mRNA_H-paniculata_contig6398.14201.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Match: D7G070_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G070_ECTSI) HSP 1 Score: 202 bits (514), Expect = 4.910e-59 Identity = 93/117 (79.49%), Postives = 110/117 (94.02%), Query Frame = 1
Query: 535 DFKPQRKAVSTNPDEVSDLIRKQIESNNVMLYMKGTPSEPQCGFSAQVVRILHTQGVSFSSVNVLDYPPIREGIKSFSEWPTIPQVFVKGEFVGGCDIMSQMHESGELETMLKKAEL 885
DFKP+RKAV DEVSDLI+KQ+ESN VMLYMKGTP++PQCGFS QVV ILH+QGVSFSSVNVLDYPP+REGIK+FSEWPTIPQ++VKGEFVGGCDI++Q+H+SG+LETMLK+A+L
Sbjct: 88 DFKPKRKAVPEGADEVSDLIKKQVESNPVMLYMKGTPAQPQCGFSKQVVSILHSQGVSFSSVNVLDYPPLREGIKTFSEWPTIPQLYVKGEFVGGCDILTQLHQSGDLETMLKEAKL 204
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Match: A0A835Z0J8_9STRA (Monothiol glutaredoxin-5, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J8_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.860e-51 Identity = 83/120 (69.17%), Postives = 99/120 (82.50%), Query Frame = 1
Query: 535 DFKPQRKAVSTNPDEVSDLIRKQIESNNVMLYMKGTPSEPQCGFSAQVVRILHTQGVSFSSVNVLDYPPIREGIKSFSEWPTIPQVFVKGEFVGGCDIMSQMHESGELETMLKKAELV*G 894
DFKP+RK V E+ D+I +Q+ N +M+YMKGTPS P CGFS QVVRILH QGV FSS+N+LDYP IREG+K FS+WPTIPQV++ GEFVGGCDIM+QMH+SGELETMLK+A LV G
Sbjct: 67 DFKPKRKEVPEGDAEIHDMIAQQVRDNKLMVYMKGTPSAPACGFSMQVVRILHAQGVDFSSINILDYPAIREGVKKFSDWPTIPQVYLNGEFVGGCDIMTQMHKSGELETMLKEAGLVQG 186
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Match: A0A1V9YG11_9STRA (Monothiol glutaredoxin-5, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG11_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.260e-45 Identity = 82/140 (58.57%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 457 SRALFCSASRRWFSTXXXXXXXXXXXDFKPQ-RKAVSTNPDEVSDLIRKQIESNNVMLYMKGTPSEPQCGFSAQVVRILHTQGVSFSSVNVLDYPPIREGIKSFSEWPTIPQVFVKGEFVGGCDIMSQMHESGELETMLK 873
+RAL + S R+FS DFKP+ A S PD+V LI+ +++ +MLYMKGTPS PQCGFS QVV+ILH QG+SF SVNVLD+P IREG+K FS+WPTIPQ+FVKGEFVGGCDI++ MH+SGEL +L+
Sbjct: 13 ARALRMTTSVRFFSESHD--------DFKPKYHAAASAEPDDVLKLIQSHVDTYPIMLYMKGTPSSPQCGFSRQVVQILHAQGISFDSVNVLDHPEIREGVKEFSQWPTIPQLFVKGEFVGGCDIITDMHKSGELAELLE 144
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Match: A0A6G0XHZ8_9STRA (Glutaredoxin domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHZ8_9STRA) HSP 1 Score: 164 bits (415), Expect = 3.280e-45 Identity = 76/115 (66.09%), Postives = 95/115 (82.61%), Query Frame = 1
Query: 535 DFKPQRKAV-STNPDEVSDLIRKQIESNNVMLYMKGTPSEPQCGFSAQVVRILHTQGVSFSSVNVLDYPPIREGIKSFSEWPTIPQVFVKGEFVGGCDIMSQMHESGELETMLKK 876
DFKP+ A S++ D+V LI+ +E+ +MLYMKGTPS PQCGFS QVV+ILH QGVSF SVNVLD+P IREG+K FS+WPTIPQ+FVKGEF+GGCDI++ MH+SGELE + K+
Sbjct: 31 DFKPKYHAAPSSDKDDVLKLIKSHVETYPIMLYMKGTPSSPQCGFSRQVVQILHAQGVSFDSVNVLDHPEIREGVKEFSQWPTIPQLFVKGEFIGGCDIVTDMHKSGELEDLFKQ 145
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Match: A0A7R9UER6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UER6_9STRA) HSP 1 Score: 165 bits (417), Expect = 5.780e-45 Identity = 75/115 (65.22%), Postives = 94/115 (81.74%), Query Frame = 1
Query: 535 DFKPQRKAVSTNPDEVSDLIRKQIESNNVMLYMKGTPSEPQCGFSAQVVRILHTQGVSFSSVNVLDYPPIREGIKSFSEWPTIPQVFVKGEFVGGCDIMSQMHESGELETMLKKA 879
DF PQRK V+ N +E+ LI+KQ N VMLYMKGTP++PQCGFSAQV +I+ QGV F+SVNVLDYP +RE IK +S WPTIPQ++V GEF+GGCDI++QMH+SGELE + K+A
Sbjct: 71 DFAPQRKVVADNVEEMMALIKKQTTENKVMLYMKGTPNQPQCGFSAQVSKIMAVQGVDFASVNVLDYPLLRECIKEYSSWPTIPQLYVNGEFIGGCDIVTQMHQSGELEELFKEA 185
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Match: A0A067BUX8_SAPPC (Glutaredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BUX8_SAPPC) HSP 1 Score: 163 bits (413), Expect = 6.230e-45 Identity = 82/140 (58.57%), Postives = 101/140 (72.14%), Query Frame = 1
Query: 457 SRALFCSASRRWFSTXXXXXXXXXXXDFKPQ-RKAVSTNPDEVSDLIRKQIESNNVMLYMKGTPSEPQCGFSAQVVRILHTQGVSFSSVNVLDYPPIREGIKSFSEWPTIPQVFVKGEFVGGCDIMSQMHESGELETMLK 873
+RAL +A R FS DFKP+ A S PD+V LI+ + + +MLYMKGTP+ PQCGFS QVV+I+H QGVSF SVNVLD+P IREG+K FS+WPTIPQ+FV GEFVGGCDI++ MH+SGELE +LK
Sbjct: 13 ARALRMAAPARLFSDTHD--------DFKPKYHAAASAEPDDVLKLIQSHVSTYPIMLYMKGTPTSPQCGFSRQVVQIMHAQGVSFDSVNVLDHPEIREGVKEFSQWPTIPQLFVNGEFVGGCDIITDMHKSGELEDLLK 144
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Match: A0A1V9ZY72_9STRA (Monothiol glutaredoxin-5, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY72_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.420e-44 Identity = 75/114 (65.79%), Postives = 93/114 (81.58%), Query Frame = 1
Query: 535 DFKPQ-RKAVSTNPDEVSDLIRKQIESNNVMLYMKGTPSEPQCGFSAQVVRILHTQGVSFSSVNVLDYPPIREGIKSFSEWPTIPQVFVKGEFVGGCDIMSQMHESGELETMLK 873
DFKP+ A S D+V LI+ +++ +MLYMKGTP++PQCGFS QVV+ILH QG+SF SVNVLD+P IREG+K FS+WPTIPQ+FV GEFVGGCDI+S MH+SGELE +LK
Sbjct: 25 DFKPKYHAAASAERDDVIKLIQSHVDTYPIMLYMKGTPTQPQCGFSRQVVQILHAQGISFDSVNVLDHPEIREGVKEFSQWPTIPQLFVNGEFVGGCDIVSDMHKSGELEELLK 138
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Match: A0A8K1C606_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C606_PYTOL) HSP 1 Score: 161 bits (408), Expect = 5.900e-44 Identity = 75/113 (66.37%), Postives = 92/113 (81.42%), Query Frame = 1
Query: 535 DFKPQ-RKAVSTNPDEVSDLIRKQIESNNVMLYMKGTPSEPQCGFSAQVVRILHTQGVSFSSVNVLDYPPIREGIKSFSEWPTIPQVFVKGEFVGGCDIMSQMHESGELETML 870
DF+P+ AVST DE+ +I +++ +MLYMKGTPS PQCGFS QVVRILH QGVSF SVNVLD+P IREG+K +S+WPTIPQ++VKGEFVGGCDI+S MH+SGEL +L
Sbjct: 48 DFQPKFHAAVSTEKDEILKMIESHVKTYPIMLYMKGTPSAPQCGFSMQVVRILHAQGVSFDSVNVLDHPEIREGVKDYSQWPTIPQLYVKGEFVGGCDIVSDMHKSGELNDLL 160
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Match: A0A7S2KLG0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLG0_9STRA) HSP 1 Score: 161 bits (407), Expect = 6.860e-44 Identity = 73/116 (62.93%), Postives = 92/116 (79.31%), Query Frame = 1
Query: 535 DFKPQRKAVSTNPDEVSDLIRKQIESNNVMLYMKGTPSEPQCGFSAQVVRILHTQGVSFSSVNVLDYPPIREGIKSFSEWPTIPQVFVKGEFVGGCDIMSQMHESGELETMLKKAE 882
DF PQ+KAV T DE ++I+ +ESN +MLYMKG PS PQCGFSA VV +L +G FSSVNV+DYP IREG+K FS+WPTIPQ++V GEF+GGCDI++ MHESGEL+ +L+ E
Sbjct: 44 DFAPQKKAVET--DEALEIIKSHVESNRIMLYMKGNPSAPQCGFSATVVGVLQKEGADFSSVNVMDYPSIREGVKKFSDWPTIPQLYVDGEFIGGCDIVTSMHESGELKDLLQVEE 157
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Match: A0A485KR85_9STRA (Aste57867_10735 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR85_9STRA) HSP 1 Score: 160 bits (406), Expect = 7.030e-44 Identity = 76/114 (66.67%), Postives = 93/114 (81.58%), Query Frame = 1
Query: 535 DFKPQRKAV-STNPDEVSDLIRKQIESNNVMLYMKGTPSEPQCGFSAQVVRILHTQGVSFSSVNVLDYPPIREGIKSFSEWPTIPQVFVKGEFVGGCDIMSQMHESGELETMLK 873
DFKP+ A S++ DE+ LI+ +++ VMLYMKGTPS PQCGFS QVV+ILH QGVSF SVNVLD+ IREG+K FS+WPTIPQ+FVKGEFVGGCDI++ MH+SGELE + K
Sbjct: 31 DFKPKYHAAPSSDKDEILKLIQSHVDTYPVMLYMKGTPSSPQCGFSRQVVQILHAQGVSFDSVNVLDHEEIREGVKEFSQWPTIPQLFVKGEFVGGCDIVTDMHKSGELEELFK 144 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6398.14201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6398.14201.1 >prot_H-paniculata_contig6398.14201.1 ID=prot_H-paniculata_contig6398.14201.1|Name=mRNA_H-paniculata_contig6398.14201.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp MMTTSISAARQGMVVRKFACAASHSVQKSGCARSFGTVTCTRQRHQLPQAback to top mRNA from alignment at H-paniculata_contig6398:3733..9420- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6398.14201.1 ID=mRNA_H-paniculata_contig6398.14201.1|Name=mRNA_H-paniculata_contig6398.14201.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5688bp|location=Sequence derived from alignment at H-paniculata_contig6398:3733..9420- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6398:3733..9420- >mRNA_H-paniculata_contig6398.14201.1 ID=mRNA_H-paniculata_contig6398.14201.1|Name=mRNA_H-paniculata_contig6398.14201.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1278bp|location=Sequence derived from alignment at H-paniculata_contig6398:3733..9420- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |