mRNA_H-paniculata_contig638.14182.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 169 bits (427), Expect = 4.940e-48 Identity = 81/137 (59.12%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 10 VSQVLASLQILGRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHEWI*LPTGDALADTMKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDHSRRVLGMTKGMTGAVNDKSIIRRD 420
+ QVL +LQILGRGN FDDI QLSLMS+ A + FH FCK FA++LF E I LPTG + M +D +G TGA+GSTDVTHI WG P + YTGKEGFPT+AY+ TVDH+ R + +T G TGA NDK+I+R D
Sbjct: 1 MQQVLTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIMRYD 137
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 170 bits (431), Expect = 7.900e-47 Identity = 82/139 (58.99%), Postives = 101/139 (72.66%), Query Frame = 1
Query: 4 AAVSQVLASLQILGRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHEWI*LPTGDALADTMKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDHSRRVLGMTKGMTGAVNDKSIIRRD 420
AA +++L +LQILGRGN FDDI QLSLMS+ A + FH FCK FA++LF E I LPTG + M +D +G TGA+GSTDVTHI WG P + YTGKEGFPT+AY+ TVDH+ R + +T G TGA NDK+IIR D
Sbjct: 246 AASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYD 384
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 167 bits (422), Expect = 6.580e-46 Identity = 80/138 (57.97%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 13 SQVLASLQILGRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHEWI*LPTGDALADTMKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDHSRRVLGMTKGMTGAVNDKSIIRRDKS 426
+QVLA LQIL RGN F DI +S +S T S FH FCK FA +L+ E++ LPTG+ L M+ +D +GF GAVGSTDVTHI WG P + + +YTGKEG PT+A++ TVDHS RVL +T+G TGA NDK+IIR DK+
Sbjct: 82 TQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKA 219
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 165 bits (417), Expect = 2.050e-44 Identity = 79/137 (57.66%), Postives = 100/137 (72.99%), Query Frame = 1
Query: 16 QVLASLQILGRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHEWI*LPTGDALADTMKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDHSRRVLGMTKGMTGAVNDKSIIRRDKS 426
+VLA LQIL RGN F DI +S +S T S FH FCK FA +L+ E++ LPTG+ L M+ +D +GF GAVGSTDVTHI WG P + + +YTGKEG PT+A++ TVDHS RVL +T+G TGA NDK+IIR DK+
Sbjct: 174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKA 310
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Match: A0A6H5K6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N4_9PHAE) HSP 1 Score: 150 bits (379), Expect = 6.160e-42 Identity = 73/136 (53.68%), Postives = 91/136 (66.91%), Query Frame = 1
Query: 10 VSQVLASLQILGRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHEWI*LPTGDALADTMKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDHSRRVLGMTKGMTGAVNDKSIIRR 417
+ QVL +LQ LGRGN FDDI QLSLMS+ A + FH FCK FA++LF E I LPTG + M +D +G TGA+GSTDVTHI WG P + YTGKEGFPT+AY+ TVDH+ R + +T G+ D +R
Sbjct: 1 MQQVLTTLQTLGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGVHTIKTDAQYTKR 136
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 155 bits (393), Expect = 4.850e-41 Identity = 75/135 (55.56%), Postives = 95/135 (70.37%), Query Frame = 1
Query: 16 QVLASLQILGRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHEWI*LPTGDALADTMKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDHSRRVLGMTKGMTGAVNDKSIIRRD 420
+VLA LQIL RGN F DI +S +S TA + FH F + FA +++ E I LPTGD M +D +GF+GA GSTDVTHI WG P + + YTGKEG+PT+AY+ TVDH++RVL +T G TG+ NDKSIIR D
Sbjct: 158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYD 292
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 152 bits (384), Expect = 1.170e-40 Identity = 84/168 (50.00%), Postives = 102/168 (60.71%), Query Frame = 1
Query: 34 QILGRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHEWI*LPTGDALADTMKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDHSRRVLGMTKGMTGAVNDKSIIRRDKSYEPGVLISDTVDQ------TLHKNNV---YRHYCFLV 510
Q+LG+GN FDD+ QLS MS+S AQ FH FC+ FA ++F E I LPTG L + M +G+TGA GSTDVTHI W P + +TGKEGFPT+AY+ TVDH R L +T G TGA NDK+IIR Y+ GV T Q L K N R CFL+
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIR----YDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLI 205
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 152 bits (385), Expect = 3.320e-40 Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 1
Query: 16 QVLASLQILGRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHEWI*LPTGDA--LADTMKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDHSRRVLGMTKGMTGAVNDKSIIRRDKSYE 432
+VLA L ILGRGN F I Q+S MS T Q FH FC+ FA +++ E I LPT ++ L MK +D +GFTGAVGS DVTHI W R P + + YTGKEGFPT+AY+ TVDH+ R + +T+G TG+ NDK+I+ D + E
Sbjct: 85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVE 225
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 147 bits (370), Expect = 4.030e-38 Identity = 68/137 (49.64%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 16 QVLASLQILGRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHEWI*LPTGDALADTMKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDHSRRVLGMTKGMTGAVNDKSIIRRDKS 426
+VL LQ+LGRGN F D+ QLSLMS TA+ +FH FC F+ L+H+W+ LP G+ L + +G GAV S D THI+W P S ++ + GKEG+ TL YEA+ DHS R+L TKG GA NDK++++RD S
Sbjct: 112 KVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLS 248
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Match: A0A6H5JIW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW4_9PHAE) HSP 1 Score: 141 bits (355), Expect = 1.890e-37 Identity = 69/129 (53.49%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 34 QILGRGNSFDDIGQLSLMSESTAQSAFHTFCKRFAEDLFHEWI*LPTGDALADTMKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDHSRRVLGMTKGMTGAVNDKSIIRRD 420
++LG+G FDD+ QLS MS+S AQ+ FH F + FA ++F E I LPTG L + M +G TGA GSTDVTHI W P + +TGKEGFPT+AYE TVDH+ R L + G TGA NDK+ IR D
Sbjct: 3 RVLGKGTCFDDVEQLSKMSKSMAQATFHKFRRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGWNMCPFTLGRPFTGKEGFPTIAYEVTVDHAGRTLAVANGFTGATNDKTTIRYD 131 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig638.14182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig638.14182.1 >prot_H-paniculata_contig638.14182.1 ID=prot_H-paniculata_contig638.14182.1|Name=mRNA_H-paniculata_contig638.14182.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=128bp MKAHDAVGFTGAVGSTDVTHITWGRTPVSHSHLYTGKEGFPTLAYEATVDback to top mRNA from alignment at H-paniculata_contig638:2845..4211+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig638.14182.1 ID=mRNA_H-paniculata_contig638.14182.1|Name=mRNA_H-paniculata_contig638.14182.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1367bp|location=Sequence derived from alignment at H-paniculata_contig638:2845..4211+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig638:2845..4211+ >mRNA_H-paniculata_contig638.14182.1 ID=mRNA_H-paniculata_contig638.14182.1|Name=mRNA_H-paniculata_contig638.14182.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=768bp|location=Sequence derived from alignment at H-paniculata_contig638:2845..4211+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |