prot_H-paniculata_contig64622.14290.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig64622.14290.1
Unique Nameprot_H-paniculata_contig64622.14290.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length108
Homology
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 114 bits (284), Expect = 3.790e-27
Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = 0
Query:    5 NMGRKYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKPWVGVFLGYDEDSPSYRIHHPENKSIQLSRNVRFDE 107
             + + +W EA   +VY L+ +P +   G TP+E WHG TP ++HL+VFGC  Y +    +R KLD K  VG+FLGY   S  YRI++P  K I +SRNV+FDE
Sbjct:  578 GLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680          
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Match: A0A177U095_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U095_9BASI)

HSP 1 Score: 106 bits (264), Expect = 1.880e-24
Identity = 47/105 (44.76%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    5 NMGRKYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLRVFGCTAYVMFQSQQRR-KLDDKPWVGVFLGYDEDSPSYRIHHPENKSIQLSRNVRFDEE 108
            N+   YW EA   A Y  +  P +P  G TP+E W+GT P++DHLR+FGC A+VM   + R   L  +  VGVF+GYD+ S  YR+H P+  ++ +SRNV F E+
Sbjct:  338 NLPLVYWAEAASTAAYLRNHRPSRPLGGKTPFELWYGTPPRIDHLRIFGCLAFVMLPDKAREHSLSARARVGVFIGYDKYSKGYRVHFPDTGALAISRNVDFHED 442          
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Match: A0A251UIF2_HELAN (Integrase catalytic domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UIF2_HELAN)

HSP 1 Score: 99.8 bits (247), Expect = 3.750e-22
Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    1 MTTANMGRKYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKPWVGVFLGYDEDSPSYRIHHPENKSIQLSRNVRFDE 107
            M    +   YW EA   A Y L+    +     TPYE W+G  P ++HL+VFGC AYV    Q+R KLD K    VF+GY E+S  Y++++P++  I +SR+V FDE
Sbjct:  612 MNAKELPNCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYNPQSNKIIISRDVVFDE 718          
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Match: A0A251SKN6_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SKN6_HELAN)

HSP 1 Score: 99.4 bits (246), Expect = 5.180e-22
Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    1 MTTANMGRKYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKPWVGVFLGYDEDSPSYRIHHPENKSIQLSRNVRFDE 107
            M    +   YW EA   A Y L+    +     TPYE W+G  P ++HL+VFGC AYV    Q+R KLD K    VF+GY E+S  Y++++P++  I +SR+V FDE
Sbjct: 1364 MNAKELPTCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYNPQSNKIIISRDVVFDE 1470          
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Match: A0A251UCI2_HELAN (Putative ribonuclease H-like domain, Reverse transcriptase, RNA-dependent DNA polymerase n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UCI2_HELAN)

HSP 1 Score: 95.1 bits (235), Expect = 1.530e-20
Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    5 NMGRKYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKPWVGVFLGYDEDSPSYRIHHPENKSIQLSRNVRFDE 107
            NM + +W EA R A+Y L+ VP +     TP+E   G  P L+HL+VFGCTAY      Q++KLDD+    V+LG +E S +YR++ P    I +SR+V+F E
Sbjct:  168 NMPQNFWGEAVRHAIYVLNRVPTKALVNKTPFEALKGRKPNLEHLKVFGCTAYAKVLPLQQKKLDDRSAPMVYLGIEEGSKAYRLYDPAKNKICVSRDVKFME 270          
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Match: A0A251UNU7_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UNU7_HELAN)

HSP 1 Score: 95.1 bits (235), Expect = 1.580e-20
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    1 MTTANMGRKYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKPWVGVFLGYDEDSPSYRIHHPENKSIQLSRNVRFDE 107
            M    +   YW EA   A Y L+    +     TPYE W+G+ P ++HLRVFGC AYV    Q+R KL+ K    VF+GY + S  YR+++P    I +SR+V FDE
Sbjct:  975 MNAKQLSDCYWAEAIACATYILNRTVTKTRPDTTPYEAWNGSKPNVEHLRVFGCLAYVHIPKQRRDKLNMKTEKTVFVGYSDRSKGYRLYNPLTNKIIISRDVVFDE 1081          
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Match: A0A0L7QJB2_9HYME (Copia protein (Fragment) n=1 Tax=Habropoda laboriosa TaxID=597456 RepID=A0A0L7QJB2_9HYME)

HSP 1 Score: 89.0 bits (219), Expect = 2.410e-20
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 0
Query:    1 MTTANMGRKYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKPWVGVFLGYDEDSPSYRIHHPENKSIQLSRNVRFD 106
            +  + +  ++W EA  AA Y  + +  + H G TPYE WH   P + H++ FGC AYV+ +   R+K D K   G F+GY+E+  +YR++ PE  SI+   +VRFD
Sbjct:   33 LADSKLSLRFWGEAANAAAYTRNRIKSRVH-GKTPYEVWHQRKPNVQHMKRFGCMAYVLSKGGTRKKFDSKIKRGFFVGYNENK-TYRVYIPETNSIKCDCDVRFD 136          
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Match: A0A2I0AIC1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AIC1_9ASPA)

HSP 1 Score: 94.4 bits (233), Expect = 2.750e-20
Identity = 41/99 (41.41%), Postives = 62/99 (62.63%), Query Frame = 0
Query:    9 KYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKPWVGVFLGYDEDSPSYRIHHPENKSIQLSRNVRFDE 107
            ++W E+   AVY L+  P +     TPYE W G  P++ HL++FGC AYV   S  R KL+DK    +F+GY   S +YR+++P +K + +SR+V F+E
Sbjct:   14 QFWAESVATAVYLLNISPTKAVLNRTPYEVWKGRKPRISHLKIFGCIAYVYVNSHDRHKLEDKSEKCIFIGYCPQSKAYRLYNPCSKKLIISRSVIFEE 112          
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Match: A0A0A9YYY8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9YYY8_LYGHE)

HSP 1 Score: 86.7 bits (213), Expect = 8.840e-20
Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 0
Query:    5 NMGRKYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKPWVGVFLGYDEDSPSYRIHHP 92
            +M +++W EA   AVY ++  P +     TP+E+W+G+ P L+HLRVFGC AY     ++RRKLD K    VF+GY + +  YR+  P
Sbjct:   30 DMDKRFWAEAANTAVYLMNVSPTKRLKNVTPHERWYGSKPNLEHLRVFGCDAYGHIPDEKRRKLDPKAKPLVFVGYGDCTKGYRLFDP 117          
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Match: A0A507DRP7_9FUNG (DNA-directed DNA polymerase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DRP7_9FUNG)

HSP 1 Score: 91.7 bits (226), Expect = 1.290e-19
Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 0
Query:    4 ANMGRKYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLRVFGCTAYVMFQSQQRRKLDDKPWVGVFLGYDEDSPSYRIHHPENKSIQLSRNVRFDE 107
            A++   +W EA   A Y L+ +P + +   TP+E W G  PKLDHL++ GCTAY+      + KL  + W GV +GY   SP+YRI +P   SI  +R+VRFDE
Sbjct:    9 AHLTLDFWAEAWNTANYLLNRLPARGYTK-TPFEAWTGIKPKLDHLKLIGCTAYIT-PVPMKDKLLPRSWTGVLVGYGLSSPTYRIWNPATSSIVETRDVRFDE 110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig64622.14290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151T355_CAJCA3.790e-2746.60Retrovirus-related Pol polyprotein from transposon... [more]
A0A177U095_9BASI1.880e-2444.76Integrase catalytic domain-containing protein n=2 ... [more]
A0A251UIF2_HELAN3.750e-2242.06Integrase catalytic domain-containing protein n=1 ... [more]
A0A251SKN6_HELAN5.180e-2242.06Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A251UCI2_HELAN1.530e-2043.69Putative ribonuclease H-like domain, Reverse trans... [more]
A0A251UNU7_HELAN1.580e-2042.06Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A0L7QJB2_9HYME2.410e-2038.68Copia protein (Fragment) n=1 Tax=Habropoda laborio... [more]
A0A2I0AIC1_9ASPA2.750e-2041.41Retrovirus-related Pol polyprotein from transposon... [more]
A0A0A9YYY8_LYGHE8.840e-2042.05Retrovirus-related Pol polyprotein from transposon... [more]
A0A507DRP7_9FUNG1.290e-1943.27DNA-directed DNA polymerase n=1 Tax=Powellomyces h... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 4..107
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig64622contigH-paniculata_contig64622:188..511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig64622.14290.1mRNA_H-paniculata_contig64622.14290.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig64622 182..511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig64622.14290.1 ID=prot_H-paniculata_contig64622.14290.1|Name=mRNA_H-paniculata_contig64622.14290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp
MTTANMGRKYWVEATRAAVYCLDPVPMQPHNGGTPYEKWHGTTPKLDHLR
VFGCTAYVMFQSQQRRKLDDKPWVGVFLGYDEDSPSYRIHHPENKSIQLS
RNVRFDEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like