prot_H-paniculata_contig63613.14164.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig63613.14164.1
Unique Nameprot_H-paniculata_contig63613.14164.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length100
Homology
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Match: A0A6H5K8Z8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z8_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 1.140e-5
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    1 QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNN 35
            QGKYD+AE L+ R++AI+EKVL PEHP +A S NN
Sbjct:   16 QGKYDDAEQLYERSLAIREKVLGPEHPDVAQSLNN 50          
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 1.590e-5
Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNNLGSVLK 41
            QGKY EAE L+ R++AIQEKVL PEHP +A S +N  S+L+
Sbjct:  693 QGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLE 733          
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Match: UPI0013D29528 (tetratricopeptide repeat protein n=1 Tax=Desulfobacter hydrogenophilus TaxID=2291 RepID=UPI0013D29528)

HSP 1 Score: 48.5 bits (114), Expect = 2.110e-5
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    1 QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNNLGSV 39
            QGKY+EAE L+ RA+ I+E VL P+HP++A + NNL  +
Sbjct:    4 QGKYEEAEPLYQRALKIRETVLGPDHPSVATTLNNLAGL 42          
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 3.860e-5
Identity = 24/35 (68.57%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    1 QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNN 35
            QGK+ EAE L+GR+ AIQEKVL PEHP +A S NN
Sbjct:  434 QGKFTEAEPLYGRSQAIQEKVLGPEHPDVATSLNN 468          
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Match: A0A846GGW5_9CYAN (Tetratricopeptide repeat protein n=1 Tax=Okeania sp. SIO2B3 TaxID=2607784 RepID=A0A846GGW5_9CYAN)

HSP 1 Score: 49.7 bits (117), Expect = 5.740e-5
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0
Query:    1 QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNNLGSVLK 41
            QGKYDEAE L  R++AI+EK+L  +HP L  S NNLG + +
Sbjct:  114 QGKYDEAEPLLQRSLAIREKILRDDHPHLEESLNNLGELYR 154          
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 47.0 bits (110), Expect = 6.410e-5
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNNLGSVLKSQ 43
            QGKY EAE L+ R+ AIQEKVL  EHP +A S NN   +L++Q
Sbjct:   18 QGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQ 60          
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Match: D8LPW2_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW2_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 7.330e-5
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNN 35
            QGKYDE + L+ RAI I EK L P+HPALA S NN
Sbjct:   50 QGKYDEGDPLYLRAIEIGEKTLGPDHPALATSLNN 84          
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Match: UPI000AB97D3D (tetratricopeptide repeat-containing protein n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI000AB97D3D)

HSP 1 Score: 49.3 bits (116), Expect = 8.360e-5
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNNLGSVLKS 42
            QGKYD+AE L+ +AI I E+ L P HP+LA S+NNL  + ++
Sbjct:    2 QGKYDDAEPLYLKAIQIYEQSLPPSHPSLATSYNNLAGLYRT 43          
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Match: A0A0J9EWN6_9CYAN (Kinesin (Fragment) n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0J9EWN6_9CYAN)

HSP 1 Score: 49.7 bits (117), Expect = 8.890e-5
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    1 QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNNLGSVLKSQ 43
            QG+Y+EAE L+ R++AI+EKVL   HP +A+S NNL S   SQ
Sbjct:   19 QGRYNEAEPLYQRSLAIREKVLGENHPDVALSLNNLASFYLSQ 61          
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Match: A0A7C7YGX5_9DELT (Tetratricopeptide repeat protein (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C7YGX5_9DELT)

HSP 1 Score: 46.6 bits (109), Expect = 9.280e-5
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    1 QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNN 35
            QG+Y EAE L  R++AI+EK L PEHPA+A S NN
Sbjct:   31 QGRYAEAEPLVKRSLAIKEKALGPEHPAVAQSLNN 65          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig63613.14164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5K8Z8_9PHAE1.140e-565.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G722_ECTSI1.590e-560.98NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
UPI0013D295282.110e-553.85tetratricopeptide repeat protein n=1 Tax=Desulfoba... [more]
A0A6H5LJA6_9PHAE3.860e-568.57NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A846GGW5_9CYAN5.740e-556.10Tetratricopeptide repeat protein n=1 Tax=Okeania s... [more]
A0A6H5K3K8_9PHAE6.410e-558.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPW2_ECTSI7.330e-565.71TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
UPI000AB97D3D8.360e-552.38tetratricopeptide repeat-containing protein n=1 Ta... [more]
A0A0J9EWN6_9CYAN8.890e-555.81Kinesin (Fragment) n=1 Tax=Limnoraphis robusta CS-... [more]
A0A7C7YGX5_9DELT9.280e-562.86Tetratricopeptide repeat protein (Fragment) n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 30..63
e-value: 0.0011
score: 28.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1..21
score: 5.045
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 30..63
score: 8.644
NoneNo IPR availablePFAMPF13424TPR_12coord: 1..61
e-value: 1.5E-17
score: 63.6
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..86
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 1..86
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..98
e-value: 6.3E-33
score: 116.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..85
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..63
score: 12.595

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig63613contigH-paniculata_contig63613:79..681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig63613.14164.1mRNA_H-paniculata_contig63613.14164.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig63613 79..681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig63613.14164.1 ID=prot_H-paniculata_contig63613.14164.1|Name=mRNA_H-paniculata_contig63613.14164.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp
QGKYDEAEALFGRAIAIQEKVLVPEHPALAVSFNNLGSVLKSQGKYDEAE
ALYGRAIAILERVLGREHRDLAASLNNLGGVLQSQVSHVTACMLIGRAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom