prot_H-paniculata_contig63718.14173.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig63718.14173.1
Unique Nameprot_H-paniculata_contig63718.14173.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length66
Homology
BLAST of mRNA_H-paniculata_contig63718.14173.1 vs. uniprot
Match: D8LCE5_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE5_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 7.940e-18
Identity = 43/56 (76.79%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    1 SLSALFRRVVSVCQSQFLVIDQVFPRPLVAKVTRSLLQRILNDPVYGVQVWGINVL 56
            SLS LFRRVV+VCQ+QF VI QVFP PLVAKVTR LL RILNDPVYGVQ     VL
Sbjct:   10 SLSGLFRRVVTVCQNQFAVIGQVFPPPLVAKVTRLLLSRILNDPVYGVQARVEQVL 65          
BLAST of mRNA_H-paniculata_contig63718.14173.1 vs. uniprot
Match: A0A7S3M6A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6A5_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.390e-9
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    2 LSALFRRVVSVCQSQFLVIDQVFPRPLVAKVTRSLLQRILNDPVYGVQVWGINVLIC 58
            LS LF  + +VCQ QF +I  VFP   +AKVTR L+QRI NDP +G+Q   ++ ++C
Sbjct:  110 LSGLFSMINTVCQEQFSIIRAVFPAHTIAKVTRMLIQRIFNDPAFGIQA-RVDAILC 165          
BLAST of mRNA_H-paniculata_contig63718.14173.1 vs. uniprot
Match: W7U8I8_9STRA (Exocyst complex n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8I8_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.120e-6
Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 SLSALFRRVVSVCQSQFLVIDQVFPRPLVAKVTRSLLQRILNDPVYGVQVWGINVL 56
            +LS  F  V S+CQ  F +I +VFP   + KVTR L++R+++DPV+G+QV   +VL
Sbjct:  356 ALSEFFGLVSSLCQEAFTLIRRVFPPTSLLKVTRMLIERMISDPVFGIQVRLADVL 411          
BLAST of mRNA_H-paniculata_contig63718.14173.1 vs. uniprot
Match: A0A329RM98_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RM98_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.040e-5
Identity = 20/47 (42.55%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    2 LSALFRRVVSVCQSQFLVIDQVFPRPLVAKVTRSLLQRILNDPVYGV 48
            L ALF +++++C  QF VID VFP  + A +   L++R+ NDP +G+
Sbjct:  310 LDALFTKILAICTEQFPVIDSVFPAAVCASIRELLVERLFNDPAFGI 356          
BLAST of mRNA_H-paniculata_contig63718.14173.1 vs. uniprot
Match: D0NWJ2_PHYIT (Uncharacterized protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NWJ2_PHYIT)

HSP 1 Score: 49.3 bits (116), Expect = 3.800e-5
Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0
Query:    2 LSALFRRVVSVCQSQFLVIDQVFPRPLVAKVTRSLLQRILNDPVYGV 48
            L ALF +++++C  QF VID VFP    A +   L++R+ NDP +GV
Sbjct:  261 LDALFSKILTICTDQFPVIDSVFPAVACASIRELLVERLFNDPAFGV 307          
BLAST of mRNA_H-paniculata_contig63718.14173.1 vs. uniprot
Match: A0A225WTG1_9STRA (Exocyst complex component n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WTG1_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 9.760e-5
Identity = 20/47 (42.55%), Postives = 30/47 (63.83%), Query Frame = 0
Query:    2 LSALFRRVVSVCQSQFLVIDQVFPRPLVAKVTRSLLQRILNDPVYGV 48
            L ALF ++VS+C  QF V+D VFP      +   L++R+ NDP +G+
Sbjct:  264 LDALFTKIVSICTEQFPVVDNVFPAFTCNSIRELLMERLFNDPAFGI 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig63718.14173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LCE5_ECTSI7.940e-1876.79Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S3M6A5_9STRA4.390e-949.12Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
W7U8I8_9STRA3.120e-646.43Exocyst complex n=2 Tax=Monodopsidaceae TaxID=4250... [more]
A0A329RM98_9STRA2.040e-542.55Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
D0NWJ2_PHYIT3.800e-544.68Uncharacterized protein n=3 Tax=Phytophthora infes... [more]
A0A225WTG1_9STRA9.760e-542.55Exocyst complex component n=1 Tax=Phytophthora meg... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig63718contigH-paniculata_contig63718:502..699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig63718.14173.1mRNA_H-paniculata_contig63718.14173.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig63718 502..699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig63718.14173.1 ID=prot_H-paniculata_contig63718.14173.1|Name=mRNA_H-paniculata_contig63718.14173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp
SLSALFRRVVSVCQSQFLVIDQVFPRPLVAKVTRSLLQRILNDPVYGVQV
WGINVLICVELRAWS*
back to top