prot_H-paniculata_contig63166.14105.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig63166.14105.1
Unique Nameprot_H-paniculata_contig63166.14105.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Match: A0A6S7J544_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J544_PARCT)

HSP 1 Score: 58.5 bits (140), Expect = 1.480e-8
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   11 GKLGVCSAFEKGKASKQPIKNYREERTTE-LKLVHTDIVGPVN-KSFGGRRFTIIFVDDYSR 70
            GKL  C A  +GKA + P K   E ++T  L+LVH+D+ GP+  +SFGG ++ + F+DDYSR
Sbjct:   58 GKLSFCVACAEGKAHRAPFKPVGEIKSTRRLELVHSDVAGPMKTESFGGAKYFVTFIDDYSR 119          
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Match: A0A6S7FZB6_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FZB6_PARCT)

HSP 1 Score: 58.9 bits (141), Expect = 1.780e-8
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   11 GKLGVCSAFEKGKASKQPIKNYREERTTE-LKLVHTDIVGPVN-KSFGGRRFTIIFVDDYSR 70
            GKL VC    +GKA + P K   E ++T  L+LVH+D+ GP+  +SFGG ++ + F+DDYSR
Sbjct:  431 GKLSVCEPCAEGKAHRAPFKPAGEIKSTRRLELVHSDVAGPMKTESFGGAKYFVTFIDDYSR 492          
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Match: A0A7D9IUM0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUM0_PARCT)

HSP 1 Score: 58.5 bits (140), Expect = 2.400e-8
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    7 IRLNGKLGVCSAFEKGKASKQPIKNYREERTTE-LKLVHTDIVGPVN-KSFGGRRFTIIFVDDYSR 70
            I   GKL  C A  +G A + P K   E ++T  L+LVH+D+ GP+  +SFGG ++ + F+DDYSR
Sbjct:  289 IPRTGKLSFCEACAEGMAHRAPFKQVGEIKSTRRLELVHSDVAGPMKTESFGGAKYFVTFIDDYSR 354          
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Match: A0A7D9DC69_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DC69_PARCT)

HSP 1 Score: 57.0 bits (136), Expect = 8.540e-8
Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   11 GKLGVCSAFEKGKASKQPIKNYREERTTE-LKLVHTDIVGPVN-KSFGGRRFTIIFVDDYSR 70
            GKL  C A  +GK+ + P K   E ++ + L+LVH+D+ GP+  +SFGG R+ + F+DDYSR
Sbjct:  428 GKLDFCEACAEGKSHRAPFKPVGEVQSKKRLQLVHSDVAGPMKTESFGGARYFVTFIDDYSR 489          
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Match: UPI0008FCEF38 (probable receptor-like protein kinase At5g47070 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FCEF38)

HSP 1 Score: 56.2 bits (134), Expect = 1.580e-7
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 0
Query:   13 LGVCSAFEKGKASKQPIKNYREERTTELKLVHTDIVGPVNKS-FGGRRFTIIFVDDYSR 70
            LGVC    KGK +K  +K      T  L+L+HTDI GP + S +GG R+ I F+DDYSR
Sbjct:   69 LGVCIDCIKGKQTKHTVKKAATRSTQLLELIHTDICGPFDISTWGGERYFITFIDDYSR 127          
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Match: A0A7D9EW89_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EW89_PARCT)

HSP 1 Score: 55.8 bits (133), Expect = 2.200e-7
Identity = 28/62 (45.16%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   11 GKLGVCSAFEKGKASKQPIKNYREERTTE-LKLVHTDIVGPVN-KSFGGRRFTIIFVDDYSR 70
            GKL  C A  +GK+ + P K   E ++ + L+LVH D+ GP+  +SFGG R+ + F+DDYSR
Sbjct:  283 GKLDFCEACAEGKSHRAPFKPVGEVQSKKRLQLVHGDVTGPMKTESFGGARYFVTFIDDYSR 344          
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Match: A0A0A9Y2Q7_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y2Q7_LYGHE)

HSP 1 Score: 55.1 bits (131), Expect = 3.960e-7
Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   15 VCSAFEKGKASKQPIKNYREERTTE--LKLVHTDIVGPVNKSFGGRRFTIIFVDDYSR 70
            +C +  KGK S++P    + +   E  L LVH+DI+GPV+ SF GR++ + F+DD+SR
Sbjct:  263 LCVSCVKGKQSRKPFPRDKNKTVAENPLDLVHSDILGPVDPSFSGRKYLLTFIDDFSR 320          
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Match: A0A146LFV8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LFV8_LYGHE)

HSP 1 Score: 55.1 bits (131), Expect = 4.090e-7
Identity = 25/58 (43.10%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   15 VCSAFEKGKASKQPIKNYREERTTE--LKLVHTDIVGPVNKSFGGRRFTIIFVDDYSR 70
            +C +  KGK S++P    + +   E  L LVH+DI+GPV+ SF GR++ + F+DD+SR
Sbjct:  449 LCVSCVKGKQSRKPFPRDKNKTVAENPLDLVHSDILGPVDPSFSGRKYLLTFIDDFSR 506          
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Match: UPI0015D8DD40 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI0015D8DD40)

HSP 1 Score: 52.8 bits (125), Expect = 4.860e-7
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0
Query:   11 GKLGVCSAFEKGKASKQPIKNYREERTTELKLVHTDIVGPVN-KSFGGRRFTIIFVDDYSR 70
            G+L VC +  +GK +K+     RE     L+LVH+D+ GP+N K+ GG  + + F+DD+SR
Sbjct:   31 GELPVCESCLEGKMTKRSFSAKRERAKQPLRLVHSDVCGPLNVKARGGYEYFVTFIDDFSR 91          
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Match: A0A7D9EA89_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EA89_PARCT)

HSP 1 Score: 54.7 bits (130), Expect = 5.500e-7
Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   11 GKLGVCSAFEKGKASKQPIKNYREERTTE-LKLVHTDIVGPVN-KSFGGRRFTIIFVDDYSR 70
            GKL  C A  +GK+ + P K   E ++ + L+LVH+D+ GP+  +SFGG R+ +  +DDYSR
Sbjct:  275 GKLDFCEACAEGKSHRAPFKPVGEVQSKKRLQLVHSDVAGPMKTESFGGARYFVTLIDDYSR 336          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig63166.14105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S7J544_PARCT1.480e-846.77Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7FZB6_PARCT1.780e-846.77Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9IUM0_PARCT2.400e-843.94Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9DC69_PARCT8.540e-845.16Retrovirus-related Pol poly from transposon TNT 1-... [more]
UPI0008FCEF381.580e-749.15probable receptor-like protein kinase At5g47070 n=... [more]
A0A7D9EW89_PARCT2.200e-745.16Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A0A9Y2Q7_LYGHE3.960e-743.10Retrovirus-related Pol polyprotein from transposon... [more]
A0A146LFV8_LYGHE4.090e-743.10Retrovirus-related Pol polyprotein from transposon... [more]
UPI0015D8DD404.860e-740.98hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
A0A7D9EA89_PARCT5.500e-743.55Retrovirus-related Pol poly from transposon TNT 1-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig63166contigH-paniculata_contig63166:137..346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig63166.14105.1mRNA_H-paniculata_contig63166.14105.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig63166 137..346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig63166.14105.1 ID=prot_H-paniculata_contig63166.14105.1|Name=mRNA_H-paniculata_contig63166.14105.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
VARQQGIRLNGKLGVCSAFEKGKASKQPIKNYREERTTELKLVHTDIVGP
VNKSFGGRRFTIIFVDDYSR
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