prot_H-paniculata_contig65.14339.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig65.14339.1
Unique Nameprot_H-paniculata_contig65.14339.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length133
Homology
[Close]
BLAST of mRNA_H-paniculata_contig65.14339.1 vs. uniprot
Match: A0A6H5KX66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX66_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 4.560e-32
Identity = 58/77 (75.32%), Postives = 67/77 (87.01%), Query Frame = 0 
Query:   56 DAEADELRREGAMNFWTLEFYDPILEKAFRRHYRSWVIPRIRVGVQIQIALNLLFGALELIYGYSAGTVIAVLCLRL 132
            DAEAD    E AM+ WTLEF+DPILEK+FR+HYRSWVIPRIRVGVQIQ+AL+LLFG+LEL  GY+AG V+ VLCLRL
Sbjct:    5 DAEADAQAIERAMSIWTLEFHDPILEKSFRKHYRSWVIPRIRVGVQIQMALHLLFGSLELTCGYTAGAVMGVLCLRL 81
[Close]
BLAST of mRNA_H-paniculata_contig65.14339.1 vs. uniprot
Match: D8LDZ6_ECTSI (Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ6_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.890e-31
Identity = 64/94 (68.09%), Postives = 79/94 (84.04%), Query Frame = 0 
Query:   39 TRSKAAAVVVSNYEEDPDAEADELRREGAMNFWTLEFYDPILEKAFRRHYRSWVIPRIRVGVQIQIALNLLFGALELIYGYSAGTVIAVLCLRL 132
            +++ AAAV  ++ EE+ DAEAD    E AM+ WTLEF+DPILEK+FR+HYRSWVIPRIRVGVQIQ+AL+LLFG+LEL  GY+AG V+ VLCLRL
Sbjct:    3 SKTAAAAVEGNSSEEEADAEADAQAVERAMSIWTLEFHDPILEKSFRKHYRSWVIPRIRVGVQIQMALHLLFGSLELTCGYTAGAVMGVLCLRL 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65.14339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KX66_9PHAE4.560e-3275.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDZ6_ECTSI1.890e-3168.09Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..115
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig65contigH-paniculata_contig65:45280..46150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig65.14339.1mRNA_H-paniculata_contig65.14339.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig65 45280..46150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig65.14339.1 ID=prot_H-paniculata_contig65.14339.1|Name=mRNA_H-paniculata_contig65.14339.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp
MAKGGSIESAAEAGGGNWNPHTNSNANVGRRGSLLKFSTRSKAAAVVVSN
YEEDPDAEADELRREGAMNFWTLEFYDPILEKAFRRHYRSWVIPRIRVGV
QIQIALNLLFGALELIYGYSAGTVIAVLCLRLT
back to top