prot_H-paniculata_contig62936.14063.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig62936.14063.1
Unique Nameprot_H-paniculata_contig62936.14063.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Match: A0A6B7EUY5_9PHAE (Uncharacterized protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EUY5_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.600e-33
Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 0
Query:    1 MTFFSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSIDKLIQILTVLYFIVAICYVIQSYF 73
            MTFFSLFSILLNILLI IILIRSPNEQSLQENL PFKLFESSRRAETSIDKL+QILT+LYF +AICYVI SYF
Sbjct:    1 MTFFSLFSILLNILLILIILIRSPNEQSLQENLIPFKLFESSRRAETSIDKLLQILTILYFTIAICYVIGSYF 73          
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Match: D1J765_ECTSI (Uncharacterized protein ycf47 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J765_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 6.560e-29
Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    2 TFFSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSIDKLIQILTVLYFIVAICYVIQSYF 73
            T FS+ SILLNILLISIILIRSPNEQSLQENL PFK FESS RAE SIDKLIQILT+ YFI+A+ Y+IQSYF
Sbjct:    5 TIFSIISILLNILLISIILIRSPNEQSLQENLAPFKFFESSSRAEKSIDKLIQILTIFYFIIALIYIIQSYF 76          
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Match: A0A5A4MI59_9PHAE (Uncharacterized protein n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MI59_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.550e-27
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    1 MTFFSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSIDKLIQILTVLYFIVAICYVIQSYF 73
            MT F + SILLNILLI +IL+RSPNEQSLQENL PFKLFESS RAE SIDK IQ+LTVLYF++A+ YVIQSYF
Sbjct:    4 MTIFGVLSILLNILLILVILVRSPNEQSLQENLAPFKLFESSSRAEKSIDKFIQLLTVLYFLLALIYVIQSYF 76          
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Match: A0A344PF79_9PHAE (Uncharacterized protein n=1 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A344PF79_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 5.180e-26
Identity = 55/73 (75.34%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    1 MTFFSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSIDKLIQILTVLYFIVAICYVIQSYF 73
            MT F + SI+LNILLI IILIRSPNEQSLQENL PF+LFESS RAE SIDK+IQ+LT+ YF++A+ YVIQSYF
Sbjct:    4 MTLFGILSIMLNILLILIILIRSPNEQSLQENLAPFRLFESSSRAEKSIDKVIQLLTIGYFLLALLYVIQSYF 76          
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Match: A0A0R6LUQ0_UNDPI (Probable protein-export membrane protein SecG n=23 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUQ0_UNDPI)

HSP 1 Score: 96.3 bits (238), Expect = 1.220e-24
Identity = 52/70 (74.29%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    4 FSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSIDKLIQILTVLYFIVAICYVIQSYF 73
            FS+ SI+LN  L+ IIL+RSPNEQSLQENL PFKLFESS RAE SIDKLIQILT+LYF++A+ Y IQ YF
Sbjct:    7 FSILSIILNFSLVLIILVRSPNEQSLQENLDPFKLFESSSRAEKSIDKLIQILTILYFVLALVYTIQRYF 76          
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Match: A0A8F0F7T2_9PHAE (Probable protein-export membrane protein SecG n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7T2_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 3.500e-24
Identity = 52/70 (74.29%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    4 FSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSIDKLIQILTVLYFIVAICYVIQSYF 73
            FSL SI  NILLI +IL+RSPNEQSLQENL P KLFESS +AE SIDKLIQIL + YF++A+CY IQSYF
Sbjct:    7 FSLLSITSNILLILVILVRSPNEQSLQENLDPLKLFESSSKAEKSIDKLIQILAIFYFVLALCYNIQSYF 76          
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Match: A0A141BSB1_9PHAE (Probable protein-export membrane protein SecG n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSB1_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 8.860e-22
Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 MTFFSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSIDKLIQILTVLYFIVAICYVIQSY 72
            M FFS+ SI++N  L+ IILIRSPNEQSLQENL PFK+FESS +AE SID LI+ILT++YF +A+ Y I++Y
Sbjct:    1 MKFFSIISIIVNFFLVLIILIRSPNEQSLQENLDPFKIFESSSKAENSIDNLIKILTIIYFSIALAYNIKNY 72          
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Match: A0A8F0F9M4_9PHAE (Uncharacterized protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9M4_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 4.560e-20
Identity = 46/73 (63.01%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    1 MTFFSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSIDKLIQILTVLYFIVAICYVIQSYF 73
            M  F + + +LNI+LI +IL+RSPNEQSLQENL PF LFESS RAE SID+LI+ LT +YF +A+ Y IQ YF
Sbjct:    4 MNIFGILTTILNIVLILVILVRSPNEQSLQENLDPFNLFESSSRAEKSIDRLIKRLTFMYFFLALFYAIQGYF 76          
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Match: A0A2R4QPS9_9PHAE (Hypothetical chloroplast protein ycf47 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPS9_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 6.470e-20
Identity = 49/71 (69.01%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    3 FFSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSIDKLIQILTVLYFIVAICYVIQSYF 73
            F S+ SI +NI+LI IILIRSPNEQSLQENL PFK FESS +AE  ID LIQIL VLYF +A+ Y I++YF
Sbjct:    6 FLSIISIGINIILIFIILIRSPNEQSLQENLDPFKFFESSSKAEIFIDNLIQILVVLYFSLALLYNIKNYF 76          
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Match: A0A8F0FBW8_9PHAE (Uncharacterized protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FBW8_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 2.160e-18
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    1 MTFFSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSIDKLIQILTVLYFIVAICYVIQSYF 73
            M  F + SI+LNI      +IRSPNEQSLQENL PF+LFESS +AE SIDK I++LT LYFI+ I Y +Q YF
Sbjct:    4 MNVFGIISIVLNIXXXXXXIIRSPNEQSLQENLAPFQLFESSTKAEESIDKFIRLLTALYFILGIFYSLQKYF 76          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig62936.14063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6B7EUY5_9PHAE1.600e-3390.41Uncharacterized protein n=1 Tax=Cladosiphon okamur... [more]
D1J765_ECTSI6.560e-2981.94Uncharacterized protein ycf47 n=2 Tax=Ectocarpus s... [more]
A0A5A4MI59_9PHAE1.550e-2778.08Uncharacterized protein n=4 Tax=Scytosiphonaceae T... [more]
A0A344PF79_9PHAE5.180e-2675.34Uncharacterized protein n=1 Tax=Endarachne bingham... [more]
A0A0R6LUQ0_UNDPI1.220e-2474.29Probable protein-export membrane protein SecG n=23... [more]
A0A8F0F7T2_9PHAE3.500e-2474.29Probable protein-export membrane protein SecG n=2 ... [more]
A0A141BSB1_9PHAE8.860e-2265.28Probable protein-export membrane protein SecG n=14... [more]
A0A8F0F9M4_9PHAE4.560e-2063.01Uncharacterized protein n=1 Tax=Chorda asiatica Ta... [more]
A0A2R4QPS9_9PHAE6.470e-2069.01Hypothetical chloroplast protein ycf47 n=3 Tax=Fuc... [more]
A0A8F0FBW8_9PHAE2.160e-1861.64Uncharacterized protein n=1 Tax=Desmarestia aculea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
NoneNo IPR availableTMHMMTMhelixcoord: 4..21
NoneNo IPR availableTMHMMTMhelixcoord: 52..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig62936contigH-paniculata_contig62936:521..742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig62936.14063.1mRNA_H-paniculata_contig62936.14063.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig62936 521..751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig62936.14063.1 ID=prot_H-paniculata_contig62936.14063.1|Name=mRNA_H-paniculata_contig62936.14063.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
MTFFSLFSILLNILLISIILIRSPNEQSLQENLTPFKLFESSRRAETSID
KLIQILTVLYFIVAICYVIQSYF*
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