PS VCVV TQL + P + VR LQ L R + NADF LPIV+ G+ N LP S Y +L G P+ P +P + SSVR+ WS PP V G + G I++ S L +++ E + ++ VT LS+ Y+FR++A N++G GP+ + S P+ TP A
Sbjct: 25 KLSVLSYNVLSQMGARRLLRGDAAYVDSSLLTFMHRRDVLLREILSYDADVLCLQEADDYDDFWSVQLTDTGYDSVFASHP--SGTRDDGLLIAFRRERFQLFRSETIDLNAVATLATDANLVAKCRQ-DCIXLLLQLQPWERSRLPSAVCVVTTQLASD--PSHELVRVLQTELLCREIARVNADFQLPIVLTGSFNALPGSDVYHVLLTGRRRPRPSAPQQVERPEPRDATPSSVRLTWSAPP-----------------VSSGDGPILGYKIAVKNCTSATLGFNMHEIDVXGAXVCEH-----TVTMLSANTPYQFRVAARNAVGLGPFSQPSWPITTPATA 343 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6519.14367.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6519.14367.1 >prot_H-paniculata_contig6519.14367.1 ID=prot_H-paniculata_contig6519.14367.1|Name=mRNA_H-paniculata_contig6519.14367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=758bp MVARPTPTYETPFTCEKEPWGARMLLPVKPRHPDVAGIATCRGTPLRSRRback to top mRNA from alignment at H-paniculata_contig6519:2984..5907- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6519.14367.1 ID=mRNA_H-paniculata_contig6519.14367.1|Name=mRNA_H-paniculata_contig6519.14367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2924bp|location=Sequence derived from alignment at H-paniculata_contig6519:2984..5907- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6519:2984..5907- >mRNA_H-paniculata_contig6519.14367.1 ID=mRNA_H-paniculata_contig6519.14367.1|Name=mRNA_H-paniculata_contig6519.14367.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4548bp|location=Sequence derived from alignment at H-paniculata_contig6519:2984..5907- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |