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Homology
BLAST of mRNA_H-paniculata_contig6515.14362.1 vs. uniprot
Match: D7G585_ECTSI (MCU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G585_ECTSI) HSP 1 Score: 221 bits (564), Expect = 6.870e-65 Identity = 109/160 (68.12%), Postives = 134/160 (83.75%), Query Frame = 1
Query: 40 LLLSFKQGRYKLNLPLSKLMTSTPTTTTDRETAFSFHPDHSLDAVKASIREEGVGSVEFVGPGGETLPDESTISGVAWHGGFDIKLDGKQFPVLATRAGGYGDEDESAGGRTELASLLERGKVMRLRAALQDETRRSMTYTEFQDLCEDCGMDEADAQQV 519
LLLSFK+G+YKL LPL ++ +R+TAFSFHP+HSL+ VKA+I+EEGV SVEF+GP GE LPD+S++ AWHGGFD+ LDGKQFPVLATR+GGY +++E GGRTEL SLLERG+V+RLRAAL DETRRSMTY EF+ LCEDCGMD+ADA++V
Sbjct: 428 LLLSFKRGKYKLKLPLQD---GRVVSSAERDTAFSFHPNHSLETVKANIQEEGVSSVEFMGPNGEPLPDDSSVGDAAWHGGFDMTLDGKQFPVLATRSGGYVEDEEEGGGRTELPSLLERGRVLRLRAALDDETRRSMTYAEFERLCEDCGMDKADARKV 584
BLAST of mRNA_H-paniculata_contig6515.14362.1 vs. uniprot
Match: A0A6H5KP00_9PHAE (MCU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP00_9PHAE) HSP 1 Score: 218 bits (555), Expect = 2.800e-63 Identity = 108/160 (67.50%), Postives = 131/160 (81.88%), Query Frame = 1
Query: 40 LLLSFKQGRYKLNLPLSKLMTSTPTTTTDRETAFSFHPDHSLDAVKASIREEGVGSVEFVGPGGETLPDESTISGVAWHGGFDIKLDGKQFPVLATRAGGYGDEDESAGGRTELASLLERGKVMRLRAALQDETRRSMTYTEFQDLCEDCGMDEADAQQV 519
LLLSFK+G+YKL LPL + +R+TAFSFHP+HSL+ VKA+I+EEGV SVEF GP G+ LPD+S++ AWHGGFD+ LDGKQFPVLATR+GGY +++E GGRTEL SLLERGKV+RLRAAL DETRRSM Y EF+ LCEDCGMD+ADA++V
Sbjct: 496 LLLSFKRGKYKLKLPLQD---GRVVFSAERDTAFSFHPNHSLETVKANIQEEGVSSVEFTGPNGKPLPDDSSVGDAAWHGGFDMTLDGKQFPVLATRSGGYVEDEEEGGGRTELPSLLERGKVLRLRAALNDETRRSMAYAEFEGLCEDCGMDKADARKV 652
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 223.4 |
| Seed ortholog evalue | 8.2e-56 |
| Seed eggNOG ortholog | 2880.D7G585 |
| Preferred name | CCDC109B |
| KEGG rclass | RC00209,RC02895 |
| KEGG ko | ko:K06125,ko:K14831,ko:K20858 |
| KEGG TC | 1.A.77.1 |
| KEGG Reaction | R05000,R05616,R07273 |
| KEGG Pathway | ko00130,ko01100,ko01110,ko04020,ko04218,ko04621,map00130,map01100,map01110,map04020,map04218,map04621 |
| KEGG Module | M00128 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0002009,GO:0002791,GO:0002793,GO:0003008,GO:0003674,GO:0005215,GO:0005216,GO:0005246,GO:0005261,GO:0005262,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006839,GO:0006851,GO:0006873,GO:0006874,GO:0006875,GO:0006996,GO:0007010,GO:0007015,GO:0007154,GO:0007165,GO:0007275,GO:0007369,GO:0007610,GO:0007611,GO:0007613,GO:0007615,GO:0008016,GO:0008150,GO:0008200,GO:0008324,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009987,GO:0010646,GO:0010647,GO:0010817,GO:0015075,GO:0015085,GO:0015267,GO:0015291,GO:0015292,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0016247,GO:0016248,GO:0019222,GO:0019722,GO:0019725,GO:0019855,GO:0019866,GO:0019932,GO:0022607,GO:0022803,GO:0022804,GO:0022838,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0023056,GO:0030001,GO:0030003,GO:0030029,GO:0030036,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031323,GO:0031966,GO:0031967,GO:0031975,GO:0032024,GO:0032501,GO:0032502,GO:0032592,GO:0032879,GO:0032880,GO:0032991,GO:0033500,GO:0034220,GO:0034702,GO:0034703,GO:0034704,GO:0035556,GO:0036444,GO:0042592,GO:0042593,GO:0042802,GO:0043009,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044057,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0046873,GO:0046883,GO:0046887,GO:0048518,GO:0048522,GO:0048583,GO:0048598,GO:0048729,GO:0048856,GO:0048878,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0050796,GO:0050801,GO:0050877,GO:0050890,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051239,GO:0051259,GO:0051260,GO:0051560,GO:0051561,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060026,GO:0060027,GO:0060401,GO:0060429,GO:0061041,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070509,GO:0070588,GO:0070838,GO:0071840,GO:0072375,GO:0072503,GO:0072507,GO:0072511,GO:0080134,GO:0090087,GO:0090276,GO:0090277,GO:0097435,GO:0098573,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098772,GO:0098796,GO:0098798,GO:0098800,GO:0099106,GO:1902495,GO:1903034,GO:1903426,GO:1903522,GO:1903530,GO:1903532,GO:1904951,GO:1990246,GO:1990351,GO:1990542,GO:2000377 |
| EggNOG free text desc. | uniporter activity |
| EggNOG OGs | KOG2966@1,KOG2966@2759 |
| Ec32 ortholog description | Coiled-coil domain containing protein 109, C-terminal |
| Ec32 ortholog | Ec-14_006600.1 |
| EC | 2.5.1.39 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01006,ko02000,ko03009 |
| Exons | 3 |
| Model size | 519 |
| Cds size | 519 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6515.14362.1 >prot_H-paniculata_contig6515.14362.1 ID=prot_H-paniculata_contig6515.14362.1|Name=mRNA_H-paniculata_contig6515.14362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=173bp
SSSSAKSKSTSSPLLLSFKQGRYKLNLPLSKLMTSTPTTTTDRETAFSFH PDHSLDAVKASIREEGVGSVEFVGPGGETLPDESTISGVAWHGGFDIKLD GKQFPVLATRAGGYGDEDESAGGRTELASLLERGKVMRLRAALQDETRRS MTYTEFQDLCEDCGMDEADAQQV back to topmRNA from alignment at H-paniculata_contig6515:7436..12203+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6515.14362.1 ID=mRNA_H-paniculata_contig6515.14362.1|Name=mRNA_H-paniculata_contig6515.14362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4768bp|location=Sequence derived from alignment at H-paniculata_contig6515:7436..12203+ (Halopteris paniculata Hal_grac_a_UBK monoicous) TCGAGCAGCTCTGCAAAATCCAAGAGCACAAGCTCGCCCTTGCTTTTGAG
CTTCAAGCAGGGGAGGTATAAGCTCAACCTTCCACTTAGCAAGCTTATGA
CCTCCACGCCCACAACGACGACGGATCGGGAAACGGCGTTTTCGTTCCAC
CCAGATCACAGTCTGGACGCGGTCAAGGCCAGCATACGGGTATGCATAGT
AAAAATACAGTCTGCTGTACGGCGAGTGCCCTATAAAGCGCCGACCCACT
GTAGAACACGCTCAAACTCCTGCAACCGATAATTGCGTCGTATATCTATT
GACATACATGATAATATAATGGGCAAACGTTCAGTACACCGCCCGTATAC
GGTATATCAGGCACATTGATTCGGTGCGTGCTTTTCTGCAATGCCGTAAA
GTAGGTCCCCATCGACTTTGCCGGCATGTTTTATTGCAAGTATGGTCGGC
TGATTGTATATACTCCGGCGCCATAGCCGAGGTTGGCACGACCGTGTTGG
CATATGCTATGTATCAATGTAAACGCAACATTTACCTCTCCAAGGCAAAT
GAATCTCAACATGGAGACACACTATCTGCACTCTTGTCAGCGTAACTTTG
TGTTGTCTTGAAGATCCTCTCACGATAGACTAGCCAAAAAGACTGTGCTG
GTTGCCGGCGCTGGGCTGCTGAAAGTTTCAAGGGTGTGATGTACCTAGAC
ATGGGTTGAGCGCCGTTGTGGGTTAACCGTGTAAGGAAGTTACAGCGCGA
AATACAGCTTTGCTTTTTTCGCACTGTGACGGGTCCCGAGGTCTGTCTGT
GTCATTTGCTCTTCCAATGGGATCACCCACCGCTTGTTGAAACGATGTCG
TAGTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
TGCTAGTTATTATGCTTTGGAGAATGACCAGTGAACGAAAGTAACACCTT
GGTGATTTCTGTTCGTGCCCCTTCGTCGATCGCCGTGACTGGACTTGCAG
AGAATGGCACATATATCGCACACTATTGACGCATCTCTCAACCTGATAGT
TTACATATGTGCCGGCTACCATCTCAACTTCTCCCTGTGGTACGAAAAAT
TTTAAGCGAACTGTACGAGGAATTGTTCATACCGGAATTGAAGAAAGAAA
CAGCGGGAAAACGGAAATAATGAATATAAACGATTTGAAGTTGTCCCTTT
TATAGGTTATCCTCCACATCACACCCCCCCCTTCGTGACACAGGCACTGC
AGGTAAGGTATGGCATCCGGTATACCCCGGGTATTTACGCCGGTATTTTA
TACCGTCGTACACGTGGGTACCGTAGGTATGACATTCGAAAATACCAGAA
TGTGCAGGTAAGGTAGGTATCGAAATCTCTATATACCGTGGTATACGTGG
GAACCATAGGCGAAAATACCGGGATGGACTGGTACCGGTAAGGTATCAAA
TATCCAAAATACCAGTACCGGGTACCAACCTTACCGACGGTGTCCGTGCT
TGGTGAGTATCTTGACTTTTTCCAGGCACTTGTAAGGGTAAGATTGTCTT
CGGCCGACTGGTGACGGTGAAGGTTTATCTGTTTTGTTCACAATATTGAA
TCTTGATCTCTCATCTTCTCACGTGCAGGTCAGCCACCTCTTGATGATAT
TTTTAGAATATTTGAATGGAAGTTGTCGCCCCCTTGACAAATACGAATGG
AATATGCACAACTACATTTGGGTAAACACGTATTTATTCGTATACAAGTC
TATGAAATGTCACTCTACAGATGGTCACGAGGTGGTAGTATACCCGGCGA
ACAGTCACACATATGCAGGTCCTGTTTAGTTTTCGGGTGGTACTGTACAG
ATTGAATACTACCTCTGCTCGAGGCTTTCGATGCTCCATGATATCCATGG
TATATCGAGTACACTGCATATTATTCTCGTTACACGGATATCTTCCCCAA
CTCGAACAGATACAGTATTCATTCCAGATTTGTCGTATTTAGTCGTGTCT
TGTATTCGTATTTGTCTGGGGGTGGAATTTTTTTTGCTTGGTGTCGCAGA
CCCTTCTGAGGCCTTGCTTAGGCTGTTGGTTGTTGAGGTCGGAACCTTGA
CTTTGTACATATTTTTGAGGCCGTCTAATTATTCTTTTCGTCTGTCTAAT
TTCAAGATAAATAACATGAACTAACTGTATTGACGCCGGTAAAATTAAAA
TTTTTCCACAGCCAAGAAATATTCACACACAAATGAGAAGAAACGAAACA
AGCCTTAATTTTTTTATATTTTTGGTGGTGATCGAGGTCGGATTTGAGGT
CACGACGTTTTTACCTCGCGGTCAGGGGTCCTACCGGCGACGCCACCATG
AAAAGAGAGTTTGTCCCCTTAGGCCATCTCTTATGGGGCCAAAAAAAATC
AAGTCAAAATCACAAAATCCAATTTTTTTAATGAGAAAAGAAATGACCGG
GAAAAATTGATAGCTCATTTTGTGCGCTCGGACTTGAGTCAAAAACATAA
AATGTCGTTAGTTCAATGTTTGATGGCGTTTTGCTAGCGGCGCAATGAAG
TCGAGAAGATTTCGAACACACGAGTTCTCGTCCAGCATATACTCTCATCC
TGTGAAAGCGAGCCACCATGAATGTACATCTATCGCGCAATGTTTATCGA
GACAAACCCTTGCGTGGAATGGGTGTGGAAGGAAATGAAGCTCAGGGGTT
CAGTGCGGGTGTGTGCAAGACATAGTGGATGATTCTACAGAATGTACCAC
GGTGGTACCCTTGTACGTCTATTAAGAAGAACGGTGGGGCCCTGCCCCTG
AGCAAGAGGTACAAGAAGGCGGTGCAGCTATACAAGGATTCCGCCGTTGA
CAGCTTCTTCCGCAGGGTGTAGGAAACCCCCAAGCTGGATCTCCATGTGT
GGGCGACTCACAGTCTGTTCGGAAAGATAGCGAGCGCCGCTGCACCCATG
CGTCGACTGCGTCTGTCATGTTAGTCTAGATTATCGACGGCCGCCACTAC
AGCAGCGAGCGCCGCCGATATGAACGATTGCCATTCCTGCAGATCTTCCA
TAGGGCGGCTGGGCTCACACCTTAGATTGTGTATGTGCTTCGTACTGGCA
TTTGTGACCAGCGTGGGTATTTTAGTGCAAGCTATGAAATCCCTGCAAAA
CCATAAAATTACAAAACAAAATTACTCGGCAAGCTGTCAATCCTTCGCCA
TAAAAAAATATCGTTTTAAAAAAACTGTTTTTTTACCCCATAAGATGATA
GATAAAAAAAACTCTAGTAAAAAAAATCGATTTTATGTATGATTTTGACT
AGAGTTTTCTTTACCCCCAAAGAAACATCGACTTTTTTTCCCGTCTCTTG
TAGTATAAGATGTTCTCCACGGGTGAATATATATATATATATATATGTTG
GTGCGGGATGGGGGGAAAGCGTGTTGAACCTTCTTTTGCCCCGGGTTGCA
ATTGTTTCCGTGATGAGTTGCTGTTTCAATTCAATCACCAGAGTATCGTT
TTCTTCTGCTTGTACTGGCTTTCCTGGTCGCACCTGCACTATCCAGGAGG
AAGGGGTCGGAAGTGTGGAGTTCGTGGGGCCTGGCGGCGAGACTCTGCCC
GACGAGAGTACCATCAGCGGCGTCGCTTGGCACGGAGGCTTTGACATAAA
ACTGGACGGAAAACAAGTGAGCCGTGATGGCTTGGACTGAGATGCAACAA
GTTATCACATGAACGTCTAGTTTGATCAACACCCCACTCAGTTCAATTAT
TACCAATCGACCAGCTTAGTCACTCAGTTAGTTTTGTCTCGTTTTTTTCG
TCTCGTGACTCAAGAGGTGTTCATTGCTGTAGATGACCAGCAGTTTGTTG
TATATTGATGACATGAAGAAGGGACAAAAAAATGATGATGGGAAGTGTTG
AAGTGGTGGTTGATGAGGGGGTTGTGACGTTGTGAAAAATGTCTCGGTAC
AGTTTCTAATCTCGTTCATGGCGAATCATGTCCATGCGCCACGAATTTGA
CATATGTGTACTGGTAGTTATGTTCCAATATGCACGGCGTTGAGAGGCCG
TCATCATCCCGAGGGCGGAGCATTTGTTTTCCTTGTTGACGATAACTGCT
CAAGTATGACCAAATTCCTTGTTATGTTGATGGTGGACACTGAATGCTAG
TAATTTCGTTTCCATTGAAATATCACATCTCACGTCCTTCATTTAACGAG
TATGATAGAGCGCTACTCCGCTTGAGGTATTTACTGCGGAAGTAACCCTA
TACTGTAATTCAAGTAAACAATATGTTCGGCCATGGATGAGGACAGCAGG
ATTCCAAAGTAGCGTACCAGAGGACTAAATAAATTCGAAAGTCGCTTTTC
TCTGTCTCGGAATTTTCTCGGAAAATTTGTGCATTTTTTGCATTCTCTTT
ATTTCTTCTGTTGTAATGGCGACTTCATTCGGCAGCACTAAACGTATATT
TTCTGTGTATTTATGTTTTTCTCGTCACATGGTTGTTATAATGTTACTTG
GACTTTTCTCGAGTTGACTTTTGTTGGATTTTTTGTTTGCTTTGAACTTT
TTTCGCAGTTTCCGGTGCTGGCTACACGAGCCGGAGGCTATGGCGACGAA
GATGAGAGTGCGGGAGGAAGGACGGAGCTCGCGTCTTTGCTAGAGCGAGG
GAAAGTGATGCGCTTGCGCGCGGCCCTGCAGGACGAGACTCGACGTAGTA
TGACGTATACAGAGTTCCAGGACCTATGCGAGGACTGTGGGATGGATGAG
GCAGACGCTCAACAGGTT back to topCoding sequence (CDS) from alignment at H-paniculata_contig6515:7436..12203+ >mRNA_H-paniculata_contig6515.14362.1 ID=mRNA_H-paniculata_contig6515.14362.1|Name=mRNA_H-paniculata_contig6515.14362.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at H-paniculata_contig6515:7436..12203+ (Halopteris paniculata Hal_grac_a_UBK monoicous) TCGAGCAGCTCTGCAAAATCCAAGAGCACAAGCTCGCCCTTGCTTTTGAG CTTCAAGCAGGGGAGGTATAAGCTCAACCTTCCACTTAGCAAGCTTATGA CCTCCACGCCCACAACGACGACGGATCGGGAAACGGCGTTTTCGTTCCAC CCAGATCACAGTCTGGACGCGGTCAAGGCCAGCATACGGTCGAGCAGCTC TGCAAAATCCAAGAGCACAAGCTCGCCCTTGCTTTTGAGCTTCAAGCAGG GGAGGTATAAGCTCAACCTTCCACTTAGCAAGCTTATGACCTCCACGCCC ACAACGACGACGGATCGGGAAACGGCGTTTTCGTTCCACCCAGATCACAG TCTGGACGCGGTCAAGGCCAGCATACGGGAGGAAGGGGTCGGAAGTGTGG AGTTCGTGGGGCCTGGCGGCGAGACTCTGCCCGACGAGAGTACCATCAGC GGCGTCGCTTGGCACGGAGGCTTTGACATAAAACTGGACGGAAAACAAGA GGAAGGGGTCGGAAGTGTGGAGTTCGTGGGGCCTGGCGGCGAGACTCTGC CCGACGAGAGTACCATCAGCGGCGTCGCTTGGCACGGAGGCTTTGACATA AAACTGGACGGAAAACAATTTCCGGTGCTGGCTACACGAGCCGGAGGCTA TGGCGACGAAGATGAGAGTGCGGGAGGAAGGACGGAGCTCGCGTCTTTGC TAGAGCGAGGGAAAGTGATGCGCTTGCGCGCGGCCCTGCAGGACGAGACT CGACGTAGTATGACGTATACAGAGTTCCAGGACCTATGCGAGGACTGTGG GATGGATGAGGCAGACGCTCAACAGGTTTTTCCGGTGCTGGCTACACGAG CCGGAGGCTATGGCGACGAAGATGAGAGTGCGGGAGGAAGGACGGAGCTC GCGTCTTTGCTAGAGCGAGGGAAAGTGATGCGCTTGCGCGCGGCCCTGCA GGACGAGACTCGACGTAGTATGACGTATACAGAGTTCCAGGACCTATGCG AGGACTGTGGGATGGATGAGGCAGACGCTCAACAGGTT back to top
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