prot_H-paniculata_contig6397.14200.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6397.14200.1
Unique Nameprot_H-paniculata_contig6397.14200.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length310
Homology
BLAST of mRNA_H-paniculata_contig6397.14200.1 vs. uniprot
Match: D7G459_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G459_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 2.980e-59
Identity = 140/302 (46.36%), Postives = 180/302 (59.60%), Query Frame = 0
Query:    8 MRRYARAHPEVVAEVSPHAVEDTKAQYDTASNSTSGAATAPRKAEADAXXXXESGEKSARRKWSKSEYSSIEFYNWLNTY-HHAKPEEEDQPEKHKDDWEYDEXXXXXGEEKNGTINVGKEFLVQRAKPPGYDVNVFGPEMLANREKVLAARSRAQLRKAHERLRLAELALREQASAYRTVALGWENPVPQRVPVKGPSGGSIKQKTARAGEARGGGTPGATANRVMYGPSETYAYVFHRMMPAYSVLHRVLSEVRHDLPDLNPTAMLDFGSGPGTAALAAWDVWGGDGGNVEDSDREENCE 308
            MRR ARAHPE VA +SP AVED+++ Y         AA+ PR  ++           S  + W+ ++  + EF+ WLNT  H+A    E+  E+         XXXX     +G +N+GK FL+ RAK   YD ++F   ML  R+KVLAARS  QLRKAH+RLR  E AL  +A  YRTV +G+E P P    + G     + Q     G +R  G     ANRV+YGPSET+AYV+HRMMPAY+VLHRV++EV  +LP  NP  MLDFGSGPGT+ALA WDVWG  GG+    D +E  E
Sbjct:    1 MRRLARAHPEAVAAISPSAVEDSRSVY---------AASVPRSKQSQVGN-------SGAKVWTNADLGTPEFFAWLNTVPHNAARHLEEVNEEDXXXXXXXXXXXXGDALGDGPLNMGKAFLIPRAKMSLYDQDIFAHSMLEARDKVLAARSPGQLRKAHDRLRETETALNLRAGNYRTVKVGFEEPAPSAGSMDG-----LSQTEPAHGSSRASGR----ANRVVYGPSETFAYVYHRMMPAYTVLHRVMTEVTSELPGFNPRTMLDFGSGPGTSALAVWDVWGAGGGSSVAQDGKETGE 277          
BLAST of mRNA_H-paniculata_contig6397.14200.1 vs. uniprot
Match: A0A835Z4D0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D0_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 7.150e-14
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 0
Query:  232 VMYGPSETYAYVFHRMMPAYSVLHRVLSEVRHDLPDLNPTAMLDFGSGPGTAALAAWDVWG 292
            V+YGP ETYAYV HRM+PAY++  RVL E R  LP   P + LDFG+GPGTA LAA   WG
Sbjct:   82 VVYGPDETYAYVSHRMLPAYAIARRVLEEARDLLPGFEPKSHLDFGAGPGTAVLAARSAWG 142          
BLAST of mRNA_H-paniculata_contig6397.14200.1 vs. uniprot
Match: A0A4Y7JRX5_PAPSO (Uncharacterized protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JRX5_PAPSO)

HSP 1 Score: 58.9 bits (141), Expect = 4.790e-6
Identity = 29/58 (50.00%), Postives = 34/58 (58.62%), Query Frame = 0
Query:  234 YGPSETYAYVFHRMMPAYSVLHRVLSEVRHDLPDLNPTAMLDFGSGPGTAALAAWDVW 291
            Y   ET AYV  RM   YS  HR+  EVR  LP   PT +LDFGSG G+A  A  ++W
Sbjct:  108 YRDVETLAYVASRMPAVYSACHRIFREVRRRLPGFEPTTVLDFGSGTGSALWALREMW 165          
BLAST of mRNA_H-paniculata_contig6397.14200.1 vs. uniprot
Match: A0A5J4XPP5_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XPP5_9CHLO)

HSP 1 Score: 58.5 bits (140), Expect = 6.270e-6
Identity = 30/58 (51.72%), Postives = 34/58 (58.62%), Query Frame = 0
Query:  234 YGPSETYAYVFHRMMPAYSVLHRVLSEVRHDLPDLNPTAMLDFGSGPGTAALAAWDVW 291
            Y  +   AY   RM   Y+VL RV  E+   LP   P AMLDFGSGPGTA  AA +VW
Sbjct:  191 YDSARVAAYASSRMPACYAVLFRVFDELHLHLPHFAPRAMLDFGSGPGTAVWAAREVW 248          
BLAST of mRNA_H-paniculata_contig6397.14200.1 vs. uniprot
Match: A0A2P6TFL4_CHLSO (Methyltransferase mitochondrial n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TFL4_CHLSO)

HSP 1 Score: 55.8 bits (133), Expect = 5.530e-5
Identity = 29/59 (49.15%), Postives = 33/59 (55.93%), Query Frame = 0
Query:  233 MYGPSETYAYVFHRMMPAYSVLHRVLSEVRHDLPDLNPTAMLDFGSGPGTAALAAWDVW 291
            +Y      AY   RM   Y+ L RVL EV    P   P++MLDFGSGPGTA  AA  VW
Sbjct:  191 LYDMPAALAYAASRMPACYAALSRVLGEVAGRRPGWQPSSMLDFGSGPGTAVWAAQQVW 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6397.14200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G459_ECTSI2.980e-5946.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z4D0_9STRA7.150e-1462.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4Y7JRX5_PAPSO4.790e-650.00Uncharacterized protein n=3 Tax=Papaver somniferum... [more]
A0A5J4XPP5_9CHLO6.270e-651.72Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A2P6TFL4_CHLSO5.530e-549.15Methyltransferase mitochondrial n=1 Tax=Chlorella ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015324Ribosomal protein Rsm22-likePFAMPF09243Rsm22coord: 238..292
e-value: 4.5E-10
score: 39.3
NoneNo IPR availablePANTHERPTHR21320:SF0METHYLTRANSFERASE-LIKE PROTEIN 17, MITOCHONDRIALcoord: 228..292
NoneNo IPR availablePANTHERPTHR21320CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATEDcoord: 228..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6397contigH-paniculata_contig6397:83..6443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6397.14200.1mRNA_H-paniculata_contig6397.14200.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6397 83..6989 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6397.14200.1 ID=prot_H-paniculata_contig6397.14200.1|Name=mRNA_H-paniculata_contig6397.14200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp
MPKLSNRMRRYARAHPEVVAEVSPHAVEDTKAQYDTASNSTSGAATAPRK
AEADAPKSAESGEKSARRKWSKSEYSSIEFYNWLNTYHHAKPEEEDQPEK
HKDDWEYDEYDGYDGEEKNGTINVGKEFLVQRAKPPGYDVNVFGPEMLAN
REKVLAARSRAQLRKAHERLRLAELALREQASAYRTVALGWENPVPQRVP
VKGPSGGSIKQKTARAGEARGGGTPGATANRVMYGPSETYAYVFHRMMPA
YSVLHRVLSEVRHDLPDLNPTAMLDFGSGPGTAALAAWDVWGGDGGNVED
SDREENCEQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015324Ribosomal_Rsm22-like