mRNA_H-paniculata_contig65.14335.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig65.14335.1
Unique NamemRNA_H-paniculata_contig65.14335.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Match: D8LDZ6_ECTSI (Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ6_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 3.260e-45
Identity = 78/85 (91.76%), Postives = 82/85 (96.47%), Query Frame = 1 
Query:   49 QVYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSKEDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTGPCIGGVIGRL 303
            +VYTAFDTHLD LGVYKLDT+GDAFVVVAGLDGFKS+EDHAMAMVKYAFR LFELERIK EEDLNFEMR+GLHTGPCIGGVIGRL
Sbjct:  802 KVYTAFDTHLDALGVYKLDTVGDAFVVVAGLDGFKSQEDHAMAMVKYAFRTLFELERIKTEEDLNFEMRVGLHTGPCIGGVIGRL 886
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BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Match: A0A835Z2D8_9STRA (Adenylate and guanylate cyclase catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D8_9STRA)

HSP 1 Score: 124 bits (311), Expect = 6.520e-31
Identity = 59/75 (78.67%), Postives = 67/75 (89.33%), Query Frame = 1 
Query:   49 QVYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSKEDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTG 273
            +VYTAFD H++  GVYKLDTIGDAFVVVAGLDG+KS+EDHAMAMV +AFRMLFELERIK  + L FEMRIG+HTG
Sbjct:  924 KVYTAFDKHIEPSGVYKLDTIGDAFVVVAGLDGYKSQEDHAMAMVMFAFRMLFELERIKASDGLQFEMRIGIHTG 998
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BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Match: A0A7S3XMT0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMT0_HETAK)

HSP 1 Score: 119 bits (298), Expect = 3.550e-29
Identity = 54/82 (65.85%), Postives = 68/82 (82.93%), Query Frame = 1 
Query:   52 VYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSKEDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTGPCIGGVIG 297
            +Y AFD HLD  GVYKL+TIGDAFVVV GL GF+S+E+HA+A++K+AF ML ELE I +   L+FEMRIG+HTGP +GGV+G
Sbjct:   52 IYNAFDKHLDEQGVYKLETIGDAFVVVGGLPGFRSRENHALAVIKFAFCMLHELELITSRNGLDFEMRIGIHTGPVVGGVVG 133
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BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Match: A0A024UGZ6_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGZ6_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.430e-24
Identity = 43/83 (51.81%), Postives = 65/83 (78.31%), Query Frame = 1 
Query:   49 QVYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSKEDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTGPCIGGVIG 297
            +VY+AFD HLD  GVYK+DT+GDAF+V+ GL  +KS+++HA+A+  +A  ML E++  +  E++N +MRIG+HTG  +GGV+G
Sbjct:  868 KVYSAFDRHLDAFGVYKMDTVGDAFIVIGGLPNYKSEKNHAVAITAFAVEMLREMDEFRRSENVNLQMRIGIHTGKVVGGVVG 950
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BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Match: A0A485L1I4_9STRA (Aste57867_14452 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1I4_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.950e-24
Identity = 43/83 (51.81%), Postives = 64/83 (77.11%), Query Frame = 1 
Query:   49 QVYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSKEDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTGPCIGGVIG 297
            +VY+AFD HLD  GVYK+DT+GDAF+V+ GL  +KS++ HA+A+  +A  ML E++  +  E++N +MRIG+HTG  +GGV+G
Sbjct:  907 KVYSAFDRHLDAFGVYKMDTVGDAFIVIGGLPNYKSEKHHAVAITAFAIEMLREMDEFRRSENVNLQMRIGIHTGKVVGGVVG 989
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BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Match: A0A6A3N5M0_9STRA (Guanylate cyclase domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3N5M0_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.360e-24
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:   49 QVYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSKEDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTGPCIGGVIG 297
            ++Y+ FD HLD LGVYK+DT+GDAF+VV GL   KS + HA A+  +A  ML E+ER   EE++  +MRIG+HTG  +GGV+G
Sbjct:   52 KIYSGFDRHLDDLGVYKMDTVGDAFIVVGGLPSHKSSKHHAAAIAAFAVEMLREIERFCKEENVALQMRIGIHTGSVVGGVVG 134
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BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Match: G4ZQS0_PHYSP (Guanylate cyclase domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZQS0_PHYSP)

HSP 1 Score: 100 bits (248), Expect = 2.520e-24
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:   49 QVYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSKEDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTGPCIGGVIG 297
            ++Y+AFD HLD LGVYK+DT+GDAF+VV GL   KS + HA A+  +A  M  E++R   EE++  +MRIG+HTG  +GGV+G
Sbjct:   64 KIYSAFDRHLDDLGVYKMDTVGDAFIVVGGLPSHKSSKHHAAAIAAFAVEMQREIQRFCKEENVALQMRIGIHTGNVVGGVVG 146
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BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Match: T0R275_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R275_SAPDV)

HSP 1 Score: 105 bits (262), Expect = 2.660e-24
Identity = 43/83 (51.81%), Postives = 64/83 (77.11%), Query Frame = 1 
Query:   49 QVYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSKEDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTGPCIGGVIG 297
            +VY+AFD HLD  GVYK+DT+GDAF+V+ GL  +KS++ HA+A+  +A  ML E+E  +  E++N +MRIG+H+G  +GGV+G
Sbjct:  864 KVYSAFDKHLDAFGVYKMDTVGDAFIVIGGLPNYKSEKSHAIAITAFAIEMLREMEAFRKSENVNLQMRIGIHSGKVVGGVVG 946
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BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Match: A0A1V9YZJ3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZJ3_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.680e-24
Identity = 43/83 (51.81%), Postives = 65/83 (78.31%), Query Frame = 1 
Query:   49 QVYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSKEDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTGPCIGGVIG 297
            +VY+AFD HLD  GVYK+DT+GDAF+V+ GL  +KS+++HA+A+  +A  ML E+E  +  E++N +MRIG+H+G  +GGV+G
Sbjct: 1524 KVYSAFDKHLDSFGVYKMDTVGDAFIVIGGLPDYKSQKNHAIAITAFAVEMLREMETFRQAENVNLQMRIGIHSGKAVGGVVG 1606
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BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Match: A0A067CHZ5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CHZ5_SAPPC)

HSP 1 Score: 102 bits (255), Expect = 2.360e-23
Identity = 41/83 (49.40%), Postives = 64/83 (77.11%), Query Frame = 1 
Query:   49 QVYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSKEDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTGPCIGGVIG 297
            +VY+AFD HLD  GVYK+DT+GDAF+V+ GL  +KS++ HA+A+  +A  ML E++  +  +++N +MRIG+H+G  +GGV+G
Sbjct:  841 KVYSAFDKHLDAFGVYKMDTVGDAFIVIGGLPNYKSEKSHAIAITAFAIEMLREMDDFRKSQNVNLQMRIGIHSGKVVGGVVG 923
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig65.14335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDZ6_ECTSI3.260e-4591.76Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A835Z2D8_9STRA6.520e-3178.67Adenylate and guanylate cyclase catalytic domain-c... [more]
A0A7S3XMT0_HETAK3.550e-2965.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A024UGZ6_9STRA1.430e-2451.81Uncharacterized protein n=4 Tax=Aphanomyces invada... [more]
A0A485L1I4_9STRA1.950e-2451.81Aste57867_14452 protein n=1 Tax=Aphanomyces stella... [more]
A0A6A3N5M0_9STRA2.360e-2454.22Guanylate cyclase domain-containing protein n=1 Ta... [more]
G4ZQS0_PHYSP2.520e-2453.01Guanylate cyclase domain-containing protein (Fragm... [more]
T0R275_SAPDV2.660e-2451.81Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A1V9YZJ3_9STRA3.680e-2451.81Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067CHZ5_SAPPC2.360e-2349.40Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig65contigH-paniculata_contig65:33790..34502 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score166.0
Seed ortholog evalue8.8e-39
Seed eggNOG ortholog2880.D8LDZ6
KEGG rclassRC00295
KEGG koko:K01530,ko:K01769,ko:K11858
KEGG ReactionR00434
KEGG Pathwayko00230,map00230
Hectar predicted targeting categoryother localisation
GOsGO:0000287,GO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0004016,GO:0004383,GO:0004888,GO:0005034,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006171,GO:0006182,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007154,GO:0007165,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0008074,GO:0008150,GO:0008152,GO:0008179,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009187,GO:0009190,GO:0009259,GO:0009260,GO:0009268,GO:0009410,GO:0009628,GO:0009653,GO:0009847,GO:0009893,GO:0009975,GO:0009987,GO:0010033,GO:0010243,GO:0010447,GO:0010562,GO:0010604,GO:0014070,GO:0014074,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0018130,GO:0019220,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019899,GO:0019932,GO:0019933,GO:0019935,GO:0023052,GO:0030104,GO:0030145,GO:0030154,GO:0030425,GO:0030435,GO:0031000,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031683,GO:0032268,GO:0032270,GO:0032502,GO:0032991,GO:0033554,GO:0033674,GO:0033993,GO:0034641,GO:0034654,GO:0035556,GO:0035690,GO:0036270,GO:0036477,GO:0038023,GO:0042221,GO:0042325,GO:0042327,GO:0042493,GO:0042592,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043085,GO:0043167,GO:0043169,GO:0043279,GO:0043549,GO:0043934,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044445,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045121,GO:0045859,GO:0045860,GO:0045937,GO:0046058,GO:0046068,GO:0046390,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051716,GO:0052652,GO:0055086,GO:0060089,GO:0060255,GO:0061478,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0071214,GO:0071236,GO:0071310,GO:0071396,GO:0071407,GO:0071470,GO:0071704,GO:0071900,GO:0071902,GO:0071944,GO:0072521,GO:0072522,GO:0080090,GO:0090407,GO:0097305,GO:0097306,GO:0097447,GO:0097458,GO:0098589,GO:0098805,GO:0098857,GO:0104004,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901654,GO:1901655,GO:1901698,GO:1901700,GO:1901701,GO:1904321,GO:1904322,GO:1904359,GO:1904360,GO:2000479,GO:2000481
EggNOG free text desc.guanylate cyclase activity
EggNOG OGsCOG2114@1,KOG1023@2759,KOG4171@2759
EC3.4.19.12,3.6.3.1,4.6.1.2
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04121
Exons2
Model size305
Cds size294
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig65.14335.1prot_H-paniculata_contig65.14335.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig65 33790..34493 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930759.621-CDS-H-paniculata_contig65:33789..339301622930759.621-CDS-H-paniculata_contig65:33789..33930Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig65 33790..33930 -
1691481439.6450746-CDS-H-paniculata_contig65:33789..339301691481439.6450746-CDS-H-paniculata_contig65:33789..33930Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig65 33790..33930 -
1622930759.6450164-CDS-H-paniculata_contig65:34340..344931622930759.6450164-CDS-H-paniculata_contig65:34340..34493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig65 34341..34493 -
1691481439.661033-CDS-H-paniculata_contig65:34340..344931691481439.661033-CDS-H-paniculata_contig65:34340..34493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig65 34341..34493 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930759.6682754-UTR-H-paniculata_contig65:34493..345021622930759.6682754-UTR-H-paniculata_contig65:34493..34502Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig65 34494..34502 -
1691481439.6704235-UTR-H-paniculata_contig65:34493..345021691481439.6704235-UTR-H-paniculata_contig65:34493..34502Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig65 34494..34502 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig65.14335.1

>prot_H-paniculata_contig65.14335.1 ID=prot_H-paniculata_contig65.14335.1|Name=mRNA_H-paniculata_contig65.14335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
MNCEVGPAGKRPKQVYTAFDTHLDGLGVYKLDTIGDAFVVVAGLDGFKSK
EDHAMAMVKYAFRMLFELERIKNEEDLNFEMRIGLHTGPCIGGVIGRL
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mRNA from alignment at H-paniculata_contig65:33790..34502-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig65.14335.1 ID=mRNA_H-paniculata_contig65.14335.1|Name=mRNA_H-paniculata_contig65.14335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=713bp|location=Sequence derived from alignment at H-paniculata_contig65:33790..34502- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGCAAGCAATGAACTGTGAGGTTGGACCTGCGGGAAAACGTCCCAAGCA
GGTGTACACGGCATTCGACACACATCTTGACGGGCTTGGGGTATACAAGC
TGGACACTATCGGCGACGCTTTCGTCGTTGTCGCCGGTCTTGACGGTTTC
AAATCGAAAGAGGTGAGAAACCTGGCGTCTCTGCTAAGCTTATTGCTGAA
AATGAGTGAGGTCCACAACGCCCGAAACTCGCGTATAAATAAATTAATCC
TTCGAGTTCGACAGCACTGATTTTCAGTGTCTGTGAGCATGTGTAGCGGC
CCTCGTAGACACAAGAGGACAGTCGGTCGCAAACGGGGAACACCAACAAA
TATCGTGAATTATCAAAATACAGATGGAAGAGGCTAGATTGCTTCTAACC
AAATGTGCCTTCACATACTTGACAGTGTCCGACAAAATCCAACAAAGACT
TCGAGCCAAATACCGAACGTATGATCCCACACAGCACATCTACTTCGCTG
CTGGGCATCATGCATCGCAAAAACCGAATGCGCCGAGAAACCGATCTTGT
GATTTATCTTGTTTTGCCGCAGGATCACGCGATGGCAATGGTGAAGTACG
CCTTCCGCATGCTGTTTGAGCTGGAGAGGATAAAGAACGAAGAGGACCTT
AATTTCGAAATGAGAATAGGCCTGCACACAGGACCCTGCATTGGTGGCGT
CATTGGCCGACTC
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Coding sequence (CDS) from alignment at H-paniculata_contig65:33790..34502-

>mRNA_H-paniculata_contig65.14335.1 ID=mRNA_H-paniculata_contig65.14335.1|Name=mRNA_H-paniculata_contig65.14335.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=588bp|location=Sequence derived from alignment at H-paniculata_contig65:33790..34502- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACTGTGAGGTTGGACCTGCGGGAAAACGTCCCAAGCAGGTGTACAC
GGCATTCGACACACATCTTGACGGGCTTGGGGTATACAAGCTGGACACTA
TCGGCGACGCTTTCGTCGTTGTCGCCGGTCTTGACGGTTTCAAATCGAAA
GAGATGAACTGTGAGGTTGGACCTGCGGGAAAACGTCCCAAGCAGGTGTA
CACGGCATTCGACACACATCTTGACGGGCTTGGGGTATACAAGCTGGACA
CTATCGGCGACGCTTTCGTCGTTGTCGCCGGTCTTGACGGTTTCAAATCG
AAAGAGGATCACGCGATGGCAATGGTGAAGTACGCCTTCCGCATGCTGTT
TGAGCTGGAGAGGATAAAGAACGAAGAGGACCTTAATTTCGAAATGAGAA
TAGGCCTGCACACAGGACCCTGCATTGGTGGCGTCATTGGCCGACTCGAT
CACGCGATGGCAATGGTGAAGTACGCCTTCCGCATGCTGTTTGAGCTGGA
GAGGATAAAGAACGAAGAGGACCTTAATTTCGAAATGAGAATAGGCCTGC
ACACAGGACCCTGCATTGGTGGCGTCATTGGCCGACTC
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