mRNA_H-paniculata_contig6331.14124.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6331.14124.1
Unique NamemRNA_H-paniculata_contig6331.14124.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 211 bits (537), Expect = 4.160e-57
Identity = 130/327 (39.76%), Postives = 177/327 (54.13%), Query Frame = 1
Query:    1 EGEDFFETSAPVARMSTLRTVFSLAAKHDFELEGMDVNAA*LNAPLEEKLFVKLSPEFSTFSRDVPLVH--RLCKSLYSLKQGG*NWNSTLDDFLVGIGLQRSTTDPCLYFSRDEAGETDILVAIYVDDLVIAGR-REKVDGFKHNISRCFKMKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECRGVPTPVGGKVKILAPESAKKPP-------NRNHLGLGIVGSLMYASTENRPNIAYAVHQAARRMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLE--GFANTDWVEDVEDRKSTTGYVFQAER 945
            EG D+ E  APVA + ++R + +LAAKHD EL+ MDV  A LN  L E L++ L P+      D+P  H  +L KSLY LKQ G  WN T D  L  +G  R   + CLY  R E G+   LV +YVDDL++A   R  +D  K  ++  FKM+DLG  S VL I++RRDR    I +SQ  YI  VLKRCG ++C+ V TP+  + ++ A +             N+      +VGSLMYA    RP+IAYA     R   +P R  +   KR+   L    DL + F   +    +   G+++ DW  D E  KST+GYVF + R
Sbjct: 1079 EGVDYQEVFAPVANLESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYL-LPPD----GVDIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKRCHWEAAKRVLRYLKGTRDLELQFDGNDVSMDMSFHGYSDADWSGDPETSKSTSGYVFLSSR 1399          
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 207 bits (526), Expect = 4.740e-57
Identity = 121/314 (38.54%), Postives = 183/314 (58.28%), Query Frame = 1
Query:    4 GEDFFETSAPVARMSTLRTVFSLAAKHDFELEGMDVNAA*LNAPLEEKLFVKLSPEFSTFSRDVPLVHRLCKSLYSLKQGG*NWNSTLDDFLVGIGLQRSTTDPCLYFSRDEAGETDILVAIYVDDLVIAGRRE-KVDGFKHNISRCFKMKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECRGVPTPV--GGKVKILAPESAKKPPNRNHLGLGIVGSLMYASTENRPNIAYAVHQAARRMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLEGFANTDWVEDVEDRKSTTGYVFQ 936
            G+D+ ET +PVAR  ++RTV +LAA+H  +L  MDV  A LN  L+E++++K +  F    ++  LV RL +S+Y LKQ    WNS LD  L  +G  ++T DPC+Y  ++E GE   ++A+YVDD+++AG+ + K++  K  ++  F+MKD+G L   L ++V     +  I I Q  Y + VL+R G +  +   TPV  G K+K  A +S +            VG L+Y ST+ RP+IAYAV   AR   DP  E +   KRI   L+   D+G+ +          G+++ DW  D++DRKST+GYVFQ
Sbjct:   59 GDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKE-HLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCA---VGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQ 366          
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Match: UPI001C91A683 (hypothetical protein n=1 Tax=Modestobacter lapidis TaxID=1608613 RepID=UPI001C91A683)

HSP 1 Score: 199 bits (505), Expect = 4.980e-57
Identity = 115/318 (36.16%), Postives = 181/318 (56.92%), Query Frame = 1
Query:    1 EGEDFFETSAPVARMSTLRTVFSLAAKHDFELEGMDVNAA*LNAPLEEKLFVKLSPEFSTFSRDVPLVHRLCKSLYSLKQGG*NWNSTLDDFLVGIGLQRSTTDPCLYFSRDEAGETDILVAIYVDDLVIAGRREK-VDGFKHNISRCFKMKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECRGVPTPVGGKVKILAPESAKKPPNRNHLG----LGIVGSLMYASTENRPNIAYAVHQAARRMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLE--GFANTDWVEDVEDRKSTTGYVF 933
            EG D+ E  +PVA+++++RTV S AA +D E+E MDV  A L+  LEE++++K    F    ++  LV +L KSLY LKQ    W    D +   IG  RS  D C+Y  R+  GE  +++ +YVDD+++ G   K +   K  +++ F+MKDLG+ + +L + +RRDR    + + Q  YI  +LK+    +C+ V TP+   VK+ A +S +    +  +        VGSLMYA    RP+IA AV   +R M +P +E +   KR+F  L    +  + F  K +G+ LE  G  + +W  D+++R+ST+GYVF
Sbjct:   37 EGVDYAEIFSPVAKLTSIRTVLSAAAAYDLEIEQMDVKTAFLHGDLEEEIYMKQPEGFVARGKE-NLVCKLEKSLYGLKQSPRMWYQKFDSYAQQIGFTRSHADHCVYVKRE--GEMFVILTLYVDDMLLIGNSTKMIRTVKDLLAKQFEMKDLGAANFILGMHIRRDRARRRLWLGQERYIEGILKKFNMTDCKPVGTPMSVGVKLSAEQSPQNEEEKEQMASIPYASAVGSLMYAMVCTRPDIAQAVGVLSRYMSNPGKEHWIAVKRVFRYLRGTSNYALCFEGKGDGNTLEFMGSVDANWEGDLDNRRSTSGYVF 351          
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME)

HSP 1 Score: 204 bits (519), Expect = 8.900e-56
Identity = 120/316 (37.97%), Postives = 182/316 (57.59%), Query Frame = 1
Query:    1 EGEDFFETSAPVARMSTLRTVFSLAAKHDFELEGMDVNAA*LNAPLEEKLFVKLSPEFSTFSRDVPLVHRLCKSLYSLKQGG*NWNSTLDDFLVGIGLQRSTTDPCLYFSRDEAGETDILVAIYVDD-LVIAGRREKVDGFKHNISRCFKMKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECRGVPTPVGGKVKI---LAPESAKKPPNRNHLG-LGIVGSLMYASTENRPNIAYAVHQAARRMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLEGFANTDWVEDVEDRKSTTGYVF 933
            +G D+ ET +PV R ++LR +F++AAKHD  +  +D   A LN  L+E++F+K  PE   +S +   V RL KSLY LKQ    WN  L++ L+ +GL RS  D C+YF   E     + VAIYVDD LV +  ++     K+ +S   KMKD+GS S VL + V+RD     I + Q +YI  VLKR G D+C  V TP+    K+   + P+S ++      +  +  VGSL+YA+   RP+I++AV+  +R  ++P +  +   KR+   L    + GI F  + +   L G+ + DW  D++ R+ST+GYVF
Sbjct:  309 QGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMK-QPE--GYSDNSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSEYSM--VYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRFGMDDCNAVATPLDLSQKLTLDMCPKSEEEKKEMEKVPYMEAVGSLLYAAQNTRPDISFAVNLLSRFSQNPGKGHWLALKRVMRYLKGTVNKGIVF--RKSAQSLTGYCDADWAGDLDQRRSTSGYVF 617          
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 199 bits (505), Expect = 2.200e-54
Identity = 118/314 (37.58%), Postives = 180/314 (57.32%), Query Frame = 1
Query:    4 GEDFFETSAPVARMSTLRTVFSLAAKHDFELEGMDVNAA*LNAPLEEKLFVKLSPEFSTFSRDVPLVHRLCKSLYSLKQGG*NWNSTLDDFLVGIGLQRSTTDPCLYFSRDEAGETDILVAIYVDDLVIAGRRE-KVDGFKHNISRCFKMKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECRGVPTPV--GGKVKILAPESAKKPPNRNHLGLGIVGSLMYASTENRPNIAYAVHQAARRMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLEGFANTDWVEDVEDRKSTTGYVFQ 936
            G+D+ ET +PVAR  ++RTV +LAA+H  +L  MDV  A LN  L+E++++K    F    ++  LV RL +S+  LKQ    WNS LD  L  +G  ++T DPC+Y  ++E GE   ++A+YVDD+++AG+ + K++  K  ++  F+MKD+G     L ++V +   +  I I Q  Y + VL+R G +  +   TPV  G K+K  A +S +            VG L+Y ST+ RP+IAYAV   AR    P  E +   KRI   L+   D+G+ +          G+++ DW  D++DRKST+GYVFQ
Sbjct:  207 GDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKE-HLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCA---VGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQ 514          
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 203 bits (516), Expect = 2.590e-54
Identity = 127/321 (39.56%), Postives = 180/321 (56.07%), Query Frame = 1
Query:    4 GEDFF--ETSAPVARMSTLRTVFSLAAKHDFELEGMDVNAA*LNAPLEEKLFVKLSPEFSTFSRDVPLVHRLCKSLYSLKQGG*NWNSTLDDFLVGIGLQRSTTDPCLYFSRDEAGETDILVAIYVDDLVIAGRREKVDGFKHNISRCFKMKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECR--GVP----TPVGGKVKILAP---ESAKKPPNRNHLGLGIVGSLMYASTENRPNIAYAVHQAARRMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLEGFANTDWVEDVEDRKSTTGYVF 933
            G D+   ET APV+R+ ++RT+ SLAA+HD+EL  MDV +A LN  LEE ++++L P F+   +   LV RL K+LY LKQ G  W  TL   +  +G  R   D  +++ R+  GE+ I+VA  VDDL I G  + VD F  +I + F+M DLG L  +L IEVRRDR   TI+ISQ  YI  ++ R   DE     +P    +P+G       P   E  +  P R       VGSLMYA+   RP+I +AV   ++ M++P R  +   KR+   L    +L + +G+ N G  L G+++ DW    E R S +GYVF
Sbjct: 1105 GRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYRE-----AVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYGTNNEG--LRGYSDADWGSSTEHRHSISGYVF 1415          
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Match: A0A2Z7AL20_9LAMI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AL20_9LAMI)

HSP 1 Score: 193 bits (491), Expect = 3.420e-54
Identity = 122/352 (34.66%), Postives = 183/352 (51.99%), Query Frame = 1
Query:    1 EGEDFFETSAPVARMSTLRTVFSLAAKHDFELEGMDVNAA*LNAPLEEKLFVKLSPEFSTFSRDVPLVHRLCKSLYSLKQGG*NWNSTLDDFLVGIGLQRSTTDPCLYFSRDEAGETDILVAIYVDDLVIAG-RREKVDGFKHNISRCFKMKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECRGVPTPVGGKVKILAPESAKKPPNRNHLG----LGIVGSLMYASTENRPNIAYAVHQAARRMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLEGFANTDWVEDVEDRKSTTGYVFQ----AERWCDALVL*EATVSHMVQYRGRVHCCRRS 1029
            EG DF E  + V R++T+R V +L A  D  LE +DV  A L+  LEE++++ L PE    +    LV RL KSLY LKQ    W    D +++ +G  R + DPC YF R   G   I++ +YVDD+++AG  +++V   K  ++R F MKDLG  + +L ++V RDR N  I +SQ +Y+++ L R    + + + TP+    K+ +         R  +        VGSLM+A    RP+IA AV   +R M +P RE +ST KRI   +    +  + FG       L G+ ++D+  D + RKSTTGYVF     A  W   L    A  +   +Y      C+ +
Sbjct:   58 EGIDFNEIFSLVVRLNTVRVVLALCAVFDLHLEQLDVKTAFLHGDLEEEIYM-LQPEGFAETGKENLVCRLKKSLYGLKQAPRCWYKRFDSYIMSLGYNRLSADPCTYFKRS-GGNDYIILLLYVDDMLVAGPNKDRVQELKAQLAREFDMKDLGPANKILGMQVHRDRSNRKIWLSQTNYLQKFLHRFNMQDSKPISTPLPVNFKLSSDMCPSNEAERMEMSRIPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGREHWSTVKRILRYIKGTSNAALCFGGSYLT--LRGYVDSDYAGDPDKRKSTTGYVFTLAGGAVSWVSKLQTVVALSTTEAEYMAATQACKET 405          
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Match: A0A438FU81_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FU81_VITVI)

HSP 1 Score: 191 bits (485), Expect = 1.920e-53
Identity = 112/316 (35.44%), Postives = 173/316 (54.75%), Query Frame = 1
Query:    1 EGEDFFETSAPVARMSTLRTVFSLAAKHDFELEGMDVNAA*LNAPLEEKLFVKLSPEFSTFSRDVPLVHRLCKSLYSLKQGG*NWNSTLDDFLVGIGLQRSTTDPCLYFSRDEAGETDILVAIYVDDLVIAGRR-EKVDGFKHNISRCFKMKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECRGVPTPVGGKVKILAPESAKKPPNRNHLG----LGIVGSLMYASTENRPNIAYAVHQAARRMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLEGFANTDWVEDVEDRKSTTGYVF 933
            EG D+ E  +PV +MS +R V  + A  +  LE +DV    L+  LEE L++ + PE         LV +L KSLY LKQ    W    D+F+  IG +R   D C Y    +   + I++ +YVDD++I G   EK++  K  +S+ F MKDLG+   +L + + RD+ NGT+ +SQ +Y+++VL +   +E + V TP+GG  K+   +S K    R+H+        +GSLMYA    RP+IA+AV   +R M  P ++ +   K I   L    D  + F   +    L+G+ + D+  D++ RKSTTG+VF
Sbjct:   53 EGIDYTEIFSPVVKMSIIRLVLGMVATENLHLEQLDVKTTFLHGDLEEDLYM-IQPEGFIVQGQENLVCKLRKSLYGLKQALRQWYKKFDNFMHRIGFKRCEADHCCYVKSFD--NSYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSKFNMNEAKPVSTPLGGHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLK--LQGYVDADFAGDIDSRKSTTGFVF 363          
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Match: A5BPU0_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BPU0_VITVI)

HSP 1 Score: 195 bits (495), Expect = 4.960e-53
Identity = 114/316 (36.08%), Postives = 175/316 (55.38%), Query Frame = 1
Query:    1 EGEDFFETSAPVARMSTLRTVFSLAAKHDFELEGMDVNAA*LNAPLEEKLFVKLSPEFSTFSRDVPLVHRLCKSLYSLKQGG*NWNSTLDDFLVGIGLQRSTTDPCLYFSRDEAGETDILVAIYVDDLVIAGRR-EKVDGFKHNISRCFKMKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECRGVPTPVGGKVKILAPESAKKPPNRNHLG----LGIVGSLMYASTENRPNIAYAVHQAARRMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLEGFANTDWVEDVEDRKSTTGYVF 933
            EG D+ E  +PV +MST+R V  + A  +  LE +DV  A L+  LEE L++ + PE         LV +L KSLY LKQ    W    D+F+  IG +R   + C YF   +   + I++ +YVDD++IAG   EK++  K  +S+ F MKDLG+   +L + + RD+ NGT+ +SQ +Y+++VL R   +E + V TP+    K+   +S K    ++H+        +GSLMYA    RPNIA+AV   +R M  P ++ +   K I   L    D  + F   +    L+G+ + D+  D++ RKSTTG+VF
Sbjct:  273 EGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYM-IQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEANHCCYFKSFD--NSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLDSHFKLSKEQSPKTEEEKDHMSKVPYASAIGSLMYAMVCTRPNIAHAVGVVSRFMSRPGKQHWEVVKWILRYLKGSLDTCLCFTGASLK--LQGYVDADFAGDIDSRKSTTGFVF 583          
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Match: A0A438CNG4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CNG4_VITVI)

HSP 1 Score: 196 bits (498), Expect = 6.090e-53
Identity = 115/316 (36.39%), Postives = 175/316 (55.38%), Query Frame = 1
Query:    1 EGEDFFETSAPVARMSTLRTVFSLAAKHDFELEGMDVNAA*LNAPLEEKLFVKLSPEFSTFSRDVPLVHRLCKSLYSLKQGG*NWNSTLDDFLVGIGLQRSTTDPCLYFSRDEAGETDILVAIYVDDLVIAGRR-EKVDGFKHNISRCFKMKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECRGVPTPVGGKVKILAPESAKKPPNRNHLG----LGIVGSLMYASTENRPNIAYAVHQAARRMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLEGFANTDWVEDVEDRKSTTGYVF 933
            EG D+ E  +PV +MST+R V  + A  +  LE +DV  A L+  LEE L++ + PE         LV +L KSLY LKQ    W    D+F+  IG +R   D C Y    +   + I++ +YVDD++IAG   EK++  K  +S+ F MKDLG+   +L + + RD+ NGT+ +SQ +Y+++VL R   +E + V TP+G   K+   +S K    R+H+        +GSLMYA    RP+IA+AV   +R M  P ++ +   K I   L    D  + F   +    L+G+ + D+  D++ RKSTTG+VF
Sbjct:  281 EGIDYTEIFSPVVKMSTIRLVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYM-IQPEGFIVQGQENLVCKLRKSLYGLKQAPRQWYKKFDNFMHRIGFKRCEADHCCYVKSFD--NSYIILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGASLK--LQGYVDADFAGDIDSRKSTTGFVF 591          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6331.14124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A409WVI7_9AGAR4.160e-5739.76Integrase catalytic domain-containing protein (Fra... [more]
A0A7D9KES8_PARCT4.740e-5738.54Retrovirus-related Pol poly from transposon TNT 1-... [more]
UPI001C91A6834.980e-5736.16hypothetical protein n=1 Tax=Modestobacter lapidis... [more]
A0A0C9RAA9_9HYME8.900e-5637.97POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus ... [more]
A0A6S7JEY7_PARCT2.200e-5437.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RWY5_9APHY2.590e-5439.56Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A2Z7AL20_9LAMI3.420e-5434.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438FU81_VITVI1.920e-5335.44Retrovirus-related Pol polyprotein from transposon... [more]
A5BPU0_VITVI4.960e-5336.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438CNG4_VITVI6.090e-5336.39Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6331contigH-paniculata_contig6331:11502..12694 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score104.0
Seed ortholog evalue7.3e-20
Seed eggNOG ortholog164328.Phyra82631
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QIGP@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size1120
Cds size522
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6331.14124.1prot_H-paniculata_contig6331.14124.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6331 11949..12543 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930730.0797198-UTR-H-paniculata_contig6331:11501..119481622930730.0797198-UTR-H-paniculata_contig6331:11501..11948Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6331 11502..11948 +
1691481426.5106678-UTR-H-paniculata_contig6331:11501..119481691481426.5106678-UTR-H-paniculata_contig6331:11501..11948Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6331 11502..11948 +
1622930730.124777-UTR-H-paniculata_contig6331:12543..126941622930730.124777-UTR-H-paniculata_contig6331:12543..12694Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6331 12544..12694 +
1691481426.5375268-UTR-H-paniculata_contig6331:12543..126941691481426.5375268-UTR-H-paniculata_contig6331:12543..12694Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig6331 12544..12694 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930730.0953536-CDS-H-paniculata_contig6331:11948..121691622930730.0953536-CDS-H-paniculata_contig6331:11948..12169Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6331 11949..12169 +
1691481426.5206597-CDS-H-paniculata_contig6331:11948..121691691481426.5206597-CDS-H-paniculata_contig6331:11948..12169Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6331 11949..12169 +
1622930730.1112583-CDS-H-paniculata_contig6331:12242..125431622930730.1112583-CDS-H-paniculata_contig6331:12242..12543Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6331 12243..12543 +
1691481426.5289047-CDS-H-paniculata_contig6331:12242..125431691481426.5289047-CDS-H-paniculata_contig6331:12242..12543Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6331 12243..12543 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6331.14124.1

>prot_H-paniculata_contig6331.14124.1 ID=prot_H-paniculata_contig6331.14124.1|Name=mRNA_H-paniculata_contig6331.14124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp
MKDLGSLSLVLRIEVRRDRPNGTISISQGDYIREVLKRCGFDECRGVPTP
VGGKVKILAPESAKKPPNRNHLGLGIVGSLMYASTENRPNIAYAVHQAAR
RMEDPCREDFSTCKRIFCCLSTVPDLGITFGSKNNGHGLEGFANTDWVED
VEDRKSTTGYVFQAERWCDALVL*
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mRNA from alignment at H-paniculata_contig6331:11502..12694+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6331.14124.1 ID=mRNA_H-paniculata_contig6331.14124.1|Name=mRNA_H-paniculata_contig6331.14124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1193bp|location=Sequence derived from alignment at H-paniculata_contig6331:11502..12694+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGGGTGAAGATTTCTTTGAAACCAGTGCTCCCGTAGCTCGCATGTCGAC ATTGCGTACTGTTTTCAGCCTGGCCGCCAAACATGATTTCGAACTAGAAG GCATGGACGTAAATGCGGCGTAATTGAACGCCCCCTTAGAGGAAAAGCTG TTTGTTAAGCTATCCCCCGAGTTTTCCACCTTCTCCCGAGACGTACCACT TGTGCACCGCTTGTGTAAAAGCCTGTATAGCCTCAAGCAGGGCGGCTGAA ACTGGAATAGCACTCTTGACGATTTTCTTGTTGGGATAGGACTCCAACGT TCCACTACCGACCCGTGCTTGTATTTCTCTCGCGACGAAGCGGGAGAGAC AGACATTCTCGTGGCCATCTATGTTGACGACTTGGTCATCGCTGGACGTC GCGAGAAAGTAGATGGGTTCAAGCACAACATAAGTCGGTGTTTTAAGATG AAAGACTTGGGCTCCCTCTCGCTCGTGTTGAGAATAGAAGTACGACGTGA CCGCCCTAATGGTACTATATCAATATCCCAAGGTGACTACATCCGCGAGG TACTGAAAAGATGCGGTTTTGACGAGTGTCGAGGCGTGCCCACTCCTGTG GGGGGAAAAGTGAAGATTTTGGCACCCGAGTCGGCCAAGAAGCCCCCGAA CCGAAACCACTTGGGGCTGTACTGTCGGATATAGGCGCAGGAGTACAAGA CAGCAGCATTGGGAGAAGTGGCAATTCATCTGAATATGCAGAGGCATAGT AGGATCACTCATGTACGCCTCGACAGAAAATAGACCTAATATAGCATACG CGGTACACCAAGCAGCACGTCGTATGGAAGACCCATGTCGGGAAGACTTC AGTACATGCAAGCGCATTTTTTGTTGTCTCAGTACTGTGCCTGACCTCGG CATTACGTTCGGTAGTAAGAATAATGGTCACGGTCTGGAAGGATTCGCTA ATACCGATTGGGTGGAAGATGTCGAGGACCGAAAGTCCACAACAGGATAC GTCTTTCAAGCTGAACGGTGGTGCGATGCGTTGGTTCTCTAGGAAGCAAC AGTTAGTCACATGGTGCAGTACAGGGGCAGAGTACATTGCTGCAGGAGAA GCGAGAAAGGAGACGGTACATCTTAAGGATTTGCTAGGATCGATAGGTTT TGAATGCAGGGGGAGCACGACATTATTTGAGGACAACAACTCA
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Coding sequence (CDS) from alignment at H-paniculata_contig6331:11502..12694+

>mRNA_H-paniculata_contig6331.14124.1 ID=mRNA_H-paniculata_contig6331.14124.1|Name=mRNA_H-paniculata_contig6331.14124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at H-paniculata_contig6331:11502..12694+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAGACTTGGGCTCCCTCTCGCTCGTGTTGAGAATAGAAGTACGACG
TGACCGCCCTAATGGTACTATATCAATATCCCAAGGTGACTACATCCGCG
AGGTACTGAAAAGATGCGGTTTTGACGAGTGTCGAGGCGTGCCCACTCCT
GTGGGGGGAAAAGTGAAGATTTTGGCACCCGAGTCGGCCAAGAAGCCCCC
GAACCGAAACCACTTGGGGCTATGAAAGACTTGGGCTCCCTCTCGCTCGT
GTTGAGAATAGAAGTACGACGTGACCGCCCTAATGGTACTATATCAATAT
CCCAAGGTGACTACATCCGCGAGGTACTGAAAAGATGCGGTTTTGACGAG
TGTCGAGGCGTGCCCACTCCTGTGGGGGGAAAAGTGAAGATTTTGGCACC
CGAGTCGGCCAAGAAGCCCCCGAACCGAAACCACTTGGGGCTAGGCATAG
TAGGATCACTCATGTACGCCTCGACAGAAAATAGACCTAATATAGCATAC
GCGGTACACCAAGCAGCACGTCGTATGGAAGACCCATGTCGGGAAGACTT
CAGTACATGCAAGCGCATTTTTTGTTGTCTCAGTACTGTGCCTGACCTCG
GCATTACGTTCGGTAGTAAGAATAATGGTCACGGTCTGGAAGGATTCGCT
AATACCGATTGGGTGGAAGATGTCGAGGACCGAAAGTCCACAACAGGATA
CGTCTTTCAAGCTGAACGGTGGTGCGATGCGTTGGTTCTCTAGAGGCATA
GTAGGATCACTCATGTACGCCTCGACAGAAAATAGACCTAATATAGCATA
CGCGGTACACCAAGCAGCACGTCGTATGGAAGACCCATGTCGGGAAGACT
TCAGTACATGCAAGCGCATTTTTTGTTGTCTCAGTACTGTGCCTGACCTC
GGCATTACGTTCGGTAGTAAGAATAATGGTCACGGTCTGGAAGGATTCGC
TAATACCGATTGGGTGGAAGATGTCGAGGACCGAAAGTCCACAACAGGAT
ACGTCTTTCAAGCTGAACGGTGGTGCGATGCGTTGGTTCTCTAG
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