mRNA_H-paniculata_contig6401.14208.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Match: D7G5A2_ECTSI (Probable chromatin remodelling complex ATPase chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A2_ECTSI) HSP 1 Score: 843 bits (2178), Expect = 3.160e-289 Identity = 463/611 (75.78%), Postives = 512/611 (83.80%), Query Frame = 1
Query: 1 IKSAGTAYSYFMSEQYREHKDEFAGLGFGHAGAEISRRWNALDETGKVKFEELATKDRARYHRECRTRDEEVAARQAASREARFAEPVSQSYMRERAAPEPRRERRVTREEDMSEEQLEARRMLKEKREKQKAARLAGEAESSRQKETIAAAAAAMARKRIKYILRQSDIFATHFGVAVSEXXXXXXXXXXXXXXGADGATSNGAAAAGGSPSKRRGRPSGREGEDSTEADANSGEEAAPTYLVQQPPSISGGTLRSYQLEGLNWMINLQAQGTNGILADEMGLGKTLQSISILAYMRDFRKVDGPHIILLPKSVLGNWELEFKRFCPSVKVLRLSGTKEERATIIRDEVRPGGLEEERRWDVLLTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQARAPSLPNNLHELWALLNFLLPSVFKDSEAFSKVFDLNVDDADKKQNMITQLHKILRPFMLRRLKKDVEKSLPPKEETILFTGMSEMQRRVYKGVLMRDIDTVNGSNAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMVLLDKLLKRLKELGHRVLVFSQMTRQIDILEDLMHMR 1833
+K+A +AY +F +QY HKDEFAGL G GAEISRRW L + + +F+ LA +DR R+ E RD EVAARQ A+R AR+A+P S +YMRERA+ EP++ER+VTREEDMSEE+LEARR+ KEKR KQK ARLA EAE ARKRIKYILRQSDIFATHFGVA+S+ XXXXXXXXXXXXX GGSPSKRR +GR D D N GE+ APTYL +QPPSISGGT+RSYQLEGLNWM+NLQAQGTNGILADEMGLGKTLQSISILAYMRDF+ V GPHIILLPKSVLGNW+LEFKRFCP ++VLRLSGTK+ERA IR++++PG E+ER WDVL+TTYEVANIEKT LNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQ NNLHELWALLNFLLP+VF+DSEAFSKVFDLNVDDADKKQNMI QLHKILRPFMLRRLKK+VEKSLPPKEETILFT MSE+QR+VYKGVLMRDIDT+NG++AGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKM+LLDKLL RLK GHRVLVFSQMTR +DILEDLMHMR
Sbjct: 13 VKAATSAYMFFQGDQYSNHKDEFAGLALGQQGAEISRRWRELPQEERSRFDALAAEDRKRFQEESEARDAEVAARQEANRAARYADPASSTYMRERASVEPKKERKVTREEDMSEERLEARRLAKEKRAKQKDARLAAEAEXXXXXXXXXXXXXXXARKRIKYILRQSDIFATHFGVALSDSXXXXXXXXXXXXXXXXXXXXX----XGGSPSKRR--QAGRGAADEAMDDVN-GEDTAPTYLTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGTKDERAATIRNDLKPGSPEDERDWDVLVTTYEVANIEKTYLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQ-------NNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADKKQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGTSAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDILEDLMHMR 609
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Match: A0A7S1XV30_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XV30_9STRA) HSP 1 Score: 565 bits (1457), Expect = 1.110e-183 Identity = 336/632 (53.16%), Postives = 418/632 (66.14%), Query Frame = 1
Query: 4 KSAGTAYSYFMSEQYREHKDEFAGLGFGHAG---AEISRRWNALDETGKVKFEELATKDRARYHRECRTRD---EEVAARQAASREARFAEPVSQSYM----RERAAPEPRRERRVTREEDMSEEQLEARRMLKEKREKQKAARLAGEAESSRQKETIAAAAAAMARKRIKYILRQSDIFATHFGVAVSEXXXXXXXXXXXXXXGADGATSNGAAAAGG--------SPSKRRGRPSGREGEDSTEADANS---GEEAAPTYLVQQPPSISGGTLRSYQLEGLNWMINLQAQGTNGILADEMGLGKTLQSISILAYMRDFRKVDGPHIILLPKSVLGNWELEFKRFCPSVKVLRLSGTKEERATIIRDEVRPGGLEEERRWDVLLTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQARAPSLPNNLHELWALLNFLLPSVFKDSEAFSKVFDLNVDDADKKQNMITQLHKILRPFMLRRLKKDVEKSLPPKEETILFTGMSEMQRRVYKGVLMRDIDTVNGSN-AGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMVLLDKLLKRLKELGHRVLVFSQMTRQIDILEDLMHMR 1833
+ A +AY+ F +E++ K+ GLG G G I++RW L K KFE+LA +D+ARY E D EE A++ A EA P ++ + +RAAP R+ R V+ E + KR +Q+AAR A EAE + E A A A +R++Y+L+QSDIF HFG G A+AAGG SPSKRR EG+ + + + E AA T+L++QP +I G LR YQLEGLNW+I LQ G NGILADEMGLGKTLQSISIL+YM ++R V GPH++L+PKS L NW EF+RFCPS+K L+ G+KE+R +I ++++PG ER WDVL+TTYE+ANIEK ++ K GW+YLIIDEAHRLKNE+S+FS TVR ++T+YRLL+TGTPLQ NNLHELWALLNFLLP VF SE F + FDL+VDD + K MI QLHK+LRPFMLRRLK DVEKSLPPK ETILFTGMS Q++VYK VL RD+D + N AG+T + NIVMQLRK CNHPYLFP EDR+LDP+GEHLV NCGKMVLLDKLL+ LK G RVL+F+QMTRQ+DI EDLMHMR
Sbjct: 10 RRARSAYAIFQAEEHGRLKESGEGLGGGGLGDVAKAIAKRWQELTPEEKSKFEKLAAEDKARYEAESAAADAAAEEAQAKRRADLEADVTGPRKRTQLVPAEAKRAAP--RKPRVVSAE-------------VTAKRAEQRAAREAREAEIDKAHEENKAFIARQAEQRLQYLLKQSDIFQ-HFG---------------------KGTKQEAASAAGGAATDDTPMSPSKRRASVDEAEGDANGDGEGGRDTPSEGAANTFLLRQP-TILQGQLRPYQLEGLNWLIRLQENGVNGILADEMGLGKTLQSISILSYMLEYRNVRGPHLVLVPKSTLSNWMNEFRRFCPSLKPLKFHGSKEQRRELIEEKIKPGSPASERDWDVLVTTYEIANIEKGTIIKFGWQYLIIDEAHRLKNEASIFSRTVRMMSTRYRLLITGTPLQ-------NNLHELWALLNFLLPDVFASSEQFDEWFDLDVDDDEAKTRMIKQLHKLLRPFMLRRLKADVEKSLPPKSETILFTGMSAAQKKVYKSVLRRDVDALLEDNKAGKTQLQNIVMQLRKACNHPYLFPGVEDRSLDPLGEHLVTNCGKMVLLDKLLRNLKSRGSRVLIFTQMTRQLDIFEDLMHMR 596
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Match: A0A4Q3BVS4_9BACT (DEAD/DEAH box helicase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3BVS4_9BACT) HSP 1 Score: 516 bits (1329), Expect = 2.810e-176 Identity = 263/394 (66.75%), Postives = 309/394 (78.43%), Query Frame = 1
Query: 667 EGEDSTEADANSGEEAAPTYLVQQPPSISGGTLRSYQLEGLNWMINLQAQGTNGILADEMGLGKTLQSISILAYMRDFRKVDGPHIILLPKSVLGNWELEFKRFCPSVKVLRLSGTKEERATIIRDEVRPGGLEEERRWDVLLTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQARAPSLPNNLHELWALLNFLLPSVFKDSEAFSKVFDLNVDDADKKQNMITQLHKILRPFMLRRLKKDVEKSLPPKEETILFTGMSEMQRRVYKGVLMRDIDTVNG-----SNAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMVLLDKLLKRLKELGHRVLVFSQMTRQIDILEDLMHMR 1833
EG+D EA +S T L +QP SI+GG LR YQLEGLNWMI LQ G NGILADEMGLGKTLQSISILAY+R+F+KVDGPH+I++PKS L NW+ EFKRFCP V+VL G+K+ER II + +RP + R WDV++TTYEV N+EK +L KI WRYLIIDEAHRLKNE+S FS TVR L TQ+RLLLTGTPLQ NNLHELWALLNFLLP VF SE F F+L+VDD KQ MI+QLHK+LRPFMLRRLK DVE SLPPK ETILFTGMS +Q+ +Y+ +L+RDIDT+N S RTAILNIVMQLRKCCNHPYLFP+ EDR+LDP+G+HL NCGKMVL+DKLL+++KE GHRVL+FSQMTR +DI+ED + R
Sbjct: 10 EGDDEGEAPPHS------TVLSKQPSSITGGLLRDYQLEGLNWMIRLQENGINGILADEMGLGKTLQSISILAYLREFKKVDGPHLIMVPKSTLSNWQREFKRFCPVVRVLCFHGSKDERQEIINERLRPAA-QGIRDWDVVVTTYEVLNLEKGALMKIAWRYLIIDEAHRLKNEASQFSQTVRLLNTQHRLLLTGTPLQ-------NNLHELWALLNFLLPDVFASSEQFDDWFNLDVDDTAAKQRMISQLHKLLRPFMLRRLKADVESSLPPKSETILFTGMSTLQKTLYRQILLRDIDTINSAGSSNSQQSRTAILNIVMQLRKCCNHPYLFPSVEDRSLDPLGDHLFANCGKMVLMDKLLRKMKERGHRVLIFSQMTRMLDIMEDYLISR 389
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Match: A0A7S1BX47_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BX47_9STRA) HSP 1 Score: 537 bits (1383), Expect = 1.500e-172 Identity = 308/593 (51.94%), Postives = 390/593 (65.77%), Query Frame = 1
Query: 85 GHAGAEISRRWNALDETGKVKFEELATKDRARYHRECRTRDEEVAARQAASREARFAEPVSQSYMRERAAP------EPRRERRVTREEDMSEEQLEARRMLK-EKREKQKAARLAGEAESSRQKETIAAAAAAMARKRIKYILRQSDIFATHFGVAVSEXXXXXXXXXXXXXXGADGATSNGAAAAGGSPSKRRGRPSGREGEDSTEADANSGEEAAPTYLVQQPPSISGGTLRSYQLEGLNWMINLQAQGTNGILADEMGLGKTLQSISILAYMRDFRKVDGPHIILLPKSVLGNWELEFKRFCPSVKVLRLSGTKEERATIIRDEVRPGGLEEERRWDVLLTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQARAPSLPNNLHELWALLNFLLPSVFKDSEAFSKVFDLNVDDADKKQNMITQLHKILRPFMLRRLKKDVEKSLPPKEETILFTGMSEMQRRVYKGVLMRDIDTVNGSNA---GRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMVLLDKLLKRLKELGHRVLVFSQMTRQIDILEDLMHMR 1833
G +S RW+ALD+ GK + A DR R+ E RD E+A RQAA+REAR VS R +A + +R + +SEE+L +R M + EK EK K + QKE + AA A+KR++Y+L+QSDIF HFG + T GA A + + G S E +TE +A + +L QP ++ GT+R+YQ+EGLNWMI LQ G NGILADEMGLGKTLQSIS+L YM +F+ + GPH+I++PKS L NW E KR+ P+++ LR G+KE+R II ++PG ++ER WD+ +TTYEV N EK +++KI W YLIIDEAHRLKNE+S FS TVR T+YRLLLTGTPLQ NNLHELWALLNFL+P VF S+ F + F+L+ +D + K +I QLHKILRPFMLRRLK DVEKSLPPK ETIL+ GMS++Q+++YK +LMRDID + G+ A G+TA+LNIVMQLRKC HPYLFP EDR L P+GEHLVENCGKMVLLDKLL RLKE GHRVLVF+QMT+ +DILED + MR
Sbjct: 11 GEVTRAVSERWHALDDDGKEHYHNQAFDDRIRFQTEAAERDREIAERQAAAREARNNFSVSDEPRRSKARNAYNSNLDYEESKRPIQHRQISEEELASRNMKRREKAEKDK--------RINDQKEVLRKERAAQAKKRLQYLLKQSDIFE-HFGNVKEDGIVKKNKKD----------TKEGADIAEITRHRHVGELSRHE---NTEEEAVQEAVSDAVFLTSQPTTLGFGTMRAYQVEGLNWMIGLQENGVNGILADEMGLGKTLQSISVLVYMLEFQDIPGPHLIVVPKSTLSNWMNEIKRWAPTLRGLRFHGSKEDRQNIIETRLKPGAADDERDWDICVTTYEVVNTEKNTISKIAWHYLIIDEAHRLKNEASAFSQTVRTFETRYRLLLTGTPLQ-------NNLHELWALLNFLVPDVFASSDQFDEWFNLDTEDTEAKNKLIMQLHKILRPFMLRRLKADVEKSLPPKHETILYCGMSKIQKKLYKDILMRDIDLIQGNGAKGTGKTAVLNIVMQLRKCAGHPYLFPGVEDRTLPPLGEHLVENCGKMVLLDKLLCRLKEKGHRVLVFTQMTKVLDILEDYLVMR 574
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Match: D0MVY5_PHYIT (Chromatin-remodeling complex ATPase chain, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0MVY5_PHYIT) HSP 1 Score: 534 bits (1375), Expect = 1.040e-171 Identity = 314/620 (50.65%), Postives = 406/620 (65.48%), Query Frame = 1
Query: 10 AGTAYSYFMSEQYREHKDEFAG--------LGFGHAGAEISRRWNALDETGKVKFEELATKDRARYHRECRTRDEEVAARQAASREARFAEPVSQSYMRERAAPEPRRERRVTREEDMSEEQLEARRMLKEKREKQKAARLAGEAESSRQKETIAAAAAAMARKRIKYILRQSDIFATHFGVAVSEXXXXXXXXXXXXXXGADGATSNGAAAAGGSPSKR-RGRPSG-REGEDSTEADANSGEEAAPTYLVQQPPSISGGTLRSYQLEGLNWMINLQAQGTNGILADEMGLGKTLQSISILAYMRDFRKVDGPHIILLPKSVLGNWELEFKRFCPSVKVLRLSGTKEERATIIRDEVRPGGLEEERRWDVLLTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQARAPSLPNNLHELWALLNFLLPSVFKDSEAFSKVFDLNVDDADKKQNMITQLHKILRPFMLRRLKKDVEKSLPPKEETILFTGMSEMQRRVYKGVLMRDIDTVNGSNAG--RTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMVLLDKLLKRLKELGHRVLVFSQMTRQIDILEDLMHMR 1833
A TAY +F + K + A + G EIS RW L + +F EL T D+ RY ECR RDEEV +A RE + + RER P+R+ R ++SE+QLEA+R+ E R+++ R +AE RQKE +A + +A R+KY+L QSDIFA HF V + AD G +A G SK+ +G+ + +D E D++ + QQP I GT+R+YQLEGL+WMINL QG NGILADEMGLGKTLQ+IS+LAY +F + GPHI+L+PKS L NW EFKR+CPS++ ++ G KEER +++ + PG +++R++DV +TT+E+ EKT+L K WRYLIIDEAHR+KNESS FS VR L T++RLLLTGTPLQ NNLHELWALLNFLLP VF S+ F F+L+VDD + K+ MI+QLHKILRPFMLRRLK DVEKSLPPK+ET+LF GMSEMQ+ +YK +L+RD++T+ G G ++A+ NIVMQLRKCC HPYLF EDR LDP+GEH+VENCGKMVLLDKLL +LK+ G RVL+F+QMTR +DI+ED MR
Sbjct: 28 AKTAYQFFQKRVIDDVKRDVAAKAAELNEPVELGSISKEISARWVQLSAGDREEFVELGTLDKKRYDEECRARDEEVERERARKREDMYG---AVEGKRERKKTRPKRQPR-----ELSEKQLEAKRLRHEIRQQEIDERDELKAEEKRQKEALAKKKSEIASARLKYLLSQSDIFA-HFSGQVKKGKKGAALD-------ADEDAETGEQSAEGLDSKKAKGKTKXXKRHDDEDEMDSS---RHVGVRITQQPSVIKFGTMRAYQLEGLSWMINLAHQGINGILADEMGLGKTLQTISVLAYFYEFENISGPHIVLVPKSTLSNWLAEFKRWCPSLRAVKFHGNKEERQRCVQEVLCPGLPDDKRKFDVCVTTFEMCLKEKTALCKFAWRYLIIDEAHRIKNESSQFSTVVRMLDTEHRLLLTGTPLQ-------NNLHELWALLNFLLPDVFASSQEFDDWFNLDVDDDEAKKQMISQLHKILRPFMLRRLKADVEKSLPPKKETLLFVGMSEMQKALYKSLLLRDMNTIMGGTGGVSKSALQNIVMQLRKCCGHPYLFEGQEDRTLDPLGEHVVENCGKMVLLDKLLTKLKQRGSRVLIFTQMTRVLDIMEDFCRMR 621
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Match: A0A7S2HGM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HGM0_9STRA) HSP 1 Score: 504 bits (1299), Expect = 8.860e-170 Identity = 300/587 (51.11%), Postives = 371/587 (63.20%), Query Frame = 1
Query: 85 GHAGA---EISRRWNALDETGKVKFEELATKDRARYHRECRTRDEEVAARQAASREARFAEPVSQSYMRERAAPEPRRERRVTREEDMSEEQLEARRMLKEKREKQKAARLAGEAESSRQKETIAAAAAAMARKRIKYILRQSDIFATHFGVAVSEXXXXXXXXXXXXXXGADGATSNGAAAAGGSPSKRRGRPSGREGEDSTEADANSGEEAAPTYLVQQPPSISGGTLRSYQLEGLNWMINLQAQGTNGILADEMGLGKTLQSISILAYMRDFRKVDGPHIILLPKSVLGNWELEFKRFCPSVKVLRLSGTKEERATIIRDEVRPGGLEEERRWDVLLTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQARAPSLPNNLHELWALLNFLLPSVFKDSEAFSKVFDLNVDDADKKQNMITQLHKILRPFMLRRLKKDVEKSLPPKEETILFTGMSEMQRRVYKGVLMRDIDTVNGS-NAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMVLLDKLLKRLKELGHRVLVFSQMTRQIDILEDLMHMR 1833
G AG+ +I++ W L + K KFE LA KD+ RY +EC RD EV A + A R+A A PV R RV +E E+ E A+A A+KR++Y+L QSD+F FGV V SPSKR R ED+T + + +EA PTYL QP I G +R YQLEGLNWMI LQ G NGILADEMGLGKTLQSISIL Y ++ V GPH+IL+PKS L NW EFKR+CP + LR GTKEERA +++ + PG + +R+WDV++TTYEV N+E +L KI WRYLIIDEAHR+KNE+SLFS +R L T++RLL+TGTPLQ NNLHELWALLNFL VF+ +E F ++F+L ++DA KQ MI+ LH+ILRPFMLRRLK DVEKSLPPK E ILFTGMS MQR +YK +L R++D VNG+ +G TA+ NIVMQLRK CNHPYLF EDR+LDPMG H++ENCGK+ LLDKLL++LKE HRVL+FSQMTR +DILED + M+
Sbjct: 9 GQAGSRLKQIAQEWRELGDEEKEKFELLARKDKLRYEKECAKRDSEVEADREARRKAADA-PVDGP-----------RVARVAPKEVKVREKRELTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEASAQKAKKRLQYLLSQSDVFKK-FGVVVPPTEATHEKNDDPKLPT--------------SPSKRLHRK-----EDTTGEEVDGSQEAEPTYLAIQPSCIKFGKMRPYQLEGLNWMIRLQENGVNGILADEMGLGKTLQSISILGYTAEYTDVRGPHLILVPKSTLSNWMNEFKRWCPMLNPLRFHGTKEERAEFVKEHLDPGIPQAKRKWDVIVTTYEVCNMEAKALEKITWRYLIIDEAHRIKNEASLFSKNIRLLNTEHRLLITGTPLQ-------NNLHELWALLNFL-SDVFESAEQFDELFNLEIEDASAKQGMISMLHRILRPFMLRRLKADVEKSLPPKSEVILFTGMSPMQRELYKKILRREVDIVNGTAGSGVTALQNIVMQLRKVCNHPYLFDGQEDRSLDPMGTHVIENCGKIRLLDKLLRKLKERQHRVLIFSQMTRVLDILEDFLAMQ 555
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Match: A0A0W8D9Y4_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D9Y4_PHYNI) HSP 1 Score: 509 bits (1310), Expect = 1.180e-166 Identity = 301/621 (48.47%), Postives = 398/621 (64.09%), Query Frame = 1
Query: 10 AGTAYSYFMSEQYREHKDEFAG--------LGFGHAGAEISRRWNALDETGKVKFEELATKDRARYHRECRTRDEEVAARQAASREARF-AEPVSQSYMRERAAPEPRRERRVTREEDMSEEQLEARRMLKEKREKQKAARLAGEAESSRQKETIAAAAAAMARKRIKYILRQSDIFATHFGVAVSEXXXXXXXXXXXXXXGADGATSNGAAAAGGSPSKRRGRPSGREGED-STEADANSGEEAAP-TYLVQQPPSISGGTLRSYQLEGLNWMINLQAQGTNGILADEMGLGKTLQSISILAYMRDFRKVDGPHIILLPKSVLGNWELEFKRFCPSVKVLRLSGTKEERATIIRDEVRPGGLEEERRWDVLLTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQARAPSLPNNLHELWALLNFLLPSVFKDSEAFSKVFDLNVDDADKKQNMITQLHKILRPFMLRRLKKDVEKSLPPKEETILFTGMSEMQRRVYKGVLMRDIDTVNGSNAG--RTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMVLLDKLLKRLKELGHRVLVFSQMTRQIDILEDLMHMR 1833
A TAY +F + K + A + G EIS RW L + +F ELA +D+ RY ECR RDEEV +A RE + A + + + E R +R RE ++E+QLEA+R+ +E R+++ R +AE RQKE +A + +A R+KY+L QSDIFA HF V ++G+ G++G + DA +GEE+A T + + S +R+ L WM+NL QG NGILADEMGLGKTLQ+IS+LAY +F + GPHI+L+PKS L NW EF+R+CPS++ ++ G KEER +++ + PG +++R++DV +TT+E+ EKT+L K WRYLIIDEAHR+KNESS FS VR L T++RLLLTGTPLQ NNLHELWALLNFLLP VF S+ F F+L+VDD + K+ MI+QLHKILRPFMLRRLK DVEKSLPPK+ET+LF GMSEMQ+ +YK +L+RD++T+ G G ++A+ NIVMQLRKCC HPYLF EDR+LDP+GEH+VENCGKMVLLDKLLK+LK+ G RVL+F+QMTR +DI+ED MR
Sbjct: 28 AKTAYQFFQKRVVDDVKRDVAAKAAELNEPVELGSISKEISARWAQLSAGDREEFVELAAQDKKRYDEECRARDEEVERERARKREEMYGAVEGKRERKKTQVVIEETRPKRQPRE--LTEKQLEAKRLRQEIRQQEIDERDELKAEEKRQKEALAKKKSEIASARLKYLLSQSDIFA-HFSGQV-----------------------------------KKGKTKGKKGAALDADEDAETGEESAEDTKKGKGKKTRSATMMRTKWTRRLTWMVNLAHQGINGILADEMGLGKTLQTISVLAYFYEFENITGPHIVLVPKSTLSNWLAEFERWCPSLRAVKFHGNKEERQRCVQEVLCPGLPDDKRKFDVCVTTFEMCLKEKTALCKFAWRYLIIDEAHRIKNESSQFSTVVRMLDTEHRLLLTGTPLQ-------NNLHELWALLNFLLPDVFASSQEFDDWFNLDVDDDEAKKQMISQLHKILRPFMLRRLKADVEKSLPPKKETLLFVGMSEMQKALYKSLLLRDMNTIMGGTGGVSKSALQNIVMQLRKCCGHPYLFEGQEDRSLDPLGEHVVENCGKMVLLDKLLKKLKQRGSRVLIFTQMTRVLDIMEDFCRMR 603
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Match: W7TKM9_9STRA (Putative chromatin remodelling complex atpase chain (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKM9_9STRA) HSP 1 Score: 501 bits (1291), Expect = 2.800e-166 Identity = 271/462 (58.66%), Postives = 323/462 (69.91%), Query Frame = 1
Query: 460 AAMARKRIKYILRQSDIFATHFGVAVSEXXXXXXXXXXXXXXG--ADGATSNGAAAAGGSPSKRRGRPSGREGEDSTEADANSGEEAAPTYLVQQPPSISGGTLRSYQLEGLNWMINLQAQGTNGILADEMGLGKTLQSISILAYMRDFRKVDGPHIILLPKSVLGNWELEFKRFCPSVKVLRLSGTKEERATIIRDEVRPGGLEEERRWDVLLTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQARAPSLPNNLHELWALLNFLLPSVFKDSEAFSKVFDLNVDDADKKQNMITQLHKILRPFMLRRLKKDVEKSLPPKEETILFTGMSEMQRRVYKGVLMRDIDTVNGSN-AGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMVLLDKLLKRLKELGHRVLVFSQMTRQIDILEDLMHMRG 1836
A A R++++LRQSDIF THFG+ + G A GA AAAA + D G EA +L+ QPPSI G LR YQLEGLNWMI LQ G NGILADEMGLGKTLQSIS+LAY +F GPH+IL+PKS L NW EF+++CPS++VLR G+K+ERA +I + + PG ER WDVLLTTYE+ N+EK +L+K W+YLIIDEAHRLKNE+S FS TVR L T +RLL+TGTPLQ NNLHELWALLNFLLP VF S+ F F+L +DDA++KQ +ITQLHKILRPFMLRRLK DVEKSLP K ET++F M QR YK +L RD+ + GS AGRTA+LN+VMQLRK CNHPYLF EDR LDP+G+H+++NCGKM LLDKLLK+LKE GHRVLVF QMTR +DILED M+MRG
Sbjct: 185 AKQAEARLQFLLRQSDIF-THFGLTGGKTTKAGVKKEQGEGSGTSAVGAKHRRAAAA------------------DEDEDMEGGPEAH--FLLAQPPSIKHGQLRPYQLEGLNWMIRLQDNGINGILADEMGLGKTLQSISVLAYNAEFLNTTGPHLILVPKSTLSNWCNEFRKWCPSLRVLRFHGSKDERADLIAERLSPGT---ERDWDVLLTTYEICNLEKGALSKFAWQYLIIDEAHRLKNEASQFSQTVRMLKTAHRLLITGTPLQ-------NNLHELWALLNFLLPDVFSSSDQFDDWFNLEIDDAEQKQRLITQLHKILRPFMLRRLKADVEKSLPKKTETLVFCEMMPTQRDTYKKILERDLSVIAGSETAGRTAVLNLVMQLRKACNHPYLFTGVEDRTLDPLGDHVIKNCGKMYLLDKLLKKLKEKGHRVLVFCQMTRMLDILEDFMYMRG 615
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Match: A0A835Z8T6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T6_9STRA) HSP 1 Score: 502 bits (1292), Expect = 3.510e-166 Identity = 250/360 (69.44%), Postives = 288/360 (80.00%), Query Frame = 1
Query: 763 LRSYQLEGLNWMINLQAQGTNGILADEMGLGKTLQSISILAYMRDFRKVDGPHIILLPKSVLGNWELEFKRFCPSVKVLRLSGTKEERATIIRDEVRPGGLEEERRWDVLLTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQARAPSLPNNLHELWALLNFLLPSVFKDSEAFSKVFDLNVDDADKKQNMITQLHKILRPFMLRRLKKDVEKSLPPKEETILFTGMSEMQRRVYKGVLMRDIDTVNGSNAG--RTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMVLLDKLLKRLKELGHRVLVFSQMTRQIDILEDLMHMRG 1836
+R+YQLEGLNWMINLQ QG NG+LADEMGLGKTLQSISILAYM DFR + GPH++LLPKS LGNW EF FCP+++VL L G + ER +I +RPG +EER WDV LTTYEVA +E SL KIGWRYLIIDEAH+LKNE+S S T R + +RLLLTGTPLQ NNLHELWALLN LLP VF D+ FS+ F+L+ D D K+ +ITQLHKILRPFMLRRLK D K LPPK ETIL+T +S+MQRR+Y+ +LMR+ID VN + AG RTA+LNIVMQLRKCCNHPYLFP EDR+LDP+GEHLV+ CGK+ LLDKLL RLKE GHRVLVFSQMTR +DILEDLMHMRG
Sbjct: 1 MRAYQLEGLNWMINLQTQGINGVLADEMGLGKTLQSISILAYMCDFRGISGPHLVLLPKSTLGNWRGEFATFCPALRVLPLHGDRAEREALIEQRLRPGVPQEERDWDVCLTTYEVARMEVKSLEKIGWRYLIIDEAHKLKNENSQVSGTARAMNADHRLLLTGTPLQ-------NNLHELWALLNILLPDVFADASQFSEFFNLDTGDTDAKKTVITQLHKILRPFMLRRLKSDAAKELPPKTETILYTRLSDMQRRLYRDLLMRNIDCVNSTGAGIQRTALLNIVMQLRKCCNHPYLFPGMEDRSLDPLGEHLVDACGKVKLLDKLLSRLKERGHRVLVFSQMTRMLDILEDLMHMRG 353
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI) HSP 1 Score: 520 bits (1340), Expect = 1.010e-165 Identity = 322/633 (50.87%), Postives = 399/633 (63.03%), Query Frame = 1
Query: 1 IKSAGTAYSYFMSEQYREHKDEFAGLG----FGHAGAEISRRWNAL--DETGKVKFEELATKDRARYHRECRTRDEEVAARQAASREARFAEPVSQSYMRERAA---PEPRRERRVTREEDMSEEQLEARRMLKEKREKQKAARLAGEAESSRQKETIAAAAAAMARKRIKYILRQSDIFATHFGVAVSEXXXXXXXXXXXXXXGADGATSNGAAAAGGSPSKRRGRPSGREGEDSTEADANSGEEA-------AP--TYLVQQPPSISGGTLRSYQLEGLNWMINLQAQGTNGILADEMGLGKTLQSISILAYMRDFRKVDGPHIILLPKSVLGNWELEFKRFCPSVKVLRLSGTKEERATIIRDEVRPGGLEEERRWDVLLTTYEVANIEKTSLNKIGWRYLIIDEAHRLKNESSLFSMTVRELTTQYRLLLTGTPLQARAPSLPNNLHELWALLNFLLPSVFKDSEAFSKVFDLNVDDADKKQNMITQLHKILRPFMLRRLKKDVEKSLPPKEETILFTGMSEMQRRVYKGVLMRDIDTVNGS----NAGRTAILNIVMQLRKCCNHPYLFPNTEDRNLDPMGEHLVENCGKMVLLDKLLKRLKELGHRVLVFSQMTRQIDILEDLMHMR 1833
IK+A +AY +M E++ E K G FG E+S RW L D+ +VKFE LA +DRAR+ RE +D EVA Q A R R + ++S MR R P+P+ + + +SEE+ R+ ++ + K+KA R A + Q +I A A R++++L+QSDIF HFGV GA A + SP KRR RE AP T+L +QP I G +R YQLEGLNWMI L G NGILADEMGLGKTLQSIS+LAYM +++ + GPHIIL+PKS L NW E KR+CP+++ LR GT+EERA++I + +R G +R WDV AN+EK SL I WRYLIIDEAHRLKNE+S+FS TVR Q+RLLLTGTPLQ NNLHELWALLNFLLP VF SE F + F+L +DD + K+N+I QLHKILRPFMLRRLK DVEKSLPPK ETIL+ G+S Q+ VY+ VL+RDID VNG+ NAGRT ILNIVMQLRKCCNHPYLF EDR LDP+G+HL+ NCGKMVLLDKLLK+L + GHRVL+F+QMT+ +DI ED MR
Sbjct: 4 IKAAASAYHLYMKEKHAEVKASLEAKGQTADFGDVMRELSSRWKELGSDDADRVKFETLAAEDRARFERESAAKDLEVAEAQRAKRAERESL-TTESRMRGRPKSEQPKPKA-KAMGPPRQLSEEEKARRQERQDLKNKEKAERNARTQIAEAQHTSIKDEIAKQASARLQFLLKQSDIFQ-HFGVGKQATQAGEAKQEK----GAASAEAKAGEVT--SPGKRR-----REAXXXXXXXXXXXXXXXXXXXXXAPETTFLTKQPDCIKFGKMRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALRPLRFHGTREERASLIEERLRVG--HNDRDWDV-----GGANLEKRSLQNIAWRYLIIDEAHRLKNEASMFSQTVRSFNMQHRLLLTGTPLQ-------NNLHELWALLNFLLPDVFSSSEQFDQWFNLEIDDKEAKENIIHQLHKILRPFMLRRLKADVEKSLPPKTETILYVGLSSKQKEVYRNVLLRDIDMVNGTGGGGNAGRTVILNIVMQLRKCCNHPYLFAGVEDRKLDPLGDHLIINCGKMVLLDKLLKKLFDKGHRVLIFTQMTKMLDIFEDFCVMR 608 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6401.14208.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6401.14208.1 >prot_H-paniculata_contig6401.14208.1 ID=prot_H-paniculata_contig6401.14208.1|Name=mRNA_H-paniculata_contig6401.14208.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=614bp IKSAGTAYSYFMSEQYREHKDEFAGLGFGHAGAEISRRWNALDETGKVKFback to top mRNA from alignment at H-paniculata_contig6401:78..10726- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6401.14208.1 ID=mRNA_H-paniculata_contig6401.14208.1|Name=mRNA_H-paniculata_contig6401.14208.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10649bp|location=Sequence derived from alignment at H-paniculata_contig6401:78..10726- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6401:78..10726- >mRNA_H-paniculata_contig6401.14208.1 ID=mRNA_H-paniculata_contig6401.14208.1|Name=mRNA_H-paniculata_contig6401.14208.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3684bp|location=Sequence derived from alignment at H-paniculata_contig6401:78..10726- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |