prot_H-paniculata_contig6467.14295.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6467.14295.1
Unique Nameprot_H-paniculata_contig6467.14295.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length235
Homology
BLAST of mRNA_H-paniculata_contig6467.14295.1 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 3.650e-26
Identity = 85/193 (44.04%), Postives = 106/193 (54.92%), Query Frame = 0
Query:   15 RRGNLLEVDGR-GTAHI-----ECSMNEEAAGSTDEEEHAEAQDVNDSDKTVVVAA-ADGDDHDDGSVGKDPRNDADKRPTFFFSLKEMVGAGGPLRKGDELEFLVPA----------GKVVEAGRRAVGAIRVQDLKSLSGTRQRLNLNLRDAQKGPQVRMAQGPDGAGFRPGYRATLSLYAGSAPTPAVAD 190
            RRG +L+VD + G AH+     +C   ++A+    +EE        + D T  VA  AD       S   D           FF LKEMVGA GPLR GDE++ ++P           G     G  AVGA+R  DLKSLSG RQRLN+NLRD+QKGPQVRMA GPDG GF+ G+RA+ SLY  +A  P   D
Sbjct: 1352 RRGKVLQVDAKAGVAHVALLQGQCQDADQASTDKPKEEK-------EVDATAEVATTADDATTPPASSPADSSTAEGASSRVFFLLKEMVGAAGPLRNGDEVDLVLPTPLPRMASQTKGGKPPGGVHAVGAVR--DLKSLSGARQRLNINLRDSQKGPQVRMALGPDGNGFKQGHRASQSLYEKAATVPPSTD 1535          
BLAST of mRNA_H-paniculata_contig6467.14295.1 vs. uniprot
Match: D7FPP6_ECTSI (CSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP6_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 3.960e-23
Identity = 80/188 (42.55%), Postives = 102/188 (54.26%), Query Frame = 0
Query:   15 RRGNLLEVDGR-GTAHIECSMNE-EAAGSTDEEEHAEAQDVNDSDKTVVVAAADGDDHDDGSVGKDPRNDADKRPTFFFSLKEMVGAGGPLRKGDELEFLVPA----------GKVVEAGRRAVGAIRVQDLKSLSGTRQRLNLNLRDAQKGPQVRMAQGPDGAGFRPGYRATLSLYAGSAPTPAVAD 190
            RRG +L+VD + G A++E    + + A     E+  E ++V+ +    V   AD       S   D           FF LKEMVGA GPLR GDE++ ++P           G     G  AVGA    DLKSLSG RQRLN+ LRD+QKGPQVRMA GPDG GF+ G+RA+ SLY  +A  P   D
Sbjct:  818 RRGKVLQVDAKAGVAYVELLQVQCQDADQASTEKPKEEKEVDAA--AEVATTADAATAPPASRLTDSSTAEGASSRVFFLLKEMVGAAGPLRNGDEVDLMLPTPLQRVALQTKGGKSPGGVHAVGA----DLKSLSGARQRLNITLRDSQKGPQVRMALGPDGNGFKQGHRASQSLYEKAATVPPSTD 999          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6467.14295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4Q3_9PHAE3.650e-2644.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPP6_ECTSI3.960e-2342.55CSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6467contigH-paniculata_contig6467:1373..5235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6467.14295.1mRNA_H-paniculata_contig6467.14295.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6467 421..7719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6467.14295.1 ID=prot_H-paniculata_contig6467.14295.1|Name=mRNA_H-paniculata_contig6467.14295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=235bp
MLSSFFFSLFPKTLRRGNLLEVDGRGTAHIECSMNEEAAGSTDEEEHAEA
QDVNDSDKTVVVAAADGDDHDDGSVGKDPRNDADKRPTFFFSLKEMVGAG
GPLRKGDELEFLVPAGKVVEAGRRAVGAIRVQDLKSLSGTRQRLNLNLRD
AQKGPQVRMAQGPDGAGFRPGYRATLSLYAGSAPTPAVADSSPTEGTDNA
QAEIPIELENQGGDGGGADGVVEGDGTVEAVDET*
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