mRNA_H-paniculata_contig6461.14287.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Match: A0A7J4IJL3_9EURY (Probable pectate lyase C (Fragment) n=1 Tax=Methanoregulaceae archaeon TaxID=2485498 RepID=A0A7J4IJL3_9EURY) HSP 1 Score: 96.3 bits (238), Expect = 4.880e-21 Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 55 TPPPIPA--TALTG---IPGLVEAEEYDDGGQGVAYSDTEPANLGGAFRPDEGVDISTTVGGFYVGWTRSTEYLRYSVNVTTP 288
TPPP PA G +PG VEAE++D GG+G+AY D+EPANLGGA+RP EGVDI T+ G VGW RS E+L Y+VN T P
Sbjct: 121 TPPPTPAGPRPYPGPHVVPGTVEAEDFDAGGEGIAYHDSEPANLGGAYRPAEGVDIETSGGITNVGWVRSGEWLNYTVNATAP 203
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Match: A0A3N5XWJ2_9BACT (Carbohydrate-binding protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3N5XWJ2_9BACT) HSP 1 Score: 92.4 bits (228), Expect = 1.090e-19 Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 55 TPPPIPATALTGIPGLVEAEEYDDGGQGVAYSDTEPANLGGAFRPDEGVDISTTVGGFYVGWTRSTEYLRYSVNVTTPG 291
TP P TA++ +PG +EAE +D+GG GVAYSDT PANLGGA+RP E VD+ + G + VGW + E+L YSVNV T G
Sbjct: 397 TPTPYLGTAVS-LPGTIEAENFDNGGSGVAYSDTSPANLGGAYRPTEAVDLEGSAGRYNVGWIDTGEWLLYSVNVGTAG 474
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Match: D7FGU3_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU3_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 1.530e-19 Identity = 48/98 (48.98%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 10 SIFKKVDELETVDYPTPPP---IPATALTG----IPGLVEAEEYDDGGQGVAYSDTEPANLGGAFRPDEGVDISTTVGGFYVGWTRSTEYLRYSVNVT 282
S + DE++ + P P P +P A G IPG +E EE+D GG+GV YSDT+ N GG FRP E VDIS G+ VGW RS EYLRY+++VT
Sbjct: 734 STYCSHDEVDLAEPPIPTPAPVVPTGAFDGVPATIPGRIEGEEFDYGGEGVGYSDTDAGNNGGQFRPSENVDISINGDGYNVGWMRSGEYLRYTIDVT 831
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Match: D7FTA2_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA2_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 3.900e-19 Identity = 49/91 (53.85%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 52 PTPPPIPATALTG--------IPGLVEAEEYDDGGQGVAYSDTEPANLGGAFRPDEGVDI-STTVGGFYVGWTRSTEYLRYSVNVTTPGDA 297
PTP P A G IPG +EAEE+D+GGQG AY D + N GGAFR E VDI +TT GG YVGWTR+ E+ RY+V+V T DA
Sbjct: 928 PTPAPTAAELQGGAYLDNPAVIPGKIEAEEFDEGGQGAAYYDVDAGNNGGAFRTTEDVDIKATTAGGHYVGWTRAGEFTRYTVDVRTAADA 1018
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Match: B8GHS2_METPE (Periplasmic copper-binding n=2 Tax=Methanosphaerula palustris TaxID=475088 RepID=B8GHS2_METPE) HSP 1 Score: 89.7 bits (221), Expect = 9.840e-19 Identity = 44/73 (60.27%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 70 PATALTGIPGLVEAEEYDDGGQGVAYSDTEPANLGGAFRPDEGVDISTTVGGFYVGWTRSTEYLRYSVNVTTP 288
P + +PGLV+A +YD GG+GVAY DTEPANLGGA+RP EGVDI T VGW R E+L Y+VNVT P
Sbjct: 53 PYPGIHPVPGLVQARDYDLGGEGVAYHDTEPANLGGAYRPAEGVDIETAGLFTDVGWIRDGEWLDYTVNVTEP 125
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Match: UPI001CC6BEB2 (putative Ig domain-containing protein n=1 Tax=Ferruginibacter sp. KIS38-8 TaxID=2875540 RepID=UPI001CC6BEB2) HSP 1 Score: 89.4 bits (220), Expect = 1.380e-18 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 40 TVDYPTPPPIPATALTGIPGLVEAEEYDDGGQGVAYSDTEPANLGGAFRPDEGVDISTTV-GGFYVGWTRSTEYLRYSVNVTTPG 291
TV P P TA IPG +EAE+YD GG+G+AY D + AN GG +RP EGVDI T GG+ VGWT + E++ Y+VNV T G
Sbjct: 1111 TVSNPPQAPYGGTARA-IPGKIEAEDYDTGGEGIAYHDNDVANSGGQYRPSEGVDIETCADGGYNVGWTNAGEWMEYTVNVATAG 1194
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Match: A0A7J4IR70_9EURY (Carbohydrate-binding protein n=1 Tax=Methanoregulaceae archaeon TaxID=2485498 RepID=A0A7J4IR70_9EURY) HSP 1 Score: 89.0 bits (219), Expect = 1.790e-18 Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 91 IPGLVEAEEYDDGGQGVAYSDTEPANLGGAFRPDEGVDISTTVGGFYVGWTRSTEYLRYSVNVTTP 288
+PG VE +++D GG+GVAY DTEPANLGG +RP EGVDI T G VGW RS E+L Y+V TTP
Sbjct: 72 VPGTVEPQDFDLGGEGVAYHDTEPANLGGTYRPTEGVDIETVEGFTDVGWIRSGEWLTYTVTATTP 137
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Match: A0A250I799_9DELT (Endo-1,4-beta-xylanase n=5 Tax=Archangiaceae TaxID=39 RepID=A0A250I799_9DELT) HSP 1 Score: 88.6 bits (218), Expect = 2.060e-18 Identity = 39/69 (56.52%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 91 IPGLVEAEEYDDGGQGVAYSDTEPANLGGAFRPDEGVDISTTV-GGFYVGWTRSTEYLRYSVNVTTPGD 294
IPGL++AE+YD+GGQ ++YSD P N GGA+RP EGVD+ GGF+VGW S+E+ Y+VNV T G+
Sbjct: 326 IPGLIQAEDYDNGGQSISYSDGSPQNEGGAYRPSEGVDVGAIPSGGFHVGWVSSSEWAEYTVNVATSGN 394
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Match: A0A6H5JFJ7_9PHAE (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ7_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 4.640e-18 Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = 1
Query: 10 SIFKKVDELETVDYPTPPPIPAT---ALTGIP----GLVEAEEYDDGGQGVAYSDTEPANLGGAFRPDEGVDISTTVGGFYVGWTRSTEYLRYSVNVT 282
S + DE++ + P P P PA A GIP G VE EE+D GG+GV YSDT+ N GG FR E VDIS G+ VGW S EYLRY+++VT
Sbjct: 554 STYCSHDEVDLAEPPIPTPAPAVPTGAFEGIPATIPGRVEGEEFDYGGEGVGYSDTDAGNNGGQFRTSENVDISINGDGYNVGWMSSGEYLRYTIDVT 651
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Match: S9QLE2_9DELT (Endo-1,4-beta-xylanase A n=3 Tax=Cystobacter TaxID=42 RepID=S9QLE2_9DELT) HSP 1 Score: 87.4 bits (215), Expect = 5.310e-18 Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 73 ATALTGIPGLVEAEEYDDGGQGVAYSDTEPANLGGAFRPDEGVDISTTV-GGFYVGWTRSTEYLRYSVNVTTPG 291
AT L IPG ++AE+YD+G QGVAYSD P N GGA+RP+EGVD+ GGF VGW S+E++ Y+VNV T G
Sbjct: 321 ATPLA-IPGQIQAEDYDNGAQGVAYSDGSPQNEGGAYRPNEGVDVGAIPSGGFNVGWVSSSEWVEYTVNVATSG 393 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6461.14287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6461.14287.1 >prot_H-paniculata_contig6461.14287.1 ID=prot_H-paniculata_contig6461.14287.1|Name=mRNA_H-paniculata_contig6461.14287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp MFLSIFKKVDELETVDYPTPPPIPATALTGIPGLVEAEEYDDGGQGVAYSback to top mRNA from alignment at H-paniculata_contig6461:11461..12245+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6461.14287.1 ID=mRNA_H-paniculata_contig6461.14287.1|Name=mRNA_H-paniculata_contig6461.14287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=785bp|location=Sequence derived from alignment at H-paniculata_contig6461:11461..12245+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6461:11461..12245+ >mRNA_H-paniculata_contig6461.14287.1 ID=mRNA_H-paniculata_contig6461.14287.1|Name=mRNA_H-paniculata_contig6461.14287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at H-paniculata_contig6461:11461..12245+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |