mRNA_H-paniculata_contig6294.14064.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Match: D7FXK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK8_ECTSI) HSP 1 Score: 139 bits (351), Expect = 1.800e-36 Identity = 67/97 (69.07%), Postives = 79/97 (81.44%), Query Frame = 1
Query: 496 MCGVDGVVST-DKRPSTWSNVGGEDLVKLAEDVYAAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVELDGPLRKALDKVGPVMHIVSPNYEHVK*A 783
M G G ++T +R TWSN G+D+V++ DV+ AERPFVWNGIDVGGRMAVVKLSDGSLWVHSPV+LD PL++AL +GPV HIVSPNYEHVK A
Sbjct: 2 MSGGSGAITTAGRREMTWSNPMGDDMVQVLGDVWCAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYA 98
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Match: A0A812QRP3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812QRP3_9DINO) HSP 1 Score: 127 bits (318), Expect = 5.930e-32 Identity = 61/97 (62.89%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 535 PSTWSNVGGEDLVKLAEDVYAAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVELDGPLRKALDKVGPVMHIVSPNYEHVK*A--------DVTLQG 801
PSTWSN G L L D++ AERPF+WN IDVGG+MAVV+L DG LWVHSPVELD LR+AL+++GPV HIVSPN+EHVK A D TL G
Sbjct: 17 PSTWSNPSGSVLTALNTDLWVAERPFIWNSIDVGGKMAVVRLPDGGLWVHSPVELDEELREALEQLGPVRHIVSPNFEHVKWAAQWKAAFPDATLWG 113
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Match: A0A835ZG26_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG26_9STRA) HSP 1 Score: 122 bits (307), Expect = 6.130e-30 Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 1
Query: 532 RPSTWSNVGGEDLVKLAEDVYAAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVELDGPLRKALDKVGPVMHIVSPNYEHVK*A 783
R TWSN G DL + +V+ AERPF+WN IDVGGRM V+KL DGSLWVHSPVELD L++ L ++GPV H+VSPNYEHVK A
Sbjct: 20 RDKTWSNPKGLDLTPIKHNVWGAERPFIWNTIDVGGRMTVIKLEDGSLWVHSPVELDPALQQTLAELGPVRHVVSPNYEHVKYA 103
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Match: A0A1Q9E991_SYMMI (Uncharacterized protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9E991_SYMMI) HSP 1 Score: 127 bits (320), Expect = 6.190e-30 Identity = 62/97 (63.92%), Postives = 70/97 (72.16%), Query Frame = 1
Query: 535 PSTWSNVGGEDLVKLAEDVYAAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVELDGPLRKALDKVGPVMHIVSPNYEHVK*A--------DVTLQG 801
PSTWSN G L L D++ AERPF+WN IDVGG+MAVV+L DG LWVHSPVELD LR ALD++GPV HIVSPN+EHVK A D TL G
Sbjct: 312 PSTWSNPSGSVLTALNTDLWVAERPFIWNSIDVGGKMAVVRLPDGGLWVHSPVELDEELRDALDQLGPVRHIVSPNFEHVKWAAQWKEAFPDATLWG 408
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Match: A0A7S4C8N9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8N9_9EUGL) HSP 1 Score: 128 bits (321), Expect = 6.460e-30 Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 1
Query: 535 PSTWSNVGGEDLVKLAEDVYAAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVELDGPLRKALDKVGPVMHIVSPNYEHVK*A 783
PS WSN G E L K+A D++ AERPF+WN IDVGG+MAVV+L+DGSLWVHSPVELD PL+ AL +GPV +I+SPNYEHVK A
Sbjct: 173 PSEWSNPGKEVLKKVAPDLWVAERPFIWNSIDVGGKMAVVRLADGSLWVHSPVELDAPLKAALAALGPVKYIMSPNYEHVKYA 255
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Match: A0A812Q2U2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812Q2U2_9DINO) HSP 1 Score: 123 bits (309), Expect = 9.440e-30 Identity = 59/97 (60.82%), Postives = 69/97 (71.13%), Query Frame = 1
Query: 535 PSTWSNVGGEDLVKLAEDVYAAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVELDGPLRKALDKVGPVMHIVSPNYEHVK*A--------DVTLQG 801
P TWSN G L L D++ AERPF+WN IDVGG+MAVV+L DG LWVHSPV+LD LRK L+++GPV HIVSPN+EHVK A D TL G
Sbjct: 78 PQTWSNPTGSVLTALNTDLWVAERPFIWNSIDVGGKMAVVRLPDGGLWVHSPVDLDEELRKGLEQLGPVRHIVSPNFEHVKWAAQWKGAFPDATLWG 174
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Match: A0A6H5JZT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT7_9PHAE) HSP 1 Score: 117 bits (293), Expect = 1.030e-28 Identity = 67/146 (45.89%), Postives = 80/146 (54.79%), Query Frame = 1
Query: 496 MCGVDGVVST-DKRPSTWSNVGGEDLVKLAEDVYAAERPFVWNGIDVGG-------------------------------------------------RMAVVKLSDGSLWVHSPVELDGPLRKALDKVGPVMHIVSPNYEHVK*A 783
M G G ++T +R +TWSN G+D+V++ DV+ AERPFVWNGIDVGG RMAVVKLSDGSLWVHSPV+LD PL++AL +GPV HIVSPNYEHVK A
Sbjct: 2 MSGGGGAITTAGRRETTWSNPTGDDIVQVLGDVWCAERPFVWNGIDVGGCSAAINLLIIMLVVQSKRLEVGKNPGVSRLMCVLMTTHTNIHLAEVKGGRMAVVKLSDGSLWVHSPVDLDEPLKEALASLGPVGHIVSPNYEHVKYA 147
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Match: A0A7S0DC47_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0DC47_MICPS) HSP 1 Score: 119 bits (298), Expect = 3.320e-28 Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 541 TWSNVGGEDLVKLAEDV-YAAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVELDGPLRKALDKVGPVMHIVSPNYEHVK*A--------DVTLQG 801
TWSN G+ L + + V +AAERPF WN IDVGG+M VVKL DG+LWVHSPV+LD P +KA+D +GPV H+VSPNYEHVK A D TL G
Sbjct: 63 TWSNPTGQVLTPVVDGVVWAAERPFTWNTIDVGGKMGVVKLEDGALWVHSPVDLDAPTKKAVDALGPVRHVVSPNYEHVKWAAQWKEAYPDATLWG 158
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Match: A0A8J9RQ74_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RQ74_9CHLO) HSP 1 Score: 117 bits (292), Expect = 1.150e-27 Identity = 54/82 (65.85%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 538 STWSNVGGEDLVKLAEDVYAAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVELDGPLRKALDKVGPVMHIVSPNYEHVK*A 783
ST++N G+ L +LA +V+AA+RPF+WN IDVGGRMAV+KLSDGS+WVHSPV+LD L AL ++G V HIVSPNYEH K A
Sbjct: 35 STFTNTSGKVLQQLAPNVWAADRPFIWNRIDVGGRMAVLKLSDGSIWVHSPVQLDDDLAAALGELGEVKHIVSPNYEHTKYA 116
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Match: A0A0G4F7M5_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F7M5_9ALVE) HSP 1 Score: 115 bits (289), Expect = 1.000e-26 Identity = 65/145 (44.83%), Postives = 82/145 (56.55%), Query Frame = 1
Query: 358 PAVSLRHAVSPQTRK-SERGIWRSPASVDRGAFDNEHDRPSTVKTVAMCGVDGVVSTDKRP--STWSNVGGEDLVKLAEDVYAAERPFVWNGIDVGGRMAVVKLSDGSLWVHSPVELDGPLRKALDKVGPVMHIVSPNYEHVK*A 783
P R SP +R S RG + A R A + D P GV S P TWSN GE L ++ + ++ A+RPF+WN IDVGG+MAVV+L DG+LWVHSPV D L +AL K G + H+VSPN+EHVK A
Sbjct: 32 PKFFRRPRPSPPSRSPSPRGSLTATAEDTRSAREKAPDEP------------GVSSESAEPLQKTWSNQKGEVLCRVTDSIWYADRPFIWNKIDVGGKMAVVRLRDGTLWVHSPVAFDRTLAEALGKAGRIKHLVSPNFEHVKFA 164 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6294.14064.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6294.14064.1 >prot_H-paniculata_contig6294.14064.1 ID=prot_H-paniculata_contig6294.14064.1|Name=mRNA_H-paniculata_contig6294.14064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp MMRSPASRPSPRAAAAFTLMACYLLILPTSLQAFLPSPAVSLRHAVSPQTback to top mRNA from alignment at H-paniculata_contig6294:7005..10171+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6294.14064.1 ID=mRNA_H-paniculata_contig6294.14064.1|Name=mRNA_H-paniculata_contig6294.14064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3167bp|location=Sequence derived from alignment at H-paniculata_contig6294:7005..10171+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6294:7005..10171+ >mRNA_H-paniculata_contig6294.14064.1 ID=mRNA_H-paniculata_contig6294.14064.1|Name=mRNA_H-paniculata_contig6294.14064.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig6294:7005..10171+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |