prot_H-paniculata_contig6377.14176.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6377.14176.1
Unique Nameprot_H-paniculata_contig6377.14176.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1285
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6377.14176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 370..400
NoneNo IPR availablePFAMPF14555UBA_4coord: 221..258
e-value: 1.0E-7
score: 31.6
NoneNo IPR availableGENE3D1.10.8.10coord: 217..260
e-value: 4.3E-5
score: 25.5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..1285
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6377contigH-paniculata_contig6377:359..7955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6377.14176.1mRNA_H-paniculata_contig6377.14176.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6377 347..7955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6377.14176.1 ID=prot_H-paniculata_contig6377.14176.1|Name=mRNA_H-paniculata_contig6377.14176.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1285bp
MRCASCLAPLCGLCGPCSRAKQDRRDDDAIPCEARRCDWVEYDRRIKKVT
AAVNNTRAAQLAIQRELSRGHKLSAKPAHAGSASSGGSTSSAAVEQTGGN
DNVMSMLFSSSPSSAHVLPKREKTGVVSAAAATATSEEVYDGMVDLCNDE
STEDGTCSSSSTKGKKNAAPVGRKSPSFEQRSSEPPSQVLSTFMDDDRQG
LGGRGSSSSAQPAEMEAEEPEESIAMFQALTDCKDRERALFFLRGAGGDL
SIAVNHFLTAIEQAGSTSKPSTPTPAVAVPPPTTTMTGTGAARATTLEQR
SEELFEEMYGERFEGRPDTVSTSSDVDVPSKSGGACEGGSLAETTKHVSG
GMSRQEVEEWNRREREEYKRQQQMLLLEKIQQKKKRKQEQQQQQREQKQG
AASVATATPLPSSSPSLVPPAPTQSQLTPLLTTHGNANPTPPCSIAASMA
VPAAAGASLRVKGVLDPPLLVSASAVSDTRGRSTSNKTLAGVRAGGATAM
DIANPAVSTATHDCTFPTANSAVSAAAFTTALLSALSGEPIKIPPPDSLV
TEATATGTYTEQQLRNVELTNSRENLEGGDTKVPGASLPSIFLLPPAPPL
ALDPRAIGPGIDATGPEEVRQLQASTSGPSITASTASSPSTSQEAKNPQA
SAPGPCSPPSAATAESSSSDEEVLSSSRTSGPASSHSPSTAAVHPLTTSQ
EGNDNINSNDHCCQPQPHPSTLTTSVGKSGAPEPSPFTAAATTETATAAA
VVAGAIVPTLTQGVPPEPSLSLQLQSMPASAAVSSIANGGETCLPTAITA
TKESSEYVAAVAAVAAATGNRDSDVATTLPIAEMLAKAGLCDPTSTRAEG
AAALSGASLDVESVSCDGGGGGDSGKGEGDQGSADNHAMNDGSDQVHALK
GSPSSSPSRRPANHAGILDTAGIKSSETRPQENLAVQGRDNTVDSDAGRP
NEAASTFSQGMNPGSGIVATGGDVSEVTTTSDGAVGVPHQIIPPPQTLGG
DARLQESPPSAKVTNTTEDGDAGSPLRTSSSPERNTTKKDEESDSPLTTT
SVLGGNDSSPGESHVALMDTDVEGPAVLPESVAGTSLHVEGPAVPLESVA
STEMDVEDPALRSGPRLGGEGELGPVEVTSAADPMAESMKVGVVEGARGS
PQKAATSTVEPVAKSVTVGVIEGNGGSPKVGAVPAVDQTAKPVTVGVIEG
DGGSPQKAAVPAVDAGAKPVTVGVIEGDGDSPKVGAVPAVDQTAKPVTVG
VIEGDGGSPQEAATSTVDQTAKPVTVGVIEGDGGS
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