prot_H-paniculata_contig638.14187.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig638.14187.1
Unique Nameprot_H-paniculata_contig638.14187.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length531
Homology
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BLAST of mRNA_H-paniculata_contig638.14187.1 vs. uniprot
Match: D7G732_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G732_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 9.980e-141
Identity = 239/470 (50.85%), Postives = 311/470 (66.17%), Query Frame = 0 
Query:    1 GASGATCDSQDVTDPTSRRDSTGWVSEDL--GAGERRQGHISGRVVAWDMDVLVVYGGTGLRNDDVNDVLATSSNLSV--FTNADEISQSWTQQLEMISYGLSPPALFRPGAFVWNNSLFIVGGHTDTSYEVTSEIWRADIQAFKEAPEGMWRPVDWTIANDSVDNSAPTAMYGLTATVLATDDEDPQEVWVAVLGGMTAYQESVDENYILHVTDTGEYFSCD-DSTLPASSTYSCAYRTHTRRVTQTRCETPTDSQGEWWSLSEKLAPGTSSGPTQRSYHAAVSISSDGHGNSSCLYMFAGRNYEGGALYSDLWRLCPVGGYLGTSANTTFWWSELTPAGNSPQARYGHTFTSGLEDGQYRLLLYAGSGRYPNSYLDDDFTHEYDAHMNAWIDTSLANGSAFTPGERRDHVLEGVGDFMYLVAGIDADE-ALMDMWSANFSRS-CPGGFTLNGSSSASADGCVECSAGT 463
            G   A CD + VTDP S RD TGW S+D   GAG+RRQGH+S  V AWD    VV+GGT +R DDVNDV+   + + V   TN      +WT+ LEM++Y  +P A+FRP +FVW+NSLF+V GHT+  + VT+EIWRADIQ F+EAPEG+WRP++ +  +           YG TATVL T + +P E W  V+GGMT  Q SVD N ILH++++ + F CD D+ +  +S+Y+C  RT TR         PT+++GEW  L  +L+    S P  RSYHA  S++S+G G S+CLYM+ GRNYE   LYSDLW LCPV  YLG S +TTF W+EL+PAG  P  RYG  F +G++D  +R+LLY G+GRYPNSY+ D+FT EYD +MNAW+D+SL +GS+  P  RRDH LEGVGDF+ L+AGI+ DE AL DMW+ NFS   C  G  +    S S+  C  C  GT
Sbjct:   22 GIDAAVCDGETVTDPVSLRDPTGWDSQDSIGGAGQRRQGHVSAEVTAWDQKHAVVFGGTSVRTDDVNDVVGREAGVFVVDITNP----ANWTE-LEMVAYDGAPHAVFRPASFVWDNSLFVVCGHTEEPFTVTTEIWRADIQGFEEAPEGLWRPINASKTDALGGQVYDIPRYGHTATVLNTGEANPTEAWAIVIGGMTGSQNSVDTNLILHLSESSDEFVCDEDALVNITSSYTCGQRTPTR---------PTETEGEWLYLDSRLS--NDSKPASRSYHAVASLASNGLGGSACLYMYGGRNYEMSILYSDLWSLCPVSNYLGNSEDTTFTWTELSPAGTLPLGRYGAVFVAGIKDAPHRILLYGGTGRYPNSYMADEFTKEYDTYMNAWVDSSLEDGSSTYPVGRRDHTLEGVGDFLVLIAGINNDEEALQDMWNVNFSSPMCSSGNYMFFCESTSSPVCGVCPDGT 475
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig638.14187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G732_ECTSI9.980e-14150.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 462..506
e-value: 3.0E-7
score: 40.1
NoneNo IPR availablePFAMPF13854Kelch_5coord: 270..313
e-value: 7.4E-5
score: 22.6
NoneNo IPR availableGENE3D2.10.50.10coord: 446..504
e-value: 4.1E-6
score: 28.6
NoneNo IPR availablePANTHERPTHR46104:SF1GENE 9195-RELATEDcoord: 313..531
NoneNo IPR availablePANTHERPTHR46104FAMILY NOT NAMEDcoord: 313..531
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 234..438
e-value: 2.1E-5
score: 25.7
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 50..437
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 436..531

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig638contigH-paniculata_contig638:22905..28308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig638.14187.1mRNA_H-paniculata_contig638.14187.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig638 22905..28309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig638.14187.1 ID=prot_H-paniculata_contig638.14187.1|Name=mRNA_H-paniculata_contig638.14187.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=531bp
GASGATCDSQDVTDPTSRRDSTGWVSEDLGAGERRQGHISGRVVAWDMDV
LVVYGGTGLRNDDVNDVLATSSNLSVFTNADEISQSWTQQLEMISYGLSP
PALFRPGAFVWNNSLFIVGGHTDTSYEVTSEIWRADIQAFKEAPEGMWRP
VDWTIANDSVDNSAPTAMYGLTATVLATDDEDPQEVWVAVLGGMTAYQES
VDENYILHVTDTGEYFSCDDSTLPASSTYSCAYRTHTRRVTQTRCETPTD
SQGEWWSLSEKLAPGTSSGPTQRSYHAAVSISSDGHGNSSCLYMFAGRNY
EGGALYSDLWRLCPVGGYLGTSANTTFWWSELTPAGNSPQARYGHTFTSG
LEDGQYRLLLYAGSGRYPNSYLDDDFTHEYDAHMNAWIDTSLANGSAFTP
GERRDHVLEGVGDFMYLVAGIDADEALMDMWSANFSRSCPGGFTLNGSSS
ASADGCVECSAGTYSVDGDLECSLCPSGFYSEEGWSSCSPCSAGYSRLSS
SSSSDCYPCAVGTYAPFAQASTCLDCPRGFY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR015915Kelch-typ_b-propeller
IPR009030Growth_fac_rcpt_cys_sf