mRNA_H-paniculata_contig632.14110.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig632.14110.1
Unique NamemRNA_H-paniculata_contig632.14110.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Match: D8LBD4_ECTSI (PNPLA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD4_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 6.360e-131
Identity = 184/272 (67.65%), Postives = 225/272 (82.72%), Query Frame = 1 
Query:  253 TLTSKVGISFTPGGLLFPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAGSVFKECRNGGPAFRLKDIVARGLDNALPENAHDILNKREGRVTIGVTEL-FPR-PKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDGFFATPVKHFGAPGIPSADEIIRVTVFPTTSIEVHAEQPGGVISPDLLDRYSSGRFLELLNYALNPGNEVLTEELFNAGFESGAVWCERYGDACRKRHEERHGSSEVA 1062
            TL+S++G SFTPGGLLFPYHLGVAKCL   G L+ DT LAG+SAGALAA VVGCGL I+ A +L+G VF +C +GG AFRL++IV +GLD ALPE+AH+ILN REG VT+G+T+L FP   K +FVS F S+ DLIEVLLGSCHVPFWFSG PYM VRG+PTVDGFFA P   FGAP IP+ADE++R+TVFPTTS+ + +++PG +ISPDLLDRY SGRF+ELLNYALNPGN+ + EELFNAGFESG VWC++YG+  R+RHEE++    +A
Sbjct:   39 TLSSQIGFSFTPGGLLFPYHLGVAKCLEMEGFLSNDTPLAGSSAGALAAVVVGCGLSIDTAAELSGRVFDDCSDGGAAFRLRNIVQKGLDGALPEDAHEILNNREGAVTVGITQLGFPSLKKSVFVSNFESRADLIEVLLGSCHVPFWFSGQPYMQVRGQPTVDGFFAMPRAQFGAPDIPTADEVVRITVFPTTSVPMQSDKPGDLISPDLLDRYQSGRFMELLNYALNPGNDFVQEELFNAGFESGGVWCDKYGEDYRRRHEEKYSPEMLA 310
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BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Match: A0A836C9S6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9S6_9STRA)

HSP 1 Score: 215 bits (547), Expect = 6.980e-65
Identity = 112/249 (44.98%), Postives = 152/249 (61.04%), Query Frame = 1 
Query:  271 GISFTPGGLLFPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAGSVFKECRNGGPAFRLKDIVARGLDNALPENAHDILNKREGRVTIGVTELFPRPKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDGFFATPVKHFGAPGIPSADEIIRVTVFPTTSIEVHAEQPGGVISPDLLDRYSSGRFL-ELLNYALNPGNEVLTEELFNAGFESGAVWCERYGD 1014
            G+SFTPGGLLFPY LG+     + G L  +  +AG+SAGAL   VVG GLD+    +   ++ ++CR GG   RL+ ++   L   LPE+ H+ LN R    ++G T L P P G  VSEF+SKED+I  LL SCHVP+WF+GSP   VRG+  VDGFF TP  +FGA  +P A   +RV+ FP+    + A     VI+PDLL     G F  ++L  ALNPG+     +LF  G ++G +W ++YGD
Sbjct:    3 GLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPVPRAARTLRVSAFPSAIARIDAAHESEVIAPDLL---GEGAFAADMLVMALNPGSTEQLTKLFEDGRKTGEIWLQKYGD 248
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BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Match: A0A835YPA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA3_9STRA)

HSP 1 Score: 203 bits (517), Expect = 3.870e-59
Identity = 108/266 (40.60%), Postives = 151/266 (56.77%), Query Frame = 1 
Query:  268 VGISFTPGGLLFPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAGSVFKECRNGGPAFRLKDIVARGLDNALPENAHDILNKREGRVTI---GVTELFPRPKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDGFFATPVKHFGAPGIPSADEIIRVTVFPTTSIEVHAEQPGGVISPDLLDRYSSGRFLELLNYALNPGNEVLTEELFNAGFESGAVWCERYGDACRKRHEERHGSSE 1056
            VG SFTPGGLLFPY +G+AK L + GLL   T L G SAG+L A  V  GL  +   +   ++  +CR  G   RL   + + L   LP + H  LN R G   +    VT     P G   +E+ S+ED+I  LL SCHVPFW +G P   VRG+  +DGFF TP KHFGAP IP A   +RV+ FP     + A   GG+ISPDLL    S     +++ A+NPG+    ++L++ G +S  +W +++G+  R  H++ H + +
Sbjct:   67 VGFSFTPGGLLFPYQIGIAKALVEAGLLKDSTPLVGGSAGSLTAVTVASGLCTDAVMEEVQALCADCRAHGTGLRLHGALLKSLHAMLPRDVHATLNARAGACGVLYATVTAALSLPVGTVATEYESREDVIHCLLASCHVPFWLNGLPATSVRGRYAIDGFFGTPAKHFGAPDIPYAQHTVRVSAFPAQFARIEASTEGGLISPDLLGSRRSAA--AMMSLAMNPGSAQQVKDLYDDGLQSAQLWLDQHGERFRD-HQDAHDAEQ 329
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BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Match: A0A6S9HSH1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HSH1_HETAK)

HSP 1 Score: 182 bits (462), Expect = 8.720e-51
Identity = 111/276 (40.22%), Postives = 152/276 (55.07%), Query Frame = 1 
Query:  265 KVGISFTPGGLLFPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAGSVFKECRNGGPAFRLKDIVARGLDNALPENAHDILNKREGRVTIGVTEL----FPRPKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDGFFATPVKHFGAPGIPS--ADEIIRVTVFPTTSIEVHAEQPGGVISPDLLDRYSSGRFLELLNYALNPGNEVLTEELFNAGFESGAVWCER--YGDACRKRHEE--RHGSSEVA 1062
            + G SF+PGGLLFPY +G+AK L + GL+  DT L GASAGAL A  +G GLDI++     G +  E R  G    +   + R L+  LPE+ H++LN+R G V + VT L     P P+G  +  + SK D+IEVL+ SC+VP W + +P +  RG+P +DGFF  P   FGA  +    A   +RV   P   ++V    PG VISP + D   +  F +LL  ALNP  +   EEL+  G   GA W     +G  C +  EE   H S + A
Sbjct:   61 RFGFSFSPGGLLFPYQIGIAKYLLEAGLITEDTPLCGASAGALCAVALGAGLDIDVLFAACGDLMAELRPKGARHHIWHALRRQLETFLPEDVHEVLNRRPGGVGVAVTFLVGGYLPYPRGEVIFHWRSKADVIEVLMASCNVPMWTTWTPMVRCRGRPAMDGFFGQPKGCFGAAALHPHRARHTVRVLPGPQADVDVRCTIPGDVISPSV-DPSFTQTFKDLLQDALNPYGQERLEELYAQGQRDGARWHAHGDFGRLCARVPEEVMMHSSHKAA 335
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BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Match: A0A6S9J7B1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9J7B1_HETAK)

HSP 1 Score: 181 bits (458), Expect = 1.240e-50
Identity = 101/251 (40.24%), Postives = 143/251 (56.97%), Query Frame = 1 
Query:  265 KVGISFTPGGLLFPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAGSVFKECR-NGGPAFRLKDIVARGLDNALPENAHDILNKREGRVTIGVTELFPRPKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDGFFATPVKHFGAP--GIPSADEIIRVTVFPTTSIEVHAEQPGGVISPDLLDRYSSGRFLELLNYALNPGNEVLTEELFNAGFESGAVWCERY 1008
            + G +F+PGGLLFPY LGVAK L + GLL   T ++GASAGAL + V    +D   A    G +  EC   GG  + ++  +   L++ LP +  D+LN R G   + VTE+ P P+G  V+EF S+ D++E+LL SC VPFWF+  P +  RG+P VDGFFA P + FG P  G   A   +RV  FP+ S+ + +  PG ++SPD+   +    F ELL  AL+  +  L   L  AG      W  ++
Sbjct:   77 RFGFAFSPGGLLFPYQLGVAKALVETGLLTDKTPISGASAGALVSVVAAANIDFAEALDGCGEILAECAAKGGAQYNIRGALESQLNDLLPLDVADLLNNRPGGCGVVVTEMSPLPRGRVVTEFRSRRDVVELLLASCCVPFWFTPGPAIMCRGRPHVDGFFAFPREAFGCPDLGPAGAATTVRVLPFPSASLGMQSTVPGDILSPDIDPEFPYA-FQELLALALSTYDGALLRGLHGAGEAHAGRWAAKH 326
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BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Match: A0A0G4EYL2_VITBC (PNPLA domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EYL2_VITBC)

HSP 1 Score: 180 bits (457), Expect = 2.500e-49
Identity = 101/243 (41.56%), Postives = 142/243 (58.44%), Query Frame = 1 
Query:  268 VGISFTPGGLLFPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAGSVFKECRNGGPAFRLKDIVARGLDNALPENAHDILNKREGRVTIGVTELFPRPKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDGFFATPVKHFGAPGIPSADEIIRVTVFPTTSIEVHAEQPGGVISPDLLDRYSSGRFLELLNYALNPGNEVLTEELFNAGFESGAVW 996
            +G SF+P GLL PYHLG A  L K G++   T ++GASAG+L A  VG GL  + A +    +  +CR  G   RL D + + LD  LP +AH+ LN R   VT+  TE+FP P G  VS+F S++DLIEVL  SC VPF+FS  P +  RGK   DGFFA+ +  FG P + +A   +R++ FP + + + A  P  VI+PDL  ++      +L+  +L P +E   E L+  G +  A W
Sbjct:  156 IGFSFSPAGLLIPYHLGAAFHLRKMGVITNATPISGASAGSLTACAVGMGLAADNAVRAVQRLAADCREKGTRSRLHDCLMKELDELLPPDAHEQLNGRAAPVTVAYTEVFPYPAGRLVSQFDSRDDLIEVLCASCCVPFYFSAWPLVQCRGKVAADGFFASELGAFGCPVV-AARRTVRISPFPASVVGLKAMGPNDVITPDLNPQFPLS-MPKLIQMSLLPADEDEFELLYQLGQQDAAEW 396
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BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Match: A0A2K1JVH4_PHYPA (Patatin n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JVH4_PHYPA)

HSP 1 Score: 163 bits (413), Expect = 4.390e-43
Identity = 96/248 (38.71%), Postives = 138/248 (55.65%), Query Frame = 1 
Query:  271 GISFTPGGLLFPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAGSVFKECRNGGPAFRLKDIVARGLDNALPENAHDILNKREGRVTIGVTELFPRPKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDG---FFATPVKHFGAPGIPSADEIIRVTVFPTTSIEVHAEQPGGVISPDLLDRYSSGRFLELLNYALNPGNEVLTEELFNAGFESGAVWCER 1005
            G SF+  GLLFPYHLGV +CL +NG +  +T LAG+SAGAL  AV+G GL    A +    +  +CR  G AFRL  ++   L+  LPE+ H  +N   G++ + VT++F +P+G+ V  F S+EDLI  LL SC +P + +  P    R +  VDG   FF  P          +AD+ +RV  FP  +       P G ISPDL    +     +L N+AL P  +V+ +ELF+ GF+    W ++
Sbjct:  168 GFSFSAAGLLFPYHLGVCQCLIENGYITENTPLAGSSAGALVCAVIGSGLSTYDALQATKELALDCRTYGTAFRLGAVLRNFLEKFLPEDVHLKVN---GKIRVAVTQVFRQPRGLLVDFFDSREDLINALLTSCFIPGYLAPRPVTMFRNRICVDGGITFFMPPT---------AADKTVRVCAFPLYA-------PEG-ISPDLNPGETRAGMRQLFNWALEPAEDVILDELFDLGFQDALAWVKK 395
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BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Match: UPI00053C60AA (patanin-like phospholipase domain-containing protein isoform X2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C60AA)

HSP 1 Score: 157 bits (396), Expect = 5.860e-41
Identity = 94/253 (37.15%), Postives = 137/253 (54.15%), Query Frame = 1 
Query:  256 LTSKVGISFTPGGLLFPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAGSVFKECRNGGPAFRLKDIVARGLDNALPENAHDILNKREGRVTIGVTELFPRPKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDG---FFATPVKHFGAPGIPSADEIIRVTVFPTTSIEVHAEQPGGVISPDLLDRYSSGRFLELLNYALNPGNEVLTEELFNAGFESGAVWCER 1005
            + +  G SF+ GGLLFPYHLGVA+ L + G +   T LAG+SAGA+  AV+ CGL +  A +   ++  +CR  G AFRL  ++   L+  LP++AH   N   GR+ + VT++  RP+G+ V +F SK DLI  L  S  +P +FS SP    R +  +DG   FF  P          SA + IRV+ FP ++  V     G  ISPD  +  +     +L+N+A  P  +   + LF  G+   A W E+
Sbjct:  119 IVTSPGFSFSVGGLLFPYHLGVAQFLIEKGYIKETTPLAGSSAGAIICAVIACGLSMQKALEATKTIADDCRRKGTAFRLGALLRDCLEELLPDDAHTSCN---GRIRVAVTQITWRPRGLLVDQFDSKGDLINALFTSSFIPGYFSASPATVFRNRLCIDGGLTFFMPPT---------SASKTIRVSAFPASTFGVK----GIAISPDC-NPENRATPRQLINWAFEPAEDEALDRLFELGYADAASWAEK 354
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BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Match: A0A7S0YLQ9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YLQ9_9CRYP)

HSP 1 Score: 155 bits (391), Expect = 9.850e-41
Identity = 78/161 (48.45%), Postives = 106/161 (65.84%), Query Frame = 1 
Query:  271 GISFTPGGLLFPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAGSVFKECRNGGPA-FRLKDIVARGLDNALPENAHDILNKREGRVTIGVTELFPRPKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDGFFA 750
            G SF+  GLLFPYHLGVA+ +   GLL T T L+GAS GA+AA VV    D++     A   F  CR GG A FRL  ++A  L + LP++AH+ +N  EG VTIG+T + P P+G+ VS F+SK ++I+ +L SCH+P+W +G P    RG P +DG+FA
Sbjct:   48 GFSFSVAGLLFPYHLGVAQEMRDQGLLHTGTPLSGASGGAIAAVVVAMDGDMDGFLDAAQDAFTRCRAGGTARFRLSQLLAETLSDVLPDDAHERINAWEGGVTIGITRMDPLPRGLSVSRFTSKAEVIDAVLASCHIPYWVNGQPATMFRGTPAIDGYFA 208
[Close]
BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Match: A0A7R9U7Q7_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Q7_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.020e-40
Identity = 99/257 (38.52%), Postives = 141/257 (54.86%), Query Frame = 1 
Query:  265 KVGISFTPGGLLFPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAGSVFKECRNGGPAFRLKDIVARGLDNALPENAHDILNKREGRVTIGVTELFPRPKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDGFFATPVKHFGAPGIPSADEIIRVTVFPTTSIEVHAEQPGGVISPDLLD-RYSSGRFLELLNYALNP-----GNEVLTEELFNAGFESGAVWCERYGDA 1017
            +VG SF+P GLL  YH+GVA  LA+ G+L   T +AGAS G+L AA +   L  + A      V + CR+ G A RL   +   L++ L E+ +  +  REG + +  TE++P  +GI  SEFS+++DL+EVL  SC +PF+ +GSPY   RG    DGFFA+P   F +P +PSAD+ + ++ F T   +         ISPD     +SS   L L   AL+P     G + + E L+ AG      W  R G A
Sbjct:   10 RVGFSFSPAGLLTAYHMGVAYSLARAGILTKKTPVAGASGGSLTAAAIAANLSEDTAMDTCVRVSELCRSSGTALRLHGHLQLCLNDILGEDEYKAVIGREGLLAVAYTEMYPSFRGITTSEFSNRQDLLEVLSASCFIPFYSAGSPYTRCRGAYCCDGFFASPSAQFFSPVVPSADKTVFISPFSTKIYDWGKGLES--ISPDPETFPFSSADTLRL---ALSPPTLSEGGDKVLETLWAAGERDAQEWQARPGKA 261
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig632.14110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBD4_ECTSI6.360e-13167.65PNPLA domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836C9S6_9STRA6.980e-6544.98Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YPA3_9STRA3.870e-5940.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9HSH1_HETAK8.720e-5140.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6S9J7B1_HETAK1.240e-5040.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4EYL2_VITBC2.500e-4941.56PNPLA domain-containing protein n=2 Tax=Vitrella b... [more]
A0A2K1JVH4_PHYPA4.390e-4338.71Patatin n=2 Tax=Physcomitrium patens TaxID=3218 Re... [more]
UPI00053C60AA5.860e-4137.15patanin-like phospholipase domain-containing prote... [more]
A0A7S0YLQ9_9CRYP9.850e-4148.45Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7R9U7Q7_9STRA2.020e-4038.52Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig632contigH-paniculata_contig632:10384..15408 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.0
Seed ortholog evalue2.3e-105
Seed eggNOG ortholog2880.D8LBD4
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004806,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005811,GO:0005829,GO:0005886,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006996,GO:0008150,GO:0008152,GO:0009056,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010876,GO:0010883,GO:0010888,GO:0010889,GO:0010891,GO:0010896,GO:0010898,GO:0016020,GO:0016042,GO:0016043,GO:0016298,GO:0016787,GO:0016788,GO:0019216,GO:0019222,GO:0019433,GO:0019915,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031974,GO:0031981,GO:0032879,GO:0033036,GO:0034389,GO:0042592,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045834,GO:0046461,GO:0046464,GO:0046486,GO:0046503,GO:0048518,GO:0048519,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050994,GO:0050996,GO:0051179,GO:0051235,GO:0052689,GO:0055088,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090207,GO:0090208,GO:1901575,GO:1905952,GO:1905953
EggNOG free text desc.triglyceride catabolic process
EggNOG OGsKOG3773@1,KOG3773@2759
Ec32 ortholog descriptionAcyl transferase/acyl hydrolase/lysophospholipase
Ec32 orthologEc-27_004350.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1064
Cds size1062
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930727.9703286-CDS-H-paniculata_contig632:10383..104561622930727.9703286-CDS-H-paniculata_contig632:10383..10456Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 10384..10456 -
1691481425.613199-CDS-H-paniculata_contig632:10383..104561691481425.613199-CDS-H-paniculata_contig632:10383..10456Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 10384..10456 -
1622930727.990905-CDS-H-paniculata_contig632:10836..109381622930727.990905-CDS-H-paniculata_contig632:10836..10938Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 10837..10938 -
1691481425.6263094-CDS-H-paniculata_contig632:10836..109381691481425.6263094-CDS-H-paniculata_contig632:10836..10938Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 10837..10938 -
1622930728.0076728-CDS-H-paniculata_contig632:11401..115891622930728.0076728-CDS-H-paniculata_contig632:11401..11589Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 11402..11589 -
1691481425.6350873-CDS-H-paniculata_contig632:11401..115891691481425.6350873-CDS-H-paniculata_contig632:11401..11589Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 11402..11589 -
1622930728.023475-CDS-H-paniculata_contig632:11990..120151622930728.023475-CDS-H-paniculata_contig632:11990..12015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 11991..12015 -
1691481425.6448953-CDS-H-paniculata_contig632:11990..120151691481425.6448953-CDS-H-paniculata_contig632:11990..12015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 11991..12015 -
1622930728.0434344-CDS-H-paniculata_contig632:12525..127021622930728.0434344-CDS-H-paniculata_contig632:12525..12702Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 12526..12702 -
1691481425.654447-CDS-H-paniculata_contig632:12525..127021691481425.654447-CDS-H-paniculata_contig632:12525..12702Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 12526..12702 -
1622930728.066375-CDS-H-paniculata_contig632:14114..142251622930728.066375-CDS-H-paniculata_contig632:14114..14225Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 14115..14225 -
1691481425.6645668-CDS-H-paniculata_contig632:14114..142251691481425.6645668-CDS-H-paniculata_contig632:14114..14225Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 14115..14225 -
1622930728.0807056-CDS-H-paniculata_contig632:15022..154081622930728.0807056-CDS-H-paniculata_contig632:15022..15408Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 15023..15408 -
1691481425.6744022-CDS-H-paniculata_contig632:15022..154081691481425.6744022-CDS-H-paniculata_contig632:15022..15408Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig632 15023..15408 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig632.14110.1prot_H-paniculata_contig632.14110.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig632 10384..15408 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig632.14110.1

>prot_H-paniculata_contig632.14110.1 ID=prot_H-paniculata_contig632.14110.1|Name=mRNA_H-paniculata_contig632.14110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=354bp
NVISFPSSIYPVTDLTCNYMVQCSSMSQVVYKYSFFLGTAGFCQAFSRHI
SFQPQAVTSKLTSAGVSCRALSHDVASSVNYLPPTLTSKVGISFTPGGLL
FPYHLGVAKCLAKNGLLATDTSLAGASAGALAAAVVGCGLDINMAKKLAG
SVFKECRNGGPAFRLKDIVARGLDNALPENAHDILNKREGRVTIGVTELF
PRPKGIFVSEFSSKEDLIEVLLGSCHVPFWFSGSPYMYVRGKPTVDGFFA
TPVKHFGAPGIPSADEIIRVTVFPTTSIEVHAEQPGGVISPDLLDRYSSG
RFLELLNYALNPGNEVLTEELFNAGFESGAVWCERYGDACRKRHEERHGS
SEVA
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mRNA from alignment at H-paniculata_contig632:10384..15408-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig632.14110.1 ID=mRNA_H-paniculata_contig632.14110.1|Name=mRNA_H-paniculata_contig632.14110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5025bp|location=Sequence derived from alignment at H-paniculata_contig632:10384..15408- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACGTGATCAGTTTCCCAAGCAGTATCTACCCCGTAACCGATCTCACTTG
TAACTACATGGTGCAATGCAGCAGTATGTCGCAAGTTGTGTACAAGTACA
GCTTCTTCTTGGGTACGGCAGGTTTTTGTCAAGCATTTTCGCGCCACATT
AGTTTTCAGCCCCAAGCGGTTACTAGCAAGCTGACATCGGCAGGTGTCTC
CTGCCGTGCTCTGTCTCACGATGTCGCAAGTAGTGTCAACTATCTACCCC
CAACCCTCACTAGTAAAGTGGGAATCTCTTTCACTCCCGGAGGCTTGCTC
TTCCCGTATCATCTCGGGGTGGCTAAGTGCTTGGCGAAAAATGGCTTGTT
GGCGACAGACACTTCATTGGCGGGTGCTTCCGCAGGGTGAGAGACAAGTG
GCTACCCATTTCCAACATGGAACGTTTTACCTTTAGTCTTCGACGATATT
CTTGTGAACAGACAAGCGGGGATAGCGGGTGCTTTGACGCCTCTCCTTTG
CATATGGCAGGTTTCTACCTTCTAGCTGCAGGACGGATGCGAACAGTACT
CGAATCCTTTTTCAAAGAGAAGTAAATATGCATGGGCTGGGGATCCATCT
ATCTACTTTCTGCCGTATTTAGTTCAAGGTAACAAATGTCTATTGTCTGT
CTGCAGCATCAAGGGTAGCATTTCAAATGTGCCATGAAACTTGGATTTGG
GGCGAGTGGCGATGTCGCGTTGATGCATACTGCGGTACGCAACAGTCCTG
TCGCATACAGCATACCAGCTAGACAGACGTCCGGTGCTTCTCCGGCTTAT
GGACATTGGCCATCTCGTCGGGTGGTTTCTTGGAGCAGCAGTCACTTACT
ATAGTCCTCCTTTTCAAAATGCTGTTGTCCCAACAAATTGCCAGGTGTAA
ATCTCAATCCACAGTCTCGTAAGTAATTGGTAAATAGGTTCGTAAGTTCA
ACGCCTCTTTCGCTTTGCTTATTGCAGCAGACAACAGTACGTCAGTATTG
CTTTTCCACCGGGCTAAGACAGGTTCTGAGGTCGCCGTAAAGATAATCGT
TCAAAAAACCAGCTATGCTTTCTTGTTTTGCATTTTGCGCTGTGCTGTGG
TCCCCAGTCGTCCGATCTACCTGGCTGTACTAAGGATGTTCCCGATGCTT
GCTGCGTTTGGCATCTGGTCCTGCCCCCTCAAGAGCGCTCGCCGCGGCGG
TTGTAGGGTGCGGTTTGGATATTAATATGGCCAAGAAGCTGGCTGGCTCA
GTTTTCAAGGAGTGCAGGAACGGTGGCCCGGCCTTCAGACTAAAGTGAGA
TCCCGCCCGATACCTGCGTTTTGCGCGCTTCTCACCGAGAGTCATTTCCT
AGAGTCCCATTTCTTCAGGTGCGTGTGTTTTTAACGGCGTATAGAACGGG
CACCATTAAGGAAAGCAGTATTCTAAAGGTACCACAATAAAGCTACACTT
CTTGAGAACAGACAAGCGGCGTAGTTTTTTTCAAAGTCCAAGTGGCCATC
GTGTTTCCCAGGGCCGCCGCTTGTCTGTTCCCAAGAAGTGTAGCTTTATT
GTGGTACCTTTAGAATACTGCTTTCCTCGATGGTACCCGTTCTATACGCG
ATTTCAAAAATGAAAAAAACATCGACAACACCCCTGCATTTTTTTGGGTC
CAAACTTCTAAATGTATATTGTTTGTTTTGGTTAACTACTGGCAGGCGCA
TTTTTTGCGTAAATCTGGAAATTTCCAGGTTTCCAGATTTTCGGGTTGTC
ATCAAGAGCCAAGATTTACCCTTCTAAATGTATATTGTTTGTTTTGGTTA
ACTACTGGCAGGCGCATTTTTTGCGTAAATCTGGAAATTTCCAGGTTTCC
AGATTTTCGGGTTGTCATCAAGAGCCAAGATTTACCCGAAAGAACTGGCA
ACCGTTGTTTTTGTGCTTCCCTTAATGCCTTTGGGGCTGGATATCGTCTC
GAAACACCATCTTATCTATACAAAAACACACAAGGAATAATAACGAAACG
AAGGCTCGTATGGGCATGAAAACCTGCTAATATATCTCCGAGAAAAGCTG
CAGCTGTTGTTGACCACCGCAACAAACGTCGAACTCGACATCCAGCGAGA
GTGACATGTGAGCATCGGGTACGTTTGAAAGGGCTGCGAAGTGCCACGCT
TTGTTTGAGAACGCGTGAGCTTTTTTGCACTGAAAGGAGATGGTAAGTAT
CAAAAATGGTGTCCCTGGGACATATCTGTGTCACCAGCATAGATATTCCC
CCGTCTATGGCTCCTTAGTCAAATTGGGCAGCTTTCTCAGAGATTCGCCG
CAGGCTCCTAAAGTCTGCCCACCACCTTACCGAGTGTACATATGTATGGG
TGATGATCTCCACCCCTAATTGCTACCAAAACCGTGCGGTGAAACGTTCC
TGTACTTTTTTTGTTGATTTCTCCAGACTAGATCGATATTTTTCCAAGTC
CCGTTGGTCACCTTGCCAAAAGACCCATAGGTATCCCAGGGTTTTTTCGC
GAGTCTACGGCGCTGTAGTAGGTGACACCTTTTTGAGCCACATTTGGCAA
CGTAGAAAAGAGCGACTGGCCATCGGAAATCGCTATGACATGAACAAAGC
TCTGTCCTTCCGAGGACGCGCGATCAATGATATAACATCTACGCTGTGCA
AACATGATTGCCCCCCCCTCCCCCTCCTCCCCTATTGAAACCGTTTCTAA
CATGAGGGACATCGTGGCACGAGGGCTCGATAACGCACTGCCGGAAAATG
CTCACGACATCCTGAACAAAAGAGAAGGAAGGGTTACTATTGGTGTAACC
GAACTGTTCCCGCGACCCAAAGGTATCTTCGTCAGCGAGTTCTCATCGAA
GGAGGACCTCATCGAGGTTTTGCTCGGATCATGGTGAGAGCACAGTGCAT
GATAGCGGGAAAACGTAATATATCGACTATTGCATGTTGTAAGTCCACCT
TCTAAAAGTCTAGGGCTTTTTGCAGCCTGAATGGGGGCGCAGTTCTTCGA
GAGAGATCCTTACTCGACAGTCAACTATTTCCGATACACTGTATCTGGGT
GCACCACTCGCGTAACTTGGCGTTTTTCGTCACCTTATGTAAGAACCGCG
ACTGAACCACTAACTATTGCACTCGCCACTACCGGTGCATATATGCAGAC
GACGGAGTGGTAGCTTTCGGCAGCGTTTATGCATGATGTCGAGTCGATAC
CGCCGCCCGCAATTACGAATTCAAGCATGGGAACTCTGGCAGCACAACGT
GTGTGGCCTTCTAGCCAACTGTGACACTAACAATGATGACACGTTGGATA
AATCGTTGCTCCCATTTGCGCTGCCTGCTACCGCACTTTCTTTTGCACTA
CAACTATCTACGCTGTGGCGTGGTGCGGGTCTTGGAACGTCAGCCATGTG
CCGTTTTGGTTCAGTGGGGTGAGCGCTTCGCGAGCAGTCCAACGTTTCGT
GACGGGTGACTTTTTCCAGTGATTGCACATTTGCTCGGGACCAGACCTCT
CCCAGTATATAGCGTGTTCTTGCTCTTGAAAACGGGCATGAACTTTGGAA
TAGGAGTCGGTACCCTCGTCGAAGCATCACTCGGTTGTGCCCTCGCAATT
GCAGTTGCTTCGTTTGGGGGTACCATACATGAGCGCGTATACTTTCCTGC
TTTTCGTGGTAGGGAAGGCGAGGAAACCAGTGATAATAACCTCACTGGGA
GTATCCATACCCACACTGTATCCGTGCTCATGATACTTGGTTGTACCGTA
CTTTTCCCCCTTTAAGCCGCCACTTAAGCGTGACGGCACAATTTGTTGAC
CTCCTATCCCACAACACAGAGTCCGTACATGTATGTGCGGGGCAAGCCCA
CAGTGGATGGCTTTTTCGCGACCCCGGTAAAGCACTTTGGTGCGCCGGGA
ATTCCTAGCGCCGATGAGATTATACGGGTCACCGTCTTCCCCACGACGTC
AATTGAGGTGCACGCCGAACAGCCGGGTGGCGTCATTTCTCCAGATCTTC
TGGACAGGTGGGATAATGCAGTTGTCGGACTTTCGAGGTGTGAGGGGAGG
GATACGTTTGTCAAAAGTTTTTGTCGTACTTGCTGTGCCTTGATTTTTTT
GTTATATATATCACAATACCCTGACACCCTTTAAAATCGCATCCTCTGAT
ATCACTTTTCAAATTCGATTTTCTGTAGAACTACGAGCCTGCACAGCTGG
AACAGAAGGTCTATCGAAACACCTCGACGAGACCTTTCCAATGATGCCGT
TATCGGTGTCATGAGCATCGTCGTCGTTGACAAAATCGAGTCCGAAAAAT
AGTATCAGGGATTACGATATCAAACGGTATTTAGGCATCGCAAATATCCA
TAATATAGAATTATTGTAAGCATAGGAACGTTATCAGTTAGAAGGAGCAT
CGATGAGATGGCTTCGCCGAGGAACGTGGCACACGCGCGCTTTGTTGACT
TTTTATGCCATGTTCGGCAGATACTCAAGTGGGCGCTTCTTGGAGCTCCT
GAATTATGCTCTGAACCCCGGAAACGAGGTCCTTACTGAAGAACTTTTCA
ACGCCGGGTTCGAATCCGGTGCGTATGTTGTTTTTTGGGAGGGTTTGGGG
ACGGCTGGACACATGGCGGAGAGGTAAAGGAAAATCCCCCCTTTTTTGCT
TCTCATGTCTGATTGAACTACGATACGTTGTTCTTGTGAAAGAGTTCGCG
CTGTGTGTGGTTGAGAAGACCTCCTCAATAAGCTAGCTATCATACATTCT
ATTCTCCACAACACATTTGCGACAGCGCTTCCTCTTTCCTTGTCGATAGT
TCACATTTTCTCACGTTTTTTCTACTACGATTTGTGTGACAGCGCTTACG
CTCTCTGGACGATGACTCAGGGCTCAACTCCCTCCCTCACCGTTTTTTTT
TGCTTGCTGATCTCGTATACCGTACGTGTGCCCATTCGTTGCTCCCAGGA
AGTGTCTGGTGTGAAAGGTATGGTGATGCCTGCAGGAAGAGGCACGAGGA
GAGACATGGATCAAGCGAGGTGGCC
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Coding sequence (CDS) from alignment at H-paniculata_contig632:10384..15408-

>mRNA_H-paniculata_contig632.14110.1 ID=mRNA_H-paniculata_contig632.14110.1|Name=mRNA_H-paniculata_contig632.14110.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2124bp|location=Sequence derived from alignment at H-paniculata_contig632:10384..15408- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACGTGATCAGTTTCCCAAGCAGTATCTACCCCGTAACCGATCTCACTTG
TAACTACATGGTGCAATGCAGCAGTATGTCGCAAGTTGTGTACAAGTACA
GCTTCTTCTTGGGTACGGCAGGTTTTTGTCAAGCATTTTCGCGCCACATT
AGTTTTCAGCCCCAAGCGGTTACTAGCAAGCTGACATCGGCAGGTGTCTC
CTGCCGTGCTCTGTCTCACGATGTCGCAAGTAGTGTCAACTATCTACCCC
CAACCCTCACTAGTAAAGTGGGAATCTCTTTCACTCCCGGAGGCTTGCTC
TTCCCGTATCATCTCGGGGTGGCTAAGTGCTTGGCGAAAAATGGCTTGTT
GGCGACAGACACTTCATTGGCGGGTGCTTCCGCAGGAACGTGATCAGTTT
CCCAAGCAGTATCTACCCCGTAACCGATCTCACTTGTAACTACATGGTGC
AATGCAGCAGTATGTCGCAAGTTGTGTACAAGTACAGCTTCTTCTTGGGT
ACGGCAGGTTTTTGTCAAGCATTTTCGCGCCACATTAGTTTTCAGCCCCA
AGCGGTTACTAGCAAGCTGACATCGGCAGGTGTCTCCTGCCGTGCTCTGT
CTCACGATGTCGCAAGTAGTGTCAACTATCTACCCCCAACCCTCACTAGT
AAAGTGGGAATCTCTTTCACTCCCGGAGGCTTGCTCTTCCCGTATCATCT
CGGGGTGGCTAAGTGCTTGGCGAAAAATGGCTTGTTGGCGACAGACACTT
CATTGGCGGGTGCTTCCGCAGGAGCGCTCGCCGCGGCGGTTGTAGGGTGC
GGTTTGGATATTAATATGGCCAAGAAGCTGGCTGGCTCAGTTTTCAAGGA
GTGCAGGAACGGTGGCCCGGCCTTCAGACTAAAAGCGCTCGCCGCGGCGG
TTGTAGGGTGCGGTTTGGATATTAATATGGCCAAGAAGCTGGCTGGCTCA
GTTTTCAAGGAGTGCAGGAACGGTGGCCCGGCCTTCAGACTAAAGGACAT
CGTGGCACGAGGGCTCGATAACGCACTGCCGGAAAATGCTCACGACATCC
TGAACAAAAGAGAAGGAAGGGTTACTATTGGTGTAACCGAACTGTTCCCG
CGACCCAAAGGTATCTTCGTCAGCGAGTTCTCATCGAAGGAGGACCTCAT
CGAGGTTTTGCTCGGATCATGGGACATCGTGGCACGAGGGCTCGATAACG
CACTGCCGGAAAATGCTCACGACATCCTGAACAAAAGAGAAGGAAGGGTT
ACTATTGGTGTAACCGAACTGTTCCCGCGACCCAAAGGTATCTTCGTCAG
CGAGTTCTCATCGAAGGAGGACCTCATCGAGGTTTTGCTCGGATCATGCC
ATGTGCCGTTTTGGTTCAGTGGGCCATGTGCCGTTTTGGTTCAGTGGGAG
TCCGTACATGTATGTGCGGGGCAAGCCCACAGTGGATGGCTTTTTCGCGA
CCCCGGTAAAGCACTTTGGTGCGCCGGGAATTCCTAGCGCCGATGAGATT
ATACGGGTCACCGTCTTCCCCACGACGTCAATTGAGGTGCACGCCGAACA
GCCGGGTGGCGTCATTTCTCCAGATCTTCTGGACAGAGTCCGTACATGTA
TGTGCGGGGCAAGCCCACAGTGGATGGCTTTTTCGCGACCCCGGTAAAGC
ACTTTGGTGCGCCGGGAATTCCTAGCGCCGATGAGATTATACGGGTCACC
GTCTTCCCCACGACGTCAATTGAGGTGCACGCCGAACAGCCGGGTGGCGT
CATTTCTCCAGATCTTCTGGACAGATACTCAAGTGGGCGCTTCTTGGAGC
TCCTGAATTATGCTCTGAACCCCGGAAACGAGGTCCTTACTGAAGAACTT
TTCAACGCCGGGTTCGAATCCGGTGCATACTCAAGTGGGCGCTTCTTGGA
GCTCCTGAATTATGCTCTGAACCCCGGAAACGAGGTCCTTACTGAAGAAC
TTTTCAACGCCGGGTTCGAATCCGGTGCTGTCTGGTGTGAAAGGTATGGT
GATGCCTGCAGGAAGAGGCACGAGGAGAGACATGGATCAAGCGAGGTGGC
CTGTCTGGTGTGAAAGGTATGGTGATGCCTGCAGGAAGAGGCACGAGGAG
AGACATGGATCAAGCGAGGTGGCC
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